RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 CFAP46Q8IYW2 2715 aa7.72□□□□□ -1.17
EXTL3-214ENST00000523271 FP248Q71RG6 208 aaPredicted RBP7.72□□□□□ -1.17
EXTL3-214ENST00000523271 HELZ2Q9BYK8 2649 aaKnown RBP7.71□□□□□ -1.17
EXTL3-214ENST00000523271 NBEAL1Q6ZS30 2694 aa7.71□□□□□ -1.17
EXTL3-214ENST00000523271 MMP24-AS1A0A0U1RRL7 71 aa7.71□□□□□ -1.18
EXTL3-214ENST00000523271 FLNBO75369 2602 aaKnown RBP7.69□□□□□ -1.18
EXTL3-214ENST00000523271 STAB1Q9NY15 2570 aa7.66□□□□□ -1.18
EXTL3-214ENST00000523271 CASC10Q5T4H9 136 aa7.65□□□□□ -1.18
EXTL3-214ENST00000523271 C20orf166-AS1Q96NR2 134 aa7.64□□□□□ -1.19
EXTL3-214ENST00000523271 ADM2Q7Z4H4 148 aa7.59□□□□□ -1.19
EXTL3-214ENST00000523271 CHD6Q8TD26 2715 aa7.57□□□□□ -1.2
EXTL3-214ENST00000523271 LINC00472Q9H8W2 130 aa7.56□□□□□ -1.2
EXTL3-214ENST00000523271 PLAC8Q9NZF1 115 aa7.56□□□□□ -1.2
EXTL3-214ENST00000523271 Q8NDZ9 215 aa7.54□□□□□ -1.2
EXTL3-214ENST00000523271 UNC79Q9P2D8 2635 aa7.53□□□□□ -1.2
EXTL3-214ENST00000523271 STAB2Q8WWQ8 2551 aa7.52□□□□□ -1.21
EXTL3-214ENST00000523271 NOTCH1P46531 2555 aa7.52□□□□□ -1.21
EXTL3-214ENST00000523271 KRTAP25-1Q3LHN0 102 aa7.51□□□□□ -1.21
EXTL3-214ENST00000523271 GCN1Q92616 2671 aaKnown RBP7.5□□□□□ -1.21
EXTL3-214ENST00000523271 SPATA8Q6RVD6 105 aa7.5□□□□□ -1.21
EXTL3-214ENST00000523271 A0A096LNT2 108 aa7.5□□□□□ -1.21
EXTL3-214ENST00000523271 PANO1I0J062 215 aa7.49□□□□□ -1.21
EXTL3-214ENST00000523271 CYSTM1Q9H1C7 97 aa7.48□□□□□ -1.21
EXTL3-214ENST00000523271 SPRR1AP35321 89 aa7.48□□□□□ -1.21
EXTL3-214ENST00000523271 KRTAP10-3P60369 221 aa7.47□□□□□ -1.21
EXTL3-214ENST00000523271 Q6ZR54 194 aa7.47□□□□□ -1.21
EXTL3-214ENST00000523271 SPRR1BP22528 89 aa7.46□□□□□ -1.22
EXTL3-214ENST00000523271 TEX15Q9BXT5 2789 aa7.46□□□□□ -1.22
EXTL3-214ENST00000523271 NDUFAF8A1L188 74 aa7.46□□□□□ -1.22
EXTL3-214ENST00000523271 ZNF292O60281 2723 aa7.44□□□□□ -1.22
EXTL3-214ENST00000523271 SRCAPQ6ZRS2 3230 aa7.43□□□□□ -1.22
EXTL3-214ENST00000523271 KRTAP26-1Q6PEX3 210 aa7.41□□□□□ -1.22
EXTL3-214ENST00000523271 OXTP01178 125 aa7.4□□□□□ -1.23
EXTL3-214ENST00000523271 TEP1Q99973 2627 aaKnown RBP7.39□□□□□ -1.23
EXTL3-214ENST00000523271 TRANK1O15050 2925 aa7.39□□□□□ -1.23
EXTL3-214ENST00000523271 ITPR2Q14571 2701 aa7.38□□□□□ -1.23
EXTL3-214ENST00000523271 COL6A5A8TX70 2615 aa7.38□□□□□ -1.23
EXTL3-214ENST00000523271 Q5VSD8 79 aa7.38□□□□□ -1.23
EXTL3-214ENST00000523271 DNAH12Q6ZR08 3092 aa7.38□□□□□ -1.23
EXTL3-214ENST00000523271 NSD1Q96L73 2696 aaPredicted RBP7.34□□□□□ -1.24
EXTL3-214ENST00000523271 A8MUU9 505 aa7.33□□□□□ -1.24
EXTL3-214ENST00000523271 C10orf95Q9H7T3 257 aa7.32□□□□□ -1.24
EXTL3-214ENST00000523271 TNP1P09430 55 aa7.32□□□□□ -1.24
EXTL3-214ENST00000523271 A6NN06 94 aa7.31□□□□□ -1.24
EXTL3-214ENST00000523271 SETXQ7Z333 2677 aaKnown RBP7.26□□□□□ -1.25
EXTL3-214ENST00000523271 A0A087X002 238 aa7.23□□□□□ -1.25
EXTL3-214ENST00000523271 BAHCC1Q9P281 2608 aa7.21□□□□□ -1.25
EXTL3-214ENST00000523271 MAP1AP78559 2803 aaPredicted RBP7.21□□□□□ -1.26
EXTL3-214ENST00000523271 PP632Q6XCG6 107 aa7.21□□□□□ -1.26
EXTL3-214ENST00000523271 A8MU10 97 aa7.19□□□□□ -1.26
EXTL3-214ENST00000523271 KRTAP29-1A8MX34 341 aaPredicted RBP7.18□□□□□ -1.26
EXTL3-214ENST00000523271 APCP25054 2843 aa7.18□□□□□ -1.26
EXTL3-214ENST00000523271 RPS29P62273 56 aaKnown RBP7.17□□□□□ -1.26
EXTL3-214ENST00000523271 CEP350Q5VT06 3117 aa7.17□□□□□ -1.26
EXTL3-214ENST00000523271 KRTAP1-3Q8IUG1 177 aa7.11□□□□□ -1.27
EXTL3-214ENST00000523271 KRTAP10-1P60331 282 aa7.11□□□□□ -1.27
EXTL3-214ENST00000523271 ITPR1Q14643 2758 aa7.09□□□□□ -1.27
EXTL3-214ENST00000523271 KRTAP1-1Q07627 177 aa7.08□□□□□ -1.28
EXTL3-214ENST00000523271 KRTAP11-1Q8IUC1 163 aa7.07□□□□□ -1.28
EXTL3-214ENST00000523271 LCE6AA0A183 80 aa7.06□□□□□ -1.28
EXTL3-214ENST00000523271 IGSF10Q6WRI0 2623 aa7.06□□□□□ -1.28
EXTL3-214ENST00000523271 KRTAP4-16G5E9R7 235 aaPredicted RBP7.05□□□□□ -1.28
EXTL3-214ENST00000523271 P0C880 135 aa7.05□□□□□ -1.28
EXTL3-214ENST00000523271 CHD7Q9P2D1 2997 aa7.05□□□□□ -1.28
EXTL3-214ENST00000523271 NOTCH2NLQ7Z3S9 236 aa7.04□□□□□ -1.28
EXTL3-214ENST00000523271 KRTAP10-2P60368 255 aa7.03□□□□□ -1.28
EXTL3-214ENST00000523271 KRTAP1-5Q9BYS1 174 aa7.03□□□□□ -1.28
EXTL3-214ENST00000523271 CFAP54Q96N23 3096 aa7.02□□□□□ -1.29
EXTL3-214ENST00000523271 A0A0C4DFX4 3053 aa7.02□□□□□ -1.29
EXTL3-214ENST00000523271 GOLGB1Q14789 3259 aaKnown RBP7.01□□□□□ -1.29
EXTL3-214ENST00000523271 NBEAL2Q6ZNJ1 2754 aa7□□□□□ -1.29
EXTL3-214ENST00000523271 UBR5O95071 2799 aaPredicted RBP6.99□□□□□ -1.29
EXTL3-214ENST00000523271 MGAQ8IWI9 3026 aa6.98□□□□□ -1.29
EXTL3-214ENST00000523271 C5orf42Q9H799 3197 aa6.96□□□□□ -1.3
EXTL3-214ENST00000523271 NIPBLQ6KC79 2804 aaeCLIP6.95□□□□□ -1.3
EXTL3-214ENST00000523271 UTP20O75691 2785 aaKnown RBP6.95□□□□□ -1.3
EXTL3-214ENST00000523271 CHD9Q3L8U1 2897 aa6.93□□□□□ -1.3
EXTL3-214ENST00000523271 KRTAP10-8P60410 259 aa6.92□□□□□ -1.3
EXTL3-214ENST00000523271 DSPP15924 2871 aaKnown RBP6.92□□□□□ -1.3
EXTL3-214ENST00000523271 FLNCQ14315 2725 aa6.91□□□□□ -1.3
EXTL3-214ENST00000523271 LAMA2P24043 3122 aaKnown RBP6.91□□□□□ -1.3
EXTL3-214ENST00000523271 PCNTO95613 3336 aa6.91□□□□□ -1.3
EXTL3-214ENST00000523271 PRO2289Q9P1D8 64 aa6.87□□□□□ -1.31
EXTL3-214ENST00000523271 Q6ZRN7 208 aaPredicted RBP6.86□□□□□ -1.31
EXTL3-214ENST00000523271 FRYLO94915 3013 aa6.86□□□□□ -1.31
EXTL3-214ENST00000523271 FRYQ5TBA9 3013 aa6.86□□□□□ -1.31
EXTL3-214ENST00000523271 VPS13AQ96RL7 3174 aa6.83□□□□□ -1.32
EXTL3-214ENST00000523271 KRTAP13-2Q52LG2 175 aa6.7□□□□□ -1.34
EXTL3-214ENST00000523271 HIVEP1P15822 2718 aa6.69□□□□□ -1.34
EXTL3-214ENST00000523271 KALRNO60229 2985 aa6.69□□□□□ -1.34
EXTL3-214ENST00000523271 H0YAA0 97 aa6.67□□□□□ -1.34
EXTL3-214ENST00000523271 LRBAP50851 2863 aa6.64□□□□□ -1.35
EXTL3-214ENST00000523271 KRTAP13-1Q8IUC0 172 aa6.64□□□□□ -1.35
EXTL3-214ENST00000523271 UTRNP46939 3433 aa6.64□□□□□ -1.35
EXTL3-214ENST00000523271 TRIOO75962 3097 aa6.61□□□□□ -1.35
EXTL3-214ENST00000523271 TACC2O95359 2948 aa6.59□□□□□ -1.35
EXTL3-214ENST00000523271 ZZEF1O43149 2961 aa6.58□□□□□ -1.36
EXTL3-214ENST00000523271 WDFY4Q6ZS81 3184 aa6.57□□□□□ -1.36
EXTL3-214ENST00000523271 CELSR2Q9HCU4 2923 aa6.57□□□□□ -1.36
EXTL3-214ENST00000523271 HTTP42858 3142 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms