RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 CACNA1BQ00975 2339 aa2.13□□□□□ -2.07
CLNS1A-209ENST00000527299 USP34Q70CQ2 3546 aa2.13□□□□□ -2.07
CLNS1A-209ENST00000527299 NBEAQ8NFP9 2946 aa2.12□□□□□ -2.07
CLNS1A-209ENST00000527299 LY6G6CO95867 125 aa2.12□□□□□ -2.07
CLNS1A-209ENST00000527299 CAMK2N1Q7Z7J9 78 aa2.12□□□□□ -2.07
CLNS1A-209ENST00000527299 C16orf74Q96GX8 76 aa2.12□□□□□ -2.07
CLNS1A-209ENST00000527299 Q96NJ1 140 aa2.12□□□□□ -2.07
CLNS1A-209ENST00000527299 CFAP54Q96N23 3096 aa2.12□□□□□ -2.07
CLNS1A-209ENST00000527299 WDFY4Q6ZS81 3184 aa2.12□□□□□ -2.07
CLNS1A-209ENST00000527299 GPR179Q6PRD1 2367 aa2.12□□□□□ -2.07
CLNS1A-209ENST00000527299 ZZEF1O43149 2961 aa2.11□□□□□ -2.07
CLNS1A-209ENST00000527299 C15orf56Q8N910 161 aa2.11□□□□□ -2.07
CLNS1A-209ENST00000527299 C5orf42Q9H799 3197 aa2.11□□□□□ -2.07
CLNS1A-209ENST00000527299 PTPRZ1P23471 2315 aaPredicted RBP2.11□□□□□ -2.07
CLNS1A-209ENST00000527299 CHD7Q9P2D1 2997 aa2.1□□□□□ -2.07
CLNS1A-209ENST00000527299 VPS13AQ96RL7 3174 aa2.1□□□□□ -2.07
CLNS1A-209ENST00000527299 NBDYA0A0U1RRE5 68 aa2.1□□□□□ -2.07
CLNS1A-209ENST00000527299 LYNX1P0DP58 116 aa2.1□□□□□ -2.07
CLNS1A-209ENST00000527299 NOP10Q9NPE3 64 aaKnown RBP2.1□□□□□ -2.07
CLNS1A-209ENST00000527299 ACACAQ13085 2346 aa2.09□□□□□ -2.07
CLNS1A-209ENST00000527299 H3BUX3 64 aa2.09□□□□□ -2.07
CLNS1A-209ENST00000527299 SSBP3-AS1Q7Z2R9 100 aa2.09□□□□□ -2.07
CLNS1A-209ENST00000527299 MRPL34Q9BQ48 92 aaKnown RBP2.09□□□□□ -2.07
CLNS1A-209ENST00000527299 AKAP6Q13023 2319 aa2.09□□□□□ -2.07
CLNS1A-209ENST00000527299 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.09□□□□□ -2.072e-13■■■■■ 31.7
CLNS1A-209ENST00000527299 IGF2RP11717 2491 aa2.09□□□□□ -2.08
CLNS1A-209ENST00000527299 MAP1BP46821 2468 aaKnown RBP2.09□□□□□ -2.08
CLNS1A-209ENST00000527299 RP1L1Q8IWN7 2480 aaPredicted RBP2.09□□□□□ -2.08
CLNS1A-209ENST00000527299 DMDP11532 3685 aa2.09□□□□□ -2.08
CLNS1A-209ENST00000527299 EPG5Q9HCE0 2579 aa2.08□□□□□ -2.08
CLNS1A-209ENST00000527299 ATRXP46100 2492 aa2.08□□□□□ -2.08
CLNS1A-209ENST00000527299 NCOR2Q9Y618 2525 aa2.08□□□□□ -2.08
CLNS1A-209ENST00000527299 H0YAA0 97 aa2.08□□□□□ -2.08
CLNS1A-209ENST00000527299 BRD3OSQ6XYD6 125 aa2.08□□□□□ -2.08
CLNS1A-209ENST00000527299 PSORS1C2Q9UIG4 136 aa2.08□□□□□ -2.08
CLNS1A-209ENST00000527299 MYO15AQ9UKN7 3530 aa2.08□□□□□ -2.08
CLNS1A-209ENST00000527299 CFAP47Q6ZTR5 3102 aa2.08□□□□□ -2.08
CLNS1A-209ENST00000527299 PKD1L2Q7Z442 2459 aa2.08□□□□□ -2.08
CLNS1A-209ENST00000527299 TPRP12270 2363 aaKnown RBP2.07□□□□□ -2.08
CLNS1A-209ENST00000527299 ZDBF2Q9HCK1 2354 aa2.07□□□□□ -2.08
CLNS1A-209ENST00000527299 SPRR1BP22528 89 aa2.07□□□□□ -2.08
CLNS1A-209ENST00000527299 REV3LO60673 3130 aa2.07□□□□□ -2.08
CLNS1A-209ENST00000527299 ZNF292O60281 2723 aa2.07□□□□□ -2.08
CLNS1A-209ENST00000527299 ROS1P08922 2347 aa2.07□□□□□ -2.08
CLNS1A-209ENST00000527299 NCOR1O75376 2440 aa2.07□□□□□ -2.08
CLNS1A-209ENST00000527299 DNAH14Q0VDD8 3507 aa2.07□□□□□ -2.08
CLNS1A-209ENST00000527299 ANKRD11Q6UB99 2663 aaPredicted RBP2.06□□□□□ -2.08
CLNS1A-209ENST00000527299 TRANK1O15050 2925 aa2.06□□□□□ -2.08
CLNS1A-209ENST00000527299 A0A1W2PNN7 141 aa2.06□□□□□ -2.08
CLNS1A-209ENST00000527299 PRO0255Q9UI72 69 aa2.06□□□□□ -2.08
CLNS1A-209ENST00000527299 CHD6Q8TD26 2715 aa2.06□□□□□ -2.08
CLNS1A-209ENST00000527299 DCHS1Q96JQ0 3298 aa2.06□□□□□ -2.08
CLNS1A-209ENST00000527299 SPTA1P02549 2419 aa2.05□□□□□ -2.08
CLNS1A-209ENST00000527299 RIF1Q5UIP0 2472 aaKnown RBP2.05□□□□□ -2.08
CLNS1A-209ENST00000527299 A0A0G2JQZ4 141 aa2.05□□□□□ -2.08
CLNS1A-209ENST00000527299 TPRXLQ17RH7 258 aa2.05□□□□□ -2.08
CLNS1A-209ENST00000527299 Q6ZSA8 131 aa2.05□□□□□ -2.08
CLNS1A-209ENST00000527299 C4orf3Q8WVX3 66 aa2.05□□□□□ -2.08
CLNS1A-209ENST00000527299 SPTBN4Q9H254 2564 aa2.05□□□□□ -2.08
CLNS1A-209ENST00000527299 BAHCC1Q9P281 2608 aa2.05□□□□□ -2.08
CLNS1A-209ENST00000527299 TRIOO75962 3097 aa2.05□□□□□ -2.08
CLNS1A-209ENST00000527299 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
CLNS1A-209ENST00000527299 ACACBO00763 2458 aa2.04□□□□□ -2.08
CLNS1A-209ENST00000527299 FRYLO94915 3013 aa2.04□□□□□ -2.08
CLNS1A-209ENST00000527299 GIG44P09565 113 aaPredicted RBP2.04□□□□□ -2.08
CLNS1A-209ENST00000527299 DEFB136Q30KP8 78 aa2.04□□□□□ -2.08
CLNS1A-209ENST00000527299 LELP1Q5T871 98 aa2.04□□□□□ -2.08
CLNS1A-209ENST00000527299 EP300Q09472 2414 aaPredicted RBP2.03□□□□□ -2.08
CLNS1A-209ENST00000527299 GVINP1Q7Z2Y8 2422 aa2.03□□□□□ -2.08
CLNS1A-209ENST00000527299 C2CD3Q4AC94 2353 aa2.03□□□□□ -2.08
CLNS1A-209ENST00000527299 FRYQ5TBA9 3013 aa2.03□□□□□ -2.08
CLNS1A-209ENST00000527299 KALRNO60229 2985 aa2.03□□□□□ -2.08
CLNS1A-209ENST00000527299 SETXQ7Z333 2677 aaKnown RBP2.03□□□□□ -2.08
CLNS1A-209ENST00000527299 FLNBO75369 2602 aaKnown RBP2.03□□□□□ -2.08
CLNS1A-209ENST00000527299 A0A1B0GU33 70 aa2.03□□□□□ -2.08
CLNS1A-209ENST00000527299 LY6EQ16553 131 aa2.03□□□□□ -2.08
CLNS1A-209ENST00000527299 DEFB124Q8NES8 71 aa2.03□□□□□ -2.08
CLNS1A-209ENST00000527299 CRIPTQ9P021 101 aa2.03□□□□□ -2.08
CLNS1A-209ENST00000527299 CACNA1HO95180 2353 aa2.03□□□□□ -2.08
CLNS1A-209ENST00000527299 DMXL1Q9Y485 3027 aa2.02□□□□□ -2.09
CLNS1A-209ENST00000527299 J3QKU1 62 aa2.02□□□□□ -2.09
CLNS1A-209ENST00000527299 H1FX-AS1Q4G0G2 97 aa2.02□□□□□ -2.09
CLNS1A-209ENST00000527299 ASPMQ8IZT6 3477 aa2.02□□□□□ -2.09
CLNS1A-209ENST00000527299 UNC79Q9P2D8 2635 aa2.02□□□□□ -2.09
CLNS1A-209ENST00000527299 TENM2Q9NT68 2774 aa2.01□□□□□ -2.09
CLNS1A-209ENST00000527299 K7EIL1 84 aa2.01□□□□□ -2.09
CLNS1A-209ENST00000527299 PP632Q6XCG6 107 aa2.01□□□□□ -2.09
CLNS1A-209ENST00000527299 COX6B2Q6YFQ2 88 aa2.01□□□□□ -2.09
CLNS1A-209ENST00000527299 FASNP49327 2511 aaKnown RBP2□□□□□ -2.09
CLNS1A-209ENST00000527299 SPEGQ15772 3267 aa2□□□□□ -2.09
CLNS1A-209ENST00000527299 USP24Q9UPU5 2620 aa2□□□□□ -2.09
CLNS1A-209ENST00000527299 ASH1LQ9NR48 2969 aaKnown RBP1.99□□□□□ -2.09
CLNS1A-209ENST00000527299 A0A096LPF7 62 aa1.99□□□□□ -2.09
CLNS1A-209ENST00000527299 DEFB130BP0DP73 79 aa1.99□□□□□ -2.09
CLNS1A-209ENST00000527299 DEFB130AP0DP74 79 aa1.99□□□□□ -2.09
CLNS1A-209ENST00000527299 C10orf99Q6UWK7 81 aa1.99□□□□□ -2.09
CLNS1A-209ENST00000527299 CEP295Q9C0D2 2601 aa1.99□□□□□ -2.09
CLNS1A-209ENST00000527299 AKAP13Q12802 2813 aa1.99□□□□□ -2.09
CLNS1A-209ENST00000527299 ZFYVE26Q68DK2 2539 aa1.98□□□□□ -2.09
CLNS1A-209ENST00000527299 OTOGQ6ZRI0 2925 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms