RNA–Protein interactions for RNA: ENST00000523978.1

EFCAB13-213, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 548 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-213ENST00000523978 IGSF10Q6WRI0 2623 aa2.98□□□□□ -1.93
EFCAB13-213ENST00000523978 DSPP15924 2871 aaKnown RBP2.98□□□□□ -1.93
EFCAB13-213ENST00000523978 NBEAQ8NFP9 2946 aa2.97□□□□□ -1.93
EFCAB13-213ENST00000523978 LOC730098B7Z3J9 87 aa2.97□□□□□ -1.93
EFCAB13-213ENST00000523978 C10orf99Q6UWK7 81 aa2.97□□□□□ -1.93
EFCAB13-213ENST00000523978 PLAC4Q8WY50 150 aa2.97□□□□□ -1.93
EFCAB13-213ENST00000523978 CDKN2A-AS1Q9UH64 79 aa2.97□□□□□ -1.93
EFCAB13-213ENST00000523978 CHD9Q3L8U1 2897 aa2.97□□□□□ -1.93
EFCAB13-213ENST00000523978 PTPRQQ9UMZ3 2332 aa2.97□□□□□ -1.93
EFCAB13-213ENST00000523978 DOPEY2Q9Y3R5 2298 aa2.96□□□□□ -1.93
EFCAB13-213ENST00000523978 Q8N9L7 120 aa2.96□□□□□ -1.94
EFCAB13-213ENST00000523978 PCNX1Q96RV3 2341 aa2.96□□□□□ -1.94
EFCAB13-213ENST00000523978 FBN2P35556 2912 aa2.96□□□□□ -1.94
EFCAB13-213ENST00000523978 CHD7Q9P2D1 2997 aa2.95□□□□□ -1.94
EFCAB13-213ENST00000523978 SMG1Q96Q15 3661 aaKnown RBP2.95□□□□□ -1.94
EFCAB13-213ENST00000523978 SETD2Q9BYW2 2564 aaPredicted RBP2.95□□□□□ -1.94
EFCAB13-213ENST00000523978 IGKV2-28A0A075B6P5 120 aa2.95□□□□□ -1.94
EFCAB13-213ENST00000523978 GVQW2A0A096LPI5 108 aaPredicted RBP2.95□□□□□ -1.94
EFCAB13-213ENST00000523978 IGKV2D-28P01615 120 aa2.95□□□□□ -1.94
EFCAB13-213ENST00000523978 SPG11Q96JI7 2443 aa2.94□□□□□ -1.94
EFCAB13-213ENST00000523978 ABCA2Q9BZC7 2435 aa2.93□□□□□ -1.94
EFCAB13-213ENST00000523978 A0A096LNT2 108 aa2.93□□□□□ -1.94
EFCAB13-213ENST00000523978 DNHD1Q96M86 4753 aa2.92□□□□□ -1.94
EFCAB13-213ENST00000523978 RTTNQ86VV8 2226 aa2.91□□□□□ -1.94
EFCAB13-213ENST00000523978 LYNX1G3V0Z9 82 aa2.91□□□□□ -1.94
EFCAB13-213ENST00000523978 POLR2KP53803 58 aaKnown RBP2.91□□□□□ -1.94
EFCAB13-213ENST00000523978 LINC00575Q6W349 94 aa2.91□□□□□ -1.94
EFCAB13-213ENST00000523978 LRRK2Q5S007 2527 aa2.91□□□□□ -1.94
EFCAB13-213ENST00000523978 TLN1Q9Y490 2541 aaKnown RBP2.91□□□□□ -1.94
EFCAB13-213ENST00000523978 ITPR1Q14643 2758 aa2.91□□□□□ -1.94
EFCAB13-213ENST00000523978 LOC400499M0QZD8 3231 aa2.9□□□□□ -1.94
EFCAB13-213ENST00000523978 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
EFCAB13-213ENST00000523978 FRYLO94915 3013 aa2.9□□□□□ -1.95
EFCAB13-213ENST00000523978 H3BSH0 61 aa2.89□□□□□ -1.95
EFCAB13-213ENST00000523978 KRTAP21-3Q3LHN1 58 aa2.89□□□□□ -1.95
EFCAB13-213ENST00000523978 Q6ZRN7 208 aaPredicted RBP2.89□□□□□ -1.95
EFCAB13-213ENST00000523978 TP53AIP1Q9HCN2 124 aa2.89□□□□□ -1.95
EFCAB13-213ENST00000523978 SHANK1Q9Y566 2161 aa2.88□□□□□ -1.95
EFCAB13-213ENST00000523978 PRB3Q04118 309 aaPredicted RBP2.88□□□□□ -1.95
EFCAB13-213ENST00000523978 PP632Q6XCG6 107 aa2.88□□□□□ -1.95
EFCAB13-213ENST00000523978 AKAP13Q12802 2813 aa2.87□□□□□ -1.95
EFCAB13-213ENST00000523978 RELNP78509 3460 aa2.87□□□□□ -1.95
EFCAB13-213ENST00000523978 FREM2Q5SZK8 3169 aa2.87□□□□□ -1.95
EFCAB13-213ENST00000523978 COL12A1Q99715 3063 aa2.87□□□□□ -1.95
EFCAB13-213ENST00000523978 FN1P02751 2386 aaKnown RBP2.87□□□□□ -1.95
EFCAB13-213ENST00000523978 NBEAL1Q6ZS30 2694 aa2.86□□□□□ -1.95
EFCAB13-213ENST00000523978 URB1O60287 2271 aaKnown RBP2.86□□□□□ -1.95
EFCAB13-213ENST00000523978 DMXL2Q8TDJ6 3036 aa2.86□□□□□ -1.95
EFCAB13-213ENST00000523978 KRTAP13-2Q52LG2 175 aa2.86□□□□□ -1.95
EFCAB13-213ENST00000523978 ABCA1O95477 2261 aa2.86□□□□□ -1.95
EFCAB13-213ENST00000523978 ACACAQ13085 2346 aa2.86□□□□□ -1.95
EFCAB13-213ENST00000523978 F8P00451 2351 aa2.86□□□□□ -1.95
EFCAB13-213ENST00000523978 CADP27708 2225 aa2.85□□□□□ -1.95
EFCAB13-213ENST00000523978 SPINK13Q1W4C9 94 aa2.85□□□□□ -1.95
EFCAB13-213ENST00000523978 PRR9Q5T870 116 aa2.85□□□□□ -1.95
EFCAB13-213ENST00000523978 KNTC1P50748 2209 aa2.85□□□□□ -1.95
EFCAB13-213ENST00000523978 ALMS1Q8TCU4 4167 aa2.84□□□□□ -1.95
EFCAB13-213ENST00000523978 RPL39P62891 51 aaKnown RBP2.84□□□□□ -1.95
EFCAB13-213ENST00000523978 DEFB103AP81534 67 aa2.84□□□□□ -1.95
EFCAB13-213ENST00000523978 COX6B2Q6YFQ2 88 aa2.84□□□□□ -1.95
EFCAB13-213ENST00000523978 CRIPTQ9P021 101 aa2.84□□□□□ -1.95
EFCAB13-213ENST00000523978 MTORP42345 2549 aa2.83□□□□□ -1.96
EFCAB13-213ENST00000523978 IGKV2-24A0A0C4DH68 120 aa2.83□□□□□ -1.96
EFCAB13-213ENST00000523978 K7EQZ3 153 aa2.83□□□□□ -1.96
EFCAB13-213ENST00000523978 APC2O95996 2303 aa2.83□□□□□ -1.96
EFCAB13-213ENST00000523978 AHCTF1Q8WYP5 2266 aa2.82□□□□□ -1.96
EFCAB13-213ENST00000523978 PRCDQ00LT1 54 aa2.82□□□□□ -1.96
EFCAB13-213ENST00000523978 MINOS1Q5TGZ0 78 aa2.82□□□□□ -1.96
EFCAB13-213ENST00000523978 DEFB124Q8NES8 71 aa2.82□□□□□ -1.96
EFCAB13-213ENST00000523978 RPL39LQ96EH5 51 aaKnown RBP2.82□□□□□ -1.96
EFCAB13-213ENST00000523978 SORL1Q92673 2214 aa2.82□□□□□ -1.96
EFCAB13-213ENST00000523978 CACNA1EQ15878 2313 aa2.81□□□□□ -1.96
EFCAB13-213ENST00000523978 ATRQ13535 2644 aa2.81□□□□□ -1.96
EFCAB13-213ENST00000523978 CELSR3Q9NYQ7 3312 aa2.81□□□□□ -1.96
EFCAB13-213ENST00000523978 IGFL1Q6UW32 110 aa2.81□□□□□ -1.96
EFCAB13-213ENST00000523978 C6orf48Q9UBA6 75 aa2.81□□□□□ -1.96
EFCAB13-213ENST00000523978 WDFY3Q8IZQ1 3526 aa2.81□□□□□ -1.96
EFCAB13-213ENST00000523978 NBPF19A0A087WUL8 3843 aa2.8□□□□□ -1.96
EFCAB13-213ENST00000523978 LAMA5O15230 3695 aa2.8□□□□□ -1.96
EFCAB13-213ENST00000523978 NF1P21359 2839 aa2.8□□□□□ -1.96
EFCAB13-213ENST00000523978 COL6A6A6NMZ7 2263 aa2.8□□□□□ -1.96
EFCAB13-213ENST00000523978 NOTCH1P46531 2555 aa2.8□□□□□ -1.96
EFCAB13-213ENST00000523978 SPTBN1Q01082 2364 aaKnown RBP2.79□□□□□ -1.96
EFCAB13-213ENST00000523978 ICE1Q9Y2F5 2266 aa2.79□□□□□ -1.96
EFCAB13-213ENST00000523978 I3L2K1 104 aa2.79□□□□□ -1.96
EFCAB13-213ENST00000523978 RPS27P42677 84 aaKnown RBP2.79□□□□□ -1.96
EFCAB13-213ENST00000523978 PIGYQ3MUY2 71 aa2.79□□□□□ -1.96
EFCAB13-213ENST00000523978 SPINK9Q5DT21 86 aa2.79□□□□□ -1.96
EFCAB13-213ENST00000523978 UBE2DNLQ8IWF7 75 aa2.79□□□□□ -1.96
EFCAB13-213ENST00000523978 MRPL34Q9BQ48 92 aaKnown RBP2.79□□□□□ -1.96
EFCAB13-213ENST00000523978 STAB1Q9NY15 2570 aa2.79□□□□□ -1.96
EFCAB13-213ENST00000523978 IGLV5-48A0A075B6I7 105 aa2.78□□□□□ -1.96
EFCAB13-213ENST00000523978 RPL37P61927 97 aaKnown RBP2.78□□□□□ -1.96
EFCAB13-213ENST00000523978 USMG5Q96IX5 58 aa2.78□□□□□ -1.96
EFCAB13-213ENST00000523978 UTP20O75691 2785 aaKnown RBP2.78□□□□□ -1.97
EFCAB13-213ENST00000523978 FLNCQ14315 2725 aa2.77□□□□□ -1.97
EFCAB13-213ENST00000523978 ITPR2Q14571 2701 aa2.77□□□□□ -1.97
EFCAB13-213ENST00000523978 JMJD1CQ15652 2540 aa2.77□□□□□ -1.97
EFCAB13-213ENST00000523978 RP1L1Q8IWN7 2480 aaPredicted RBP2.77□□□□□ -1.97
EFCAB13-213ENST00000523978 USP9YO00507 2555 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms