RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 CDKN2A-AS1Q9UH64 79 aa0.65□□□□□ -2.31
CPNE3-207ENST00000523588 SSPOA2VEC9 5147 aa0.64□□□□□ -2.31
CPNE3-207ENST00000523588 CACNA1EQ15878 2313 aa0.64□□□□□ -2.31
CPNE3-207ENST00000523588 KNL1Q8NG31 2342 aa0.64□□□□□ -2.31
CPNE3-207ENST00000523588 A0A096LNT2 108 aa0.64□□□□□ -2.31
CPNE3-207ENST00000523588 MRPL33O75394 65 aaKnown RBP0.64□□□□□ -2.31
CPNE3-207ENST00000523588 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.64□□□□□ -2.31
CPNE3-207ENST00000523588 Q8IZM0 81 aa0.64□□□□□ -2.31
CPNE3-207ENST00000523588 CRIPTQ9P021 101 aa0.64□□□□□ -2.31
CPNE3-207ENST00000523588 PLCE1Q9P212 2302 aa0.64□□□□□ -2.31
CPNE3-207ENST00000523588 RNF213Q63HN8 5207 aa0.63□□□□□ -2.31
CPNE3-207ENST00000523588 SPTY2D1-AS1A0A0U1RR47 76 aa0.63□□□□□ -2.31
CPNE3-207ENST00000523588 I3L2K1 104 aa0.63□□□□□ -2.31
CPNE3-207ENST00000523588 POLR2KP53803 58 aaKnown RBP0.63□□□□□ -2.31
CPNE3-207ENST00000523588 RPL39P62891 51 aaKnown RBP0.63□□□□□ -2.31
CPNE3-207ENST00000523588 NCOR2Q9Y618 2525 aa0.63□□□□□ -2.31
CPNE3-207ENST00000523588 TEP1Q99973 2627 aaKnown RBP0.62□□□□□ -2.31
CPNE3-207ENST00000523588 RPS27P42677 84 aaKnown RBP0.62□□□□□ -2.31
CPNE3-207ENST00000523588 RPL39LQ96EH5 51 aaKnown RBP0.62□□□□□ -2.31
CPNE3-207ENST00000523588 USF3Q68DE3 2245 aa0.62□□□□□ -2.31
CPNE3-207ENST00000523588 LYNX1G3V0Z9 82 aa0.61□□□□□ -2.31
CPNE3-207ENST00000523588 H0YAA0 97 aa0.61□□□□□ -2.31
CPNE3-207ENST00000523588 K7EQZ3 153 aa0.61□□□□□ -2.31
CPNE3-207ENST00000523588 CCL22O00626 93 aa0.61□□□□□ -2.31
CPNE3-207ENST00000523588 PIGYQ3MUY2 71 aa0.61□□□□□ -2.31
CPNE3-207ENST00000523588 LEAP2Q969E1 77 aa0.61□□□□□ -2.31
CPNE3-207ENST00000523588 FAT4Q6V0I7 4981 aa0.6□□□□□ -2.31
CPNE3-207ENST00000523588 ABCA13Q86UQ4 5058 aa0.6□□□□□ -2.31
CPNE3-207ENST00000523588 KRTAP2-3P0C7H8 128 aa0.6□□□□□ -2.31
CPNE3-207ENST00000523588 PRCDQ00LT1 54 aa0.6□□□□□ -2.31
CPNE3-207ENST00000523588 LELP1Q5T871 98 aa0.6□□□□□ -2.31
CPNE3-207ENST00000523588 MINOS1Q5TGZ0 78 aa0.6□□□□□ -2.31
CPNE3-207ENST00000523588 WFDC13Q8IUB5 93 aa0.6□□□□□ -2.31
CPNE3-207ENST00000523588 MRPL34Q9BQ48 92 aaKnown RBP0.6□□□□□ -2.31
CPNE3-207ENST00000523588 KRTAP2-4Q9BYR9 128 aa0.6□□□□□ -2.31
CPNE3-207ENST00000523588 KRTAP2-1Q9BYU5 128 aa0.6□□□□□ -2.31
CPNE3-207ENST00000523588 C6orf48Q9UBA6 75 aa0.6□□□□□ -2.31
CPNE3-207ENST00000523588 PKDREJQ9NTG1 2253 aa0.59□□□□□ -2.31
CPNE3-207ENST00000523588 PTPRZ1P23471 2315 aaPredicted RBP0.59□□□□□ -2.31
CPNE3-207ENST00000523588 IGLV5-48A0A075B6I7 105 aa0.59□□□□□ -2.31
CPNE3-207ENST00000523588 COX6A2Q02221 97 aa0.59□□□□□ -2.31
CPNE3-207ENST00000523588 WFDC10BQ8IUB3 73 aa0.59□□□□□ -2.31
CPNE3-207ENST00000523588 UBE2DNLQ8IWF7 75 aa0.59□□□□□ -2.31
CPNE3-207ENST00000523588 TP53AIP1Q9HCN2 124 aa0.59□□□□□ -2.31
CPNE3-207ENST00000523588 WNK2Q9Y3S1 2297 aa0.59□□□□□ -2.32
CPNE3-207ENST00000523588 ANKHD1Q8IWZ3 2542 aaKnown RBP0.59□□□□□ -2.32
CPNE3-207ENST00000523588 APCP25054 2843 aa0.58□□□□□ -2.32
CPNE3-207ENST00000523588 PCNX1Q96RV3 2341 aa0.58□□□□□ -2.32
CPNE3-207ENST00000523588 M0QY20 66 aa0.58□□□□□ -2.32
CPNE3-207ENST00000523588 COX6B2Q6YFQ2 88 aa0.58□□□□□ -2.32
CPNE3-207ENST00000523588 DEFB123Q8N688 67 aa0.58□□□□□ -2.32
CPNE3-207ENST00000523588 NCOR1O75376 2440 aa0.58□□□□□ -2.32
CPNE3-207ENST00000523588 FAM208BQ5VWN6 2430 aa0.58□□□□□ -2.32
CPNE3-207ENST00000523588 TRANK1O15050 2925 aa0.57□□□□□ -2.32
CPNE3-207ENST00000523588 MMP24-AS1A0A0U1RRL7 71 aa0.57□□□□□ -2.32
CPNE3-207ENST00000523588 DEFB130BP0DP73 79 aa0.57□□□□□ -2.32
CPNE3-207ENST00000523588 DEFB130AP0DP74 79 aa0.57□□□□□ -2.32
CPNE3-207ENST00000523588 H1FX-AS1Q4G0G2 97 aa0.57□□□□□ -2.32
CPNE3-207ENST00000523588 DEFB106AQ8N104 65 aa0.57□□□□□ -2.32
CPNE3-207ENST00000523588 DEFB104AQ8WTQ1 72 aa0.57□□□□□ -2.32
CPNE3-207ENST00000523588 USMG5Q96IX5 58 aa0.57□□□□□ -2.32
CPNE3-207ENST00000523588 KAAG1Q9UBP8 84 aa0.57□□□□□ -2.32
CPNE3-207ENST00000523588 HERC1Q15751 4861 aa0.57□□□□□ -2.32
CPNE3-207ENST00000523588 IGF2RP11717 2491 aa0.57□□□□□ -2.32
CPNE3-207ENST00000523588 SPTBN4Q9H254 2564 aa0.56□□□□□ -2.32
CPNE3-207ENST00000523588 TPRP12270 2363 aaKnown RBP0.56□□□□□ -2.32
CPNE3-207ENST00000523588 A8MTW9 85 aa0.56□□□□□ -2.32
CPNE3-207ENST00000523588 COL6A5A8TX70 2615 aa0.56□□□□□ -2.32
CPNE3-207ENST00000523588 EPPK1P58107 5090 aaKnown RBP0.56□□□□□ -2.32
CPNE3-207ENST00000523588 CSPG4Q6UVK1 2322 aa0.55□□□□□ -2.32
CPNE3-207ENST00000523588 C2CD3Q4AC94 2353 aa0.55□□□□□ -2.32
CPNE3-207ENST00000523588 DEFB131AP59861 70 aa0.55□□□□□ -2.32
CPNE3-207ENST00000523588 WT1-ASQ06250 92 aa0.55□□□□□ -2.32
CPNE3-207ENST00000523588 RPL39P5Q59GN2 51 aa0.55□□□□□ -2.32
CPNE3-207ENST00000523588 CLPSL2Q6UWE3 100 aa0.55□□□□□ -2.32
CPNE3-207ENST00000523588 TMEM167AQ8TBQ9 72 aa0.55□□□□□ -2.32
CPNE3-207ENST00000523588 TOMM7Q9P0U1 55 aa0.55□□□□□ -2.32
CPNE3-207ENST00000523588 PTPN13Q12923 2485 aa0.54□□□□□ -2.32
CPNE3-207ENST00000523588 JMJD1CQ15652 2540 aa0.54□□□□□ -2.32
CPNE3-207ENST00000523588 DEFB108AA8MXU0 73 aa0.54□□□□□ -2.32
CPNE3-207ENST00000523588 PHGR1C9JFL3 82 aa0.54□□□□□ -2.32
CPNE3-207ENST00000523588 K7EIM0 57 aa0.54□□□□□ -2.32
CPNE3-207ENST00000523588 SPRR1AP35321 89 aa0.54□□□□□ -2.32
CPNE3-207ENST00000523588 DEFB105AQ8NG35 78 aa0.54□□□□□ -2.32
CPNE3-207ENST00000523588 APLNQ9ULZ1 77 aa0.54□□□□□ -2.32
CPNE3-207ENST00000523588 ACACAQ13085 2346 aa0.53□□□□□ -2.32
CPNE3-207ENST00000523588 PRLHP81277 87 aa0.53□□□□□ -2.32
CPNE3-207ENST00000523588 PRO0255Q9UI72 69 aa0.53□□□□□ -2.32
CPNE3-207ENST00000523588 HYDINQ4G0P3 5121 aa0.53□□□□□ -2.33
CPNE3-207ENST00000523588 SPTBN1Q01082 2364 aaKnown RBP0.53□□□□□ -2.33
CPNE3-207ENST00000523588 RYR3Q15413 4870 aa0.52□□□□□ -2.33
CPNE3-207ENST00000523588 SPTBN2O15020 2390 aa0.52□□□□□ -2.33
CPNE3-207ENST00000523588 SPRR1BP22528 89 aa0.52□□□□□ -2.33
CPNE3-207ENST00000523588 KLK9Q2XQG4 91 aa0.52□□□□□ -2.33
CPNE3-207ENST00000523588 S4R3F8 94 aa0.52□□□□□ -2.33
CPNE3-207ENST00000523588 AKAP6Q13023 2319 aa0.52□□□□□ -2.33
CPNE3-207ENST00000523588 MEGF8Q7Z7M0 2845 aa0.51□□□□□ -2.33
CPNE3-207ENST00000523588 H3BUA1 57 aa0.51□□□□□ -2.33
CPNE3-207ENST00000523588 STATHP02808 62 aa0.51□□□□□ -2.33
CPNE3-207ENST00000523588 DEFB109BQ30KR1 87 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms