RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 TLN2Q9Y4G6 2542 aa1.17□□□□□ -2.22
TRAPPC4-207ENST00000526141 COL6A6A6NMZ7 2263 aa1.17□□□□□ -2.22
TRAPPC4-207ENST00000526141 HMCN1Q96RW7 5635 aa1.17□□□□□ -2.22
TRAPPC4-207ENST00000526141 ESPL1Q14674 2120 aa1.16□□□□□ -2.22
TRAPPC4-207ENST00000526141 CELSR2Q9HCU4 2923 aa1.16□□□□□ -2.22
TRAPPC4-207ENST00000526141 TGP01266 2768 aa1.16□□□□□ -2.22
TRAPPC4-207ENST00000526141 ANGP03950 147 aaKnown RBP1.16□□□□□ -2.22
TRAPPC4-207ENST00000526141 SPINK7P58062 85 aa1.16□□□□□ -2.22
TRAPPC4-207ENST00000526141 KRTAP12-4P60329 112 aa1.16□□□□□ -2.22
TRAPPC4-207ENST00000526141 GNGT1P63211 74 aa1.16□□□□□ -2.22
TRAPPC4-207ENST00000526141 ATP5EP2Q5VTU8 51 aa1.16□□□□□ -2.22
TRAPPC4-207ENST00000526141 C6orf201Q7Z4U5 140 aa1.16□□□□□ -2.22
TRAPPC4-207ENST00000526141 CSMD2Q7Z408 3487 aa1.16□□□□□ -2.22
TRAPPC4-207ENST00000526141 MYO7AQ13402 2215 aa1.16□□□□□ -2.22
TRAPPC4-207ENST00000526141 ACACAQ13085 2346 aa1.16□□□□□ -2.22
TRAPPC4-207ENST00000526141 ANKRD36CQ5JPF3 1778 aa1.16□□□□□ -2.22
TRAPPC4-207ENST00000526141 TANC1Q9C0D5 1861 aa1.16□□□□□ -2.22
TRAPPC4-207ENST00000526141 CUBNO60494 3623 aa1.15□□□□□ -2.22
TRAPPC4-207ENST00000526141 BSNQ9UPA5 3926 aa1.15□□□□□ -2.22
TRAPPC4-207ENST00000526141 MED13LQ71F56 2210 aa1.15□□□□□ -2.23
TRAPPC4-207ENST00000526141 TRBV6-1A0A0K0K1D8 114 aa1.15□□□□□ -2.23
TRAPPC4-207ENST00000526141 A0A1B0GUT8 65 aa1.15□□□□□ -2.23
TRAPPC4-207ENST00000526141 SIPA1L3O60292 1781 aaPredicted RBP1.15□□□□□ -2.23
TRAPPC4-207ENST00000526141 ASCC3Q8N3C0 2202 aaKnown RBP1.15□□□□□ -2.23
TRAPPC4-207ENST00000526141 ASXL3Q9C0F0 2248 aa1.15□□□□□ -2.23
TRAPPC4-207ENST00000526141 NIPBLQ6KC79 2804 aaeCLIP1.14□□□□□ -2.23
TRAPPC4-207ENST00000526141 KRTAP12-3P60328 96 aa1.14□□□□□ -2.23
TRAPPC4-207ENST00000526141 HAMPP81172 84 aa1.14□□□□□ -2.23
TRAPPC4-207ENST00000526141 KRTAP21-3Q3LHN1 58 aa1.14□□□□□ -2.23
TRAPPC4-207ENST00000526141 CRCT1Q9UGL9 99 aa1.14□□□□□ -2.23
TRAPPC4-207ENST00000526141 PARP14Q460N5 1801 aa1.14□□□□□ -2.23
TRAPPC4-207ENST00000526141 KIF20BQ96Q89 1820 aa1.14□□□□□ -2.23
TRAPPC4-207ENST00000526141 RYR2Q92736 4967 aa1.14□□□□□ -2.23
TRAPPC4-207ENST00000526141 DOCK11Q5JSL3 2073 aa1.13□□□□□ -2.23
TRAPPC4-207ENST00000526141 TRBV7-4A0A0J9YYF1 115 aa1.13□□□□□ -2.23
TRAPPC4-207ENST00000526141 IFI27P40305 119 aaPredicted RBP1.13□□□□□ -2.23
TRAPPC4-207ENST00000526141 Q6ZSA8 131 aa1.13□□□□□ -2.23
TRAPPC4-207ENST00000526141 UBE2DNLQ8IWF7 75 aa1.13□□□□□ -2.23
TRAPPC4-207ENST00000526141 CACNA1EQ15878 2313 aa1.13□□□□□ -2.23
TRAPPC4-207ENST00000526141 ANK2Q01484 3957 aa1.13□□□□□ -2.23
TRAPPC4-207ENST00000526141 MEGF8Q7Z7M0 2845 aa1.13□□□□□ -2.23
TRAPPC4-207ENST00000526141 COL6A5A8TX70 2615 aa1.13□□□□□ -2.23
TRAPPC4-207ENST00000526141 MGAM2Q2M2H8 2515 aa1.13□□□□□ -2.23
TRAPPC4-207ENST00000526141 ACANP16112 2415 aa1.13□□□□□ -2.23
TRAPPC4-207ENST00000526141 DOCK2Q92608 1830 aa1.12□□□□□ -2.23
TRAPPC4-207ENST00000526141 APCP25054 2843 aa1.12□□□□□ -2.23
TRAPPC4-207ENST00000526141 S100ZQ8WXG8 99 aa1.12□□□□□ -2.23
TRAPPC4-207ENST00000526141 VPS13CQ709C8 3753 aa1.12□□□□□ -2.23
TRAPPC4-207ENST00000526141 NBASA2RRP1 2371 aa1.12□□□□□ -2.23
TRAPPC4-207ENST00000526141 SPTBP11277 2137 aa1.12□□□□□ -2.23
TRAPPC4-207ENST00000526141 PRKDCP78527 4128 aaKnown RBP1.12□□□□□ -2.23
TRAPPC4-207ENST00000526141 NSD1Q96L73 2696 aaPredicted RBP1.12□□□□□ -2.23
TRAPPC4-207ENST00000526141 AHCTF1Q8WYP5 2266 aa1.12□□□□□ -2.23
TRAPPC4-207ENST00000526141 ZNF469Q96JG9 3925 aaPredicted RBP1.11□□□□□ -2.23
TRAPPC4-207ENST00000526141 FLG2Q5D862 2391 aaPredicted RBP1.11□□□□□ -2.23
TRAPPC4-207ENST00000526141 A0A087WXM4 84 aa1.11□□□□□ -2.23
TRAPPC4-207ENST00000526141 NDUFB1O75438 58 aa1.11□□□□□ -2.23
TRAPPC4-207ENST00000526141 S100A3P33764 101 aa1.11□□□□□ -2.23
TRAPPC4-207ENST00000526141 DCHS2Q6V1P9 2916 aa1.1□□□□□ -2.23
TRAPPC4-207ENST00000526141 HERC2O95714 4834 aa1.1□□□□□ -2.23
TRAPPC4-207ENST00000526141 KIAA1109Q2LD37 5005 aa1.1□□□□□ -2.23
TRAPPC4-207ENST00000526141 A0A087WWC5 75 aa1.1□□□□□ -2.23
TRAPPC4-207ENST00000526141 A0A1B0GU69 56 aa1.1□□□□□ -2.23
TRAPPC4-207ENST00000526141 SPINK9Q5DT21 86 aa1.1□□□□□ -2.23
TRAPPC4-207ENST00000526141 SSBP3-AS1Q7Z2R9 100 aa1.1□□□□□ -2.23
TRAPPC4-207ENST00000526141 SVEP1Q4LDE5 3571 aa1.1□□□□□ -2.23
TRAPPC4-207ENST00000526141 CSPG4Q6UVK1 2322 aa1.1□□□□□ -2.23
TRAPPC4-207ENST00000526141 VWFP04275 2813 aa1.09□□□□□ -2.23
TRAPPC4-207ENST00000526141 MXRA5Q9NR99 2828 aa1.09□□□□□ -2.23
TRAPPC4-207ENST00000526141 NCOA6Q14686 2063 aaPredicted RBP1.09□□□□□ -2.24
TRAPPC4-207ENST00000526141 ABCA1O95477 2261 aa1.09□□□□□ -2.24
TRAPPC4-207ENST00000526141 PRRC2CQ9Y520 2896 aaKnown RBP1.09□□□□□ -2.24
TRAPPC4-207ENST00000526141 DLG5Q8TDM6 1919 aa1.09□□□□□ -2.24
TRAPPC4-207ENST00000526141 TENM1Q9UKZ4 2725 aa1.09□□□□□ -2.24
TRAPPC4-207ENST00000526141 TACC2O95359 2948 aa1.09□□□□□ -2.24
TRAPPC4-207ENST00000526141 ABCA13Q86UQ4 5058 aa1.09□□□□□ -2.24
TRAPPC4-207ENST00000526141 TRAV21A0A0B4J279 112 aa1.08□□□□□ -2.24
TRAPPC4-207ENST00000526141 ARL14EPLP0DKL9 152 aa1.08□□□□□ -2.24
TRAPPC4-207ENST00000526141 COX8AP10176 69 aa1.08□□□□□ -2.24
TRAPPC4-207ENST00000526141 KRTAP4-1Q9BYQ7 146 aa1.08□□□□□ -2.24
TRAPPC4-207ENST00000526141 URB1O60287 2271 aaKnown RBP1.08□□□□□ -2.24
TRAPPC4-207ENST00000526141 DEFB112Q30KQ8 113 aa1.07□□□□□ -2.24
TRAPPC4-207ENST00000526141 LINC00959A0A1B0GUT2 108 aa1.06□□□□□ -2.24
TRAPPC4-207ENST00000526141 IFI6P09912 130 aa1.06□□□□□ -2.24
TRAPPC4-207ENST00000526141 GAFA1Q96PS6 74 aa1.06□□□□□ -2.24
TRAPPC4-207ENST00000526141 WNK1Q9H4A3 2382 aa1.06□□□□□ -2.24
TRAPPC4-207ENST00000526141 F5P12259 2224 aa1.05□□□□□ -2.24
TRAPPC4-207ENST00000526141 CNTRLQ7Z7A1 2325 aa1.05□□□□□ -2.24
TRAPPC4-207ENST00000526141 MAP1AP78559 2803 aaPredicted RBP1.05□□□□□ -2.24
TRAPPC4-207ENST00000526141 A0A0D9SFI3 127 aa1.05□□□□□ -2.24
TRAPPC4-207ENST00000526141 LOC730098B7Z3J9 87 aa1.05□□□□□ -2.24
TRAPPC4-207ENST00000526141 H3BVH4 76 aa1.05□□□□□ -2.24
TRAPPC4-207ENST00000526141 HMGA1P17096 107 aaKnown RBP1.05□□□□□ -2.24
TRAPPC4-207ENST00000526141 HILPDAQ9Y5L2 63 aa1.05□□□□□ -2.24
TRAPPC4-207ENST00000526141 PDCD11Q14690 1871 aaKnown RBP1.05□□□□□ -2.24
TRAPPC4-207ENST00000526141 TCHHQ07283 1943 aa1.05□□□□□ -2.24
TRAPPC4-207ENST00000526141 TENM3Q9P273 2699 aa1.04□□□□□ -2.24
TRAPPC4-207ENST00000526141 GOLGA4Q13439 2230 aaKnown RBP1.04□□□□□ -2.24
TRAPPC4-207ENST00000526141 LAMA4Q16363 1823 aa1.04□□□□□ -2.24
TRAPPC4-207ENST00000526141 LCE6AA0A183 80 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms