RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 SPRR1BP22528 89 aa9.38□□□□□ -0.91
PABPC1-221ENST00000522720 SLC25A20O43772 301 aa9.36□□□□□ -0.91
PABPC1-221ENST00000522720 H3BUT2 72 aa9.35□□□□□ -0.91
PABPC1-221ENST00000522720 TRIAP1O43715 76 aa9.34□□□□□ -0.91
PABPC1-221ENST00000522720 C9orf153Q5TBE3 101 aa9.34□□□□□ -0.91
PABPC1-221ENST00000522720 IGLV7-46A0A075B6I9 117 aa9.33□□□□□ -0.92
PABPC1-221ENST00000522720 FABP2P12104 132 aa9.33□□□□□ -0.92
PABPC1-221ENST00000522720 TRBV20-1A0A075B6N2 111 aa9.32□□□□□ -0.92
PABPC1-221ENST00000522720 A0A1B0GX51 115 aa9.32□□□□□ -0.92
PABPC1-221ENST00000522720 RPS29P62273 56 aaKnown RBP9.32□□□□□ -0.92
PABPC1-221ENST00000522720 A0A1W2PPM0 123 aa9.31□□□□□ -0.92
PABPC1-221ENST00000522720 LAMTOR3Q9UHA4 124 aa9.31□□□□□ -0.92
PABPC1-221ENST00000522720 TEX49A0A1B0GTD5 131 aa9.3□□□□□ -0.92
PABPC1-221ENST00000522720 GHRHP01286 108 aa9.3□□□□□ -0.92
PABPC1-221ENST00000522720 TPRXLQ17RH7 258 aa9.3□□□□□ -0.92
PABPC1-221ENST00000522720 LINC00575Q6W349 94 aa9.3□□□□□ -0.92
PABPC1-221ENST00000522720 FP248Q71RG6 208 aaPredicted RBP9.3□□□□□ -0.92
PABPC1-221ENST00000522720 DEFB105AQ8NG35 78 aa9.3□□□□□ -0.92
PABPC1-221ENST00000522720 hADV29S1A0JD25 119 aa9.28□□□□□ -0.92
PABPC1-221ENST00000522720 NAA38Q9BRA0 125 aaKnown RBP9.28□□□□□ -0.92
PABPC1-221ENST00000522720 IGLV5-48A0A075B6I7 105 aa9.27□□□□□ -0.93
PABPC1-221ENST00000522720 LINC01547P58512 204 aaPredicted RBP9.27□□□□□ -0.93
PABPC1-221ENST00000522720 ATXN8Q156A1 80 aa9.27□□□□□ -0.93
PABPC1-221ENST00000522720 Q8N377 158 aa9.27□□□□□ -0.93
PABPC1-221ENST00000522720 H3BQ85 93 aa9.26□□□□□ -0.93
PABPC1-221ENST00000522720 SMIM29Q86T20 159 aa9.26□□□□□ -0.93
PABPC1-221ENST00000522720 DNAL4O96015 105 aa9.25□□□□□ -0.93
PABPC1-221ENST00000522720 TRACP01848 142 aa9.25□□□□□ -0.93
PABPC1-221ENST00000522720 OCIAD2Q56VL3 154 aa9.25□□□□□ -0.93
PABPC1-221ENST00000522720 GTF2H5Q6ZYL4 71 aa9.25□□□□□ -0.93
PABPC1-221ENST00000522720 CDIP1Q9H305 208 aa9.25□□□□□ -0.93
PABPC1-221ENST00000522720 LST1O00453 97 aa9.23□□□□□ -0.93
PABPC1-221ENST00000522720 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.23□□□□□ -0.93
PABPC1-221ENST00000522720 CLEC2BQ92478 149 aa9.23□□□□□ -0.93
PABPC1-221ENST00000522720 SPCS1Q9Y6A9 102 aa9.23□□□□□ -0.93
PABPC1-221ENST00000522720 TCL1BO95988 128 aa9.22□□□□□ -0.93
PABPC1-221ENST00000522720 KRTAP13-3Q3SY46 172 aa9.2□□□□□ -0.94
PABPC1-221ENST00000522720 FAM218AQ96MZ4 157 aa9.2□□□□□ -0.94
PABPC1-221ENST00000522720 HRCT1Q6UXD1 115 aa9.19□□□□□ -0.94
PABPC1-221ENST00000522720 MUC2Q02817 5179 aa9.19□□□□□ -0.94
PABPC1-221ENST00000522720 CD164Q04900 197 aa9.18□□□□□ -0.94
PABPC1-221ENST00000522720 Q6ZQY7 126 aa9.18□□□□□ -0.94
PABPC1-221ENST00000522720 PPDPFLQ8WWR9 84 aa9.18□□□□□ -0.94
PABPC1-221ENST00000522720 ORMDL1Q9P0S3 153 aa9.18□□□□□ -0.94
PABPC1-221ENST00000522720 K7EP34 96 aa9.17□□□□□ -0.94
PABPC1-221ENST00000522720 LIMD2Q9BT23 127 aa9.17□□□□□ -0.94
PABPC1-221ENST00000522720 TMEM256-PLSCR3K7ERE1 68 aa9.16□□□□□ -0.94
PABPC1-221ENST00000522720 H3BMG7 143 aa9.15□□□□□ -0.94
PABPC1-221ENST00000522720 BAALC-AS2P0C853 105 aa9.14□□□□□ -0.95
PABPC1-221ENST00000522720 MUC17Q685J3 4493 aa9.12□□□□□ -0.95
PABPC1-221ENST00000522720 A0A0G2JQZ4 141 aa9.12□□□□□ -0.95
PABPC1-221ENST00000522720 A0A1B0GV90 55 aa9.12□□□□□ -0.95
PABPC1-221ENST00000522720 C9JAW5 83 aa9.12□□□□□ -0.95
PABPC1-221ENST00000522720 F8W1H4 67 aa9.11□□□□□ -0.95
PABPC1-221ENST00000522720 F8WEM9 126 aa9.11□□□□□ -0.95
PABPC1-221ENST00000522720 UBE2V1Q13404 147 aa9.11□□□□□ -0.95
PABPC1-221ENST00000522720 Q5XG85 94 aa9.11□□□□□ -0.95
PABPC1-221ENST00000522720 H3BT86 120 aa9.1□□□□□ -0.95
PABPC1-221ENST00000522720 IGLV8-61A0A075B6I0 122 aa9.08□□□□□ -0.96
PABPC1-221ENST00000522720 ANKRD29Q8N6D5 301 aa9.07□□□□□ -0.96
PABPC1-221ENST00000522720 Q6JHZ5 121 aa9.06□□□□□ -0.96
PABPC1-221ENST00000522720 NDUFV3P56181 108 aaKnown RBP9.05□□□□□ -0.96
PABPC1-221ENST00000522720 JMJD7-PLA2G4BH0Y9G9 81 aa9.04□□□□□ -0.96
PABPC1-221ENST00000522720 ASB16-AS1Q495Z4 193 aa9.04□□□□□ -0.96
PABPC1-221ENST00000522720 C1orf195Q5TG92 126 aa9.04□□□□□ -0.96
PABPC1-221ENST00000522720 IGFL1Q6UW32 110 aa9.03□□□□□ -0.96
PABPC1-221ENST00000522720 A0A0U1RQV1 116 aa9.02□□□□□ -0.97
PABPC1-221ENST00000522720 XP32Q5T750 250 aa9.02□□□□□ -0.97
PABPC1-221ENST00000522720 PRO0461Q9UI25 63 aa9.01□□□□□ -0.97
PABPC1-221ENST00000522720 SEC61BP60468 96 aaKnown RBP9□□□□□ -0.97
PABPC1-221ENST00000522720 RBM3P98179 157 aaKnown RBP9□□□□□ -0.97
PABPC1-221ENST00000522720 C21orf62-AS1Q17RA5 79 aa8.99□□□□□ -0.97
PABPC1-221ENST00000522720 TRBV7-7A0A0K0K1E9 115 aa8.98□□□□□ -0.97
PABPC1-221ENST00000522720 MTURNQ8N3F0 131 aa8.98□□□□□ -0.97
PABPC1-221ENST00000522720 PDE6GP18545 87 aa8.97□□□□□ -0.97
PABPC1-221ENST00000522720 SMCPP49901 116 aaPredicted RBP8.97□□□□□ -0.97
PABPC1-221ENST00000522720 DSCR8Q96T75 97 aa8.97□□□□□ -0.97
PABPC1-221ENST00000522720 C9orf92A6NGG3 77 aa8.96□□□□□ -0.98
PABPC1-221ENST00000522720 TEN1Q86WV5 123 aa8.94□□□□□ -0.98
PABPC1-221ENST00000522720 OBSCN-AS1Q96MR7 158 aa8.94□□□□□ -0.98
PABPC1-221ENST00000522720 FAT4Q6V0I7 4981 aa8.91□□□□□ -0.98
PABPC1-221ENST00000522720 ETDBQ3ZM63 59 aa8.91□□□□□ -0.98
PABPC1-221ENST00000522720 KRTAP4-1Q9BYQ7 146 aa8.91□□□□□ -0.98
PABPC1-221ENST00000522720 Q6Q795 121 aa8.9□□□□□ -0.98
PABPC1-221ENST00000522720 LOC110117498A0A087WWA1 95 aa8.88□□□□□ -0.99
PABPC1-221ENST00000522720 TRBV7-4A0A0J9YYF1 115 aa8.88□□□□□ -0.99
PABPC1-221ENST00000522720 A0A1B0GW54 56 aa8.87□□□□□ -0.99
PABPC1-221ENST00000522720 A0A1B0GV72 72 aa8.86□□□□□ -0.99
PABPC1-221ENST00000522720 C14orf132Q9NPU4 83 aa8.86□□□□□ -0.99
PABPC1-221ENST00000522720 SS18L2Q9UHA2 77 aa8.85□□□□□ -0.99
PABPC1-221ENST00000522720 CCKP06307 115 aa8.84□□□□□ -0.99
PABPC1-221ENST00000522720 PCOTHQ58A44 107 aa8.84□□□□□ -0.99
PABPC1-221ENST00000522720 LCE2AQ5TA79 106 aaPredicted RBP8.84□□□□□ -0.99
PABPC1-221ENST00000522720 Q6ZQT0 140 aa8.83□□□□□ -1
PABPC1-221ENST00000522720 J3QR89 54 aa8.82□□□□□ -1
PABPC1-221ENST00000522720 A0A087WSZ3 146 aa8.81□□□□□ -1
PABPC1-221ENST00000522720 A0A1W2PNM2 257 aa8.81□□□□□ -1
PABPC1-221ENST00000522720 VPS25Q9BRG1 176 aa8.81□□□□□ -1
PABPC1-221ENST00000522720 RPL37P61927 97 aaKnown RBP8.8□□□□□ -1
PABPC1-221ENST00000522720 ACYP1P07311 99 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms