RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 WDFY4Q6ZS81 3184 aa0.74□□□□□ -2.29
C11orf88-204ENST00000529661 CELSR3Q9NYQ7 3312 aa0.74□□□□□ -2.29
C11orf88-204ENST00000529661 LINC01549A6NIU2 74 aa0.74□□□□□ -2.29
C11orf88-204ENST00000529661 NDUFA3O95167 84 aa0.74□□□□□ -2.29
C11orf88-204ENST00000529661 LELP1Q5T871 98 aa0.74□□□□□ -2.29
C11orf88-204ENST00000529661 CROCC2H7BZ55 1655 aa0.74□□□□□ -2.29
C11orf88-204ENST00000529661 CSMD3Q7Z407 3707 aa0.73□□□□□ -2.29
C11orf88-204ENST00000529661 MYO9AB2RTY4 2548 aa0.73□□□□□ -2.29
C11orf88-204ENST00000529661 MUC2Q02817 5179 aa0.73□□□□□ -2.29
C11orf88-204ENST00000529661 CCDC168Q8NDH2 2452 aa0.73□□□□□ -2.29
C11orf88-204ENST00000529661 ZFHX4Q86UP3 3567 aa0.73□□□□□ -2.29
C11orf88-204ENST00000529661 SMIM5Q71RC9 77 aa0.73□□□□□ -2.29
C11orf88-204ENST00000529661 FXYD6Q9H0Q3 95 aa0.73□□□□□ -2.29
C11orf88-204ENST00000529661 KNL1Q8NG31 2342 aa0.73□□□□□ -2.29
C11orf88-204ENST00000529661 FLNCQ14315 2725 aa0.73□□□□□ -2.29
C11orf88-204ENST00000529661 KIF1AQ12756 1690 aa0.72□□□□□ -2.29
C11orf88-204ENST00000529661 TENM4Q6N022 2769 aa0.72□□□□□ -2.29
C11orf88-204ENST00000529661 KLK9Q2XQG4 91 aa0.72□□□□□ -2.29
C11orf88-204ENST00000529661 SPTA1P02549 2419 aa0.72□□□□□ -2.29
C11orf88-204ENST00000529661 SZT2Q5T011 3432 aa0.71□□□□□ -2.3
C11orf88-204ENST00000529661 LAMA2P24043 3122 aaKnown RBP0.71□□□□□ -2.3
C11orf88-204ENST00000529661 IGSF10Q6WRI0 2623 aa0.71□□□□□ -2.3
C11orf88-204ENST00000529661 CSPG4Q6UVK1 2322 aa0.71□□□□□ -2.3
C11orf88-204ENST00000529661 KIAA1109Q2LD37 5005 aa0.71□□□□□ -2.3
C11orf88-204ENST00000529661 SPINK1P00995 79 aa0.71□□□□□ -2.3
C11orf88-204ENST00000529661 PRO3102Q9H379 93 aa0.71□□□□□ -2.3
C11orf88-204ENST00000529661 FLNAP21333 2647 aaKnown RBP0.7□□□□□ -2.3
C11orf88-204ENST00000529661 VCANP13611 3396 aa0.7□□□□□ -2.3
C11orf88-204ENST00000529661 REV3LO60673 3130 aa0.7□□□□□ -2.3
C11orf88-204ENST00000529661 WNK2Q9Y3S1 2297 aa0.7□□□□□ -2.3
C11orf88-204ENST00000529661 MROH2AA6NES4 1674 aa0.7□□□□□ -2.3
C11orf88-204ENST00000529661 ETDCA0A1B0GVM5 59 aa0.7□□□□□ -2.3
C11orf88-204ENST00000529661 WFDC13Q8IUB5 93 aa0.7□□□□□ -2.3
C11orf88-204ENST00000529661 PDZD2O15018 2839 aa0.7□□□□□ -2.3
C11orf88-204ENST00000529661 MAP1BP46821 2468 aaKnown RBP0.7□□□□□ -2.3
C11orf88-204ENST00000529661 PRXQ9BXM0 1461 aa0.69□□□□□ -2.3
C11orf88-204ENST00000529661 ATRQ13535 2644 aa0.69□□□□□ -2.3
C11orf88-204ENST00000529661 EEA1Q15075 1411 aa0.69□□□□□ -2.3
C11orf88-204ENST00000529661 MACF1Q9UPN3 7388 aaKnown RBP0.69□□□□□ -2.3
C11orf88-204ENST00000529661 HIVEP3Q5T1R4 2406 aa0.68□□□□□ -2.3
C11orf88-204ENST00000529661 ZFYVE26Q68DK2 2539 aa0.68□□□□□ -2.3
C11orf88-204ENST00000529661 NBEAL1Q6ZS30 2694 aa0.68□□□□□ -2.3
C11orf88-204ENST00000529661 LINC00158P58513 81 aa0.67□□□□□ -2.3
C11orf88-204ENST00000529661 CFAP47Q6ZTR5 3102 aa0.67□□□□□ -2.3
C11orf88-204ENST00000529661 CFAP46Q8IYW2 2715 aa0.67□□□□□ -2.3
C11orf88-204ENST00000529661 USP9YO00507 2555 aaPredicted RBP0.67□□□□□ -2.3
C11orf88-204ENST00000529661 PKD1L1Q8TDX9 2849 aa0.66□□□□□ -2.3
C11orf88-204ENST00000529661 UBR5O95071 2799 aaPredicted RBP0.66□□□□□ -2.3
C11orf88-204ENST00000529661 ANKRD36CQ5JPF3 1778 aa0.66□□□□□ -2.3
C11orf88-204ENST00000529661 CEP295Q9C0D2 2601 aa0.66□□□□□ -2.3
C11orf88-204ENST00000529661 SYCP2Q9BX26 1530 aa0.66□□□□□ -2.3
C11orf88-204ENST00000529661 H0YAA0 97 aa0.66□□□□□ -2.3
C11orf88-204ENST00000529661 CRIP1P50238 77 aa0.66□□□□□ -2.3
C11orf88-204ENST00000529661 U3KQA8 63 aa0.66□□□□□ -2.3
C11orf88-204ENST00000529661 CREBBPQ92793 2442 aa0.66□□□□□ -2.3
C11orf88-204ENST00000529661 ITSN2Q9NZM3 1697 aa0.65□□□□□ -2.3
C11orf88-204ENST00000529661 PDE4DIPQ5VU43 2346 aa0.65□□□□□ -2.3
C11orf88-204ENST00000529661 KIAA0586Q9BVV6 1533 aa0.65□□□□□ -2.31
C11orf88-204ENST00000529661 SPG11Q96JI7 2443 aa0.65□□□□□ -2.31
C11orf88-204ENST00000529661 LYNX1G3V0Z9 82 aa0.65□□□□□ -2.31
C11orf88-204ENST00000529661 AKAP13Q12802 2813 aa0.65□□□□□ -2.31
C11orf88-204ENST00000529661 OTOGQ6ZRI0 2925 aa0.65□□□□□ -2.31
C11orf88-204ENST00000529661 ZANQ9Y493 2812 aa0.64□□□□□ -2.31
C11orf88-204ENST00000529661 K7EMI3 77 aa0.64□□□□□ -2.31
C11orf88-204ENST00000529661 UTP20O75691 2785 aaKnown RBP0.64□□□□□ -2.31
C11orf88-204ENST00000529661 MUC5ACP98088 5654 aa0.64□□□□□ -2.31
C11orf88-204ENST00000529661 TENM2Q9NT68 2774 aa0.63□□□□□ -2.31
C11orf88-204ENST00000529661 UGGT1Q9NYU2 1555 aa0.63□□□□□ -2.31
C11orf88-204ENST00000529661 DNAH12Q6ZR08 3092 aa0.63□□□□□ -2.31
C11orf88-204ENST00000529661 KRTAP20-1Q3LI63 56 aa0.63□□□□□ -2.31
C11orf88-204ENST00000529661 RANBP2P49792 3224 aaKnown RBP0.63□□□□□ -2.31
C11orf88-204ENST00000529661 FSIP2Q5CZC0 6907 aa0.63□□□□□ -2.31
C11orf88-204ENST00000529661 CPS1P31327 1500 aa0.63□□□□□ -2.31
C11orf88-204ENST00000529661 EYSQ5T1H1 3165 aa0.63□□□□□ -2.31
C11orf88-204ENST00000529661 NSD1Q96L73 2696 aaPredicted RBP0.62□□□□□ -2.31
C11orf88-204ENST00000529661 ACACBO00763 2458 aa0.62□□□□□ -2.31
C11orf88-204ENST00000529661 TEX15Q9BXT5 2789 aa0.62□□□□□ -2.31
C11orf88-204ENST00000529661 TOGARAM1Q9Y4F4 1720 aa0.61□□□□□ -2.31
C11orf88-204ENST00000529661 ITPR1Q14643 2758 aa0.61□□□□□ -2.31
C11orf88-204ENST00000529661 TLN1Q9Y490 2541 aaKnown RBP0.61□□□□□ -2.31
C11orf88-204ENST00000529661 RYR1P21817 5038 aa0.6□□□□□ -2.31
C11orf88-204ENST00000529661 SERF2P84101 59 aa0.6□□□□□ -2.31
C11orf88-204ENST00000529661 RYR2Q92736 4967 aa0.6□□□□□ -2.31
C11orf88-204ENST00000529661 MKI67P46013 3256 aaKnown RBP0.6□□□□□ -2.31
C11orf88-204ENST00000529661 SPEGQ15772 3267 aa0.6□□□□□ -2.31
C11orf88-204ENST00000529661 BSNQ9UPA5 3926 aa0.6□□□□□ -2.31
C11orf88-204ENST00000529661 SPTAN1Q13813 2472 aaKnown RBP0.6□□□□□ -2.31
C11orf88-204ENST00000529661 ADCY10Q96PN6 1610 aa0.6□□□□□ -2.31
C11orf88-204ENST00000529661 TLN2Q9Y4G6 2542 aa0.6□□□□□ -2.31
C11orf88-204ENST00000529661 MXRA5Q9NR99 2828 aa0.6□□□□□ -2.31
C11orf88-204ENST00000529661 BOD1L1Q8NFC6 3051 aa0.59□□□□□ -2.31
C11orf88-204ENST00000529661 CDC42BPAQ5VT25 1732 aa0.59□□□□□ -2.31
C11orf88-204ENST00000529661 NMES1Q9C002 83 aa0.59□□□□□ -2.31
C11orf88-204ENST00000529661 SONP18583 2426 aaKnown RBP0.59□□□□□ -2.32
C11orf88-204ENST00000529661 CSMD1Q96PZ7 3565 aa0.59□□□□□ -2.32
C11orf88-204ENST00000529661 NBEAQ8NFP9 2946 aa0.58□□□□□ -2.32
C11orf88-204ENST00000529661 SYNE2Q8WXH0 6885 aaKnown RBP0.58□□□□□ -2.32
C11orf88-204ENST00000529661 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
C11orf88-204ENST00000529661 NCBP2-AS2Q69YL0 99 aa0.58□□□□□ -2.32
C11orf88-204ENST00000529661 EP300Q09472 2414 aaPredicted RBP0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms