RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 TMEM126AQ9H061 195 aa2.43□□□□□ -2.02
CSDE1-212ENST00000529046 TMEM218A2RU14 115 aa2.42□□□□□ -2.02
CSDE1-212ENST00000529046 SPINK8P0C7L1 97 aa2.42□□□□□ -2.02
CSDE1-212ENST00000529046 SCGB1A1P11684 91 aa2.42□□□□□ -2.02
CSDE1-212ENST00000529046 S100PP25815 95 aa2.42□□□□□ -2.02
CSDE1-212ENST00000529046 RPS29P62273 56 aaKnown RBP2.42□□□□□ -2.02
CSDE1-212ENST00000529046 ZNF625Q96I27 306 aaPredicted RBP2.42□□□□□ -2.02
CSDE1-212ENST00000529046 SEC11CQ9BY50 192 aa2.42□□□□□ -2.02
CSDE1-212ENST00000529046 ERG28Q9UKR5 140 aa2.42□□□□□ -2.02
CSDE1-212ENST00000529046 LOC107984156A0A0G2JMH3 177 aa2.41□□□□□ -2.02
CSDE1-212ENST00000529046 LST1O00453 97 aa2.41□□□□□ -2.02
CSDE1-212ENST00000529046 SPINK1P00995 79 aa2.41□□□□□ -2.02
CSDE1-212ENST00000529046 ZNF22P17026 224 aaPredicted RBP2.41□□□□□ -2.02
CSDE1-212ENST00000529046 SPRR1AP35321 89 aa2.41□□□□□ -2.02
CSDE1-212ENST00000529046 ASB16-AS1Q495Z4 193 aa2.41□□□□□ -2.02
CSDE1-212ENST00000529046 ARL17AQ8IVW1 177 aa2.41□□□□□ -2.02
CSDE1-212ENST00000529046 KCNQ1DNQ9H478 68 aa2.41□□□□□ -2.02
CSDE1-212ENST00000529046 SMCO4Q9NRQ5 59 aa2.41□□□□□ -2.02
CSDE1-212ENST00000529046 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.03
CSDE1-212ENST00000529046 TRAV12-1A0A0B4J245 112 aa2.4□□□□□ -2.03
CSDE1-212ENST00000529046 A8MUN3 132 aa2.4□□□□□ -2.03
CSDE1-212ENST00000529046 LINC00587B1AMM8 73 aa2.4□□□□□ -2.03
CSDE1-212ENST00000529046 NDUFC2O95298 119 aa2.4□□□□□ -2.03
CSDE1-212ENST00000529046 PRLHP81277 87 aa2.4□□□□□ -2.03
CSDE1-212ENST00000529046 C10orf91Q5T1B1 145 aa2.4□□□□□ -2.03
CSDE1-212ENST00000529046 MIR7-3HGQ8N6C7 128 aa2.4□□□□□ -2.03
CSDE1-212ENST00000529046 SPRR4Q96PI1 79 aa2.4□□□□□ -2.03
CSDE1-212ENST00000529046 MUC17Q685J3 4493 aa2.39□□□□□ -2.03
CSDE1-212ENST00000529046 A8MUU9 505 aa2.39□□□□□ -2.03
CSDE1-212ENST00000529046 HBDP02042 147 aa2.39□□□□□ -2.03
CSDE1-212ENST00000529046 RHEBQ15382 184 aa2.39□□□□□ -2.03
CSDE1-212ENST00000529046 SSBP3-AS1Q7Z2R9 100 aa2.39□□□□□ -2.03
CSDE1-212ENST00000529046 C3orf22Q8N5N4 141 aa2.39□□□□□ -2.03
CSDE1-212ENST00000529046 Q8NDZ9 215 aa2.39□□□□□ -2.03
CSDE1-212ENST00000529046 C18orf32Q8TCD1 76 aa2.39□□□□□ -2.03
CSDE1-212ENST00000529046 RETNLBQ9BQ08 111 aa2.39□□□□□ -2.03
CSDE1-212ENST00000529046 TRBV10-2A0A0K0K1G8 114 aa2.38□□□□□ -2.03
CSDE1-212ENST00000529046 C11orf86A6NJI1 115 aa2.38□□□□□ -2.03
CSDE1-212ENST00000529046 A8MWP4 228 aa2.38□□□□□ -2.03
CSDE1-212ENST00000529046 LINC00158P58513 81 aa2.38□□□□□ -2.03
CSDE1-212ENST00000529046 TMEM170BQ5T4T1 132 aa2.38□□□□□ -2.03
CSDE1-212ENST00000529046 BAGE3Q86Y29 109 aa2.38□□□□□ -2.03
CSDE1-212ENST00000529046 FAM19A2Q8N3H0 131 aa2.38□□□□□ -2.03
CSDE1-212ENST00000529046 SPANXA2-OT1Q8N9U9 137 aa2.38□□□□□ -2.03
CSDE1-212ENST00000529046 CHCHD1Q96BP2 118 aaKnown RBP2.38□□□□□ -2.03
CSDE1-212ENST00000529046 A6NED7 52 aa2.37□□□□□ -2.03
CSDE1-212ENST00000529046 SLC25A20O43772 301 aa2.37□□□□□ -2.03
CSDE1-212ENST00000529046 NDUFA6P56556 154 aa2.37□□□□□ -2.03
CSDE1-212ENST00000529046 ADM2Q7Z4H4 148 aa2.37□□□□□ -2.03
CSDE1-212ENST00000529046 SMCR5Q8TEV8 140 aa2.37□□□□□ -2.03
CSDE1-212ENST00000529046 HIGD2AQ9BW72 106 aa2.37□□□□□ -2.03
CSDE1-212ENST00000529046 NDUFA12Q9UI09 145 aa2.37□□□□□ -2.03
CSDE1-212ENST00000529046 TRAPPC1Q9Y5R8 145 aa2.37□□□□□ -2.03
CSDE1-212ENST00000529046 MYMXA0A1B0GTQ4 84 aa2.36□□□□□ -2.03
CSDE1-212ENST00000529046 ETDCA0A1B0GVM5 59 aa2.36□□□□□ -2.03
CSDE1-212ENST00000529046 MEIG1Q5JSS6 88 aa2.36□□□□□ -2.03
CSDE1-212ENST00000529046 DAND5Q8N907 189 aa2.36□□□□□ -2.03
CSDE1-212ENST00000529046 IFI27L1Q96BM0 104 aa2.36□□□□□ -2.03
CSDE1-212ENST00000529046 A0A1B0GW54 56 aa2.35□□□□□ -2.03
CSDE1-212ENST00000529046 IGLV6-57P01721 117 aa2.35□□□□□ -2.03
CSDE1-212ENST00000529046 SMIM13P0DJ93 91 aa2.35□□□□□ -2.03
CSDE1-212ENST00000529046 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
CSDE1-212ENST00000529046 SLC25A34Q6PIV7 304 aa2.35□□□□□ -2.03
CSDE1-212ENST00000529046 Q6Q795 121 aa2.35□□□□□ -2.03
CSDE1-212ENST00000529046 Q6ZRX8 168 aa2.35□□□□□ -2.03
CSDE1-212ENST00000529046 FSIP2Q5CZC0 6907 aa2.35□□□□□ -2.03
CSDE1-212ENST00000529046 TRBV10-3A0A0K0K1G6 114 aa2.34□□□□□ -2.03
CSDE1-212ENST00000529046 LEPROTO15243 131 aa2.34□□□□□ -2.03
CSDE1-212ENST00000529046 SPRR1BP22528 89 aa2.34□□□□□ -2.03
CSDE1-212ENST00000529046 PLNP26678 52 aa2.34□□□□□ -2.03
CSDE1-212ENST00000529046 TSPEAR-AS2P59090 65 aa2.34□□□□□ -2.03
CSDE1-212ENST00000529046 PMCHL1Q16048 86 aa2.34□□□□□ -2.03
CSDE1-212ENST00000529046 SVBPQ8N300 66 aa2.34□□□□□ -2.03
CSDE1-212ENST00000529046 Q9BRP9 147 aa2.34□□□□□ -2.03
CSDE1-212ENST00000529046 KRTAP4-1Q9BYQ7 146 aa2.34□□□□□ -2.03
CSDE1-212ENST00000529046 A0A0B4J2C4 111 aa2.33□□□□□ -2.04
CSDE1-212ENST00000529046 NCR3O14931 201 aa2.33□□□□□ -2.04
CSDE1-212ENST00000529046 ERC2-IT1O76042 136 aa2.33□□□□□ -2.04
CSDE1-212ENST00000529046 NDUFA5Q16718 116 aa2.33□□□□□ -2.04
CSDE1-212ENST00000529046 Q5XG85 94 aa2.33□□□□□ -2.04
CSDE1-212ENST00000529046 ST20-AS1Q8NBB2 130 aa2.33□□□□□ -2.04
CSDE1-212ENST00000529046 J3QQQ9 107 aa2.32□□□□□ -2.04
CSDE1-212ENST00000529046 ZNF73O43830 326 aaPredicted RBP2.32□□□□□ -2.04
CSDE1-212ENST00000529046 APOC3P02656 99 aa2.32□□□□□ -2.04
CSDE1-212ENST00000529046 HIST1H2BOP23527 126 aa2.32□□□□□ -2.04
CSDE1-212ENST00000529046 HIST1H2BBP33778 126 aa2.32□□□□□ -2.04
CSDE1-212ENST00000529046 HINT1P49773 126 aaPredicted RBP2.32□□□□□ -2.04
CSDE1-212ENST00000529046 HIST1H2BDP58876 126 aa2.32□□□□□ -2.04
CSDE1-212ENST00000529046 HIST1H2BCP62807 126 aa2.32□□□□□ -2.04
CSDE1-212ENST00000529046 HIST2H2BEQ16778 126 aa2.32□□□□□ -2.04
CSDE1-212ENST00000529046 KRTAP19-2Q3LHN2 52 aa2.32□□□□□ -2.04
CSDE1-212ENST00000529046 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.32□□□□□ -2.04
CSDE1-212ENST00000529046 LYRM7Q5U5X0 104 aa2.32□□□□□ -2.04
CSDE1-212ENST00000529046 HIST1H2BHQ93079 126 aa2.32□□□□□ -2.04
CSDE1-212ENST00000529046 HIST1H2BNQ99877 126 aa2.32□□□□□ -2.04
CSDE1-212ENST00000529046 HIST1H2BMQ99879 126 aa2.32□□□□□ -2.04
CSDE1-212ENST00000529046 MIEN1Q9BRT3 115 aa2.32□□□□□ -2.04
CSDE1-212ENST00000529046 LIMD2Q9BT23 127 aa2.32□□□□□ -2.04
CSDE1-212ENST00000529046 IMUPQ9GZP8 106 aa2.32□□□□□ -2.04
CSDE1-212ENST00000529046 TRAV23DV6A0A075B6W5 121 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms