RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 LEPROTO15243 131 aa2.18□□□□□ -2.06
VPS13B-208ENST00000521037 SNCGO76070 127 aa2.18□□□□□ -2.06
VPS13B-208ENST00000521037 COX6CP09669 75 aa2.18□□□□□ -2.06
VPS13B-208ENST00000521037 LGALS3P17931 250 aaKnown RBP2.18□□□□□ -2.06
VPS13B-208ENST00000521037 TPRXLQ17RH7 258 aa2.18□□□□□ -2.06
VPS13B-208ENST00000521037 ASB16-AS1Q495Z4 193 aa2.18□□□□□ -2.06
VPS13B-208ENST00000521037 PRR9Q5T870 116 aa2.18□□□□□ -2.06
VPS13B-208ENST00000521037 ENHOQ6UWT2 76 aa2.18□□□□□ -2.06
VPS13B-208ENST00000521037 NTM-AS1Q6ZSK4 140 aa2.18□□□□□ -2.06
VPS13B-208ENST00000521037 ARL17AQ8IVW1 177 aa2.18□□□□□ -2.06
VPS13B-208ENST00000521037 ZFAND2AQ8N6M9 145 aa2.18□□□□□ -2.06
VPS13B-208ENST00000521037 IGLV4-69A0A075B6H9 119 aa2.17□□□□□ -2.06
VPS13B-208ENST00000521037 TRAV26-2A0A0B4J265 109 aa2.17□□□□□ -2.06
VPS13B-208ENST00000521037 TRAV12-3A0A0B4J271 114 aa2.17□□□□□ -2.06
VPS13B-208ENST00000521037 TRBV10-2A0A0K0K1G8 114 aa2.17□□□□□ -2.06
VPS13B-208ENST00000521037 SLC25A20O43772 301 aa2.17□□□□□ -2.06
VPS13B-208ENST00000521037 ZNF861PO60384 105 aa2.17□□□□□ -2.06
VPS13B-208ENST00000521037 TIMM17BO60830 172 aa2.17□□□□□ -2.06
VPS13B-208ENST00000521037 TCL1BO95988 128 aa2.17□□□□□ -2.06
VPS13B-208ENST00000521037 ACYP1P07311 99 aa2.17□□□□□ -2.06
VPS13B-208ENST00000521037 IFITM1P13164 125 aa2.17□□□□□ -2.06
VPS13B-208ENST00000521037 RNASE4P34096 147 aaKnown RBP2.17□□□□□ -2.06
VPS13B-208ENST00000521037 SYCNQ0VAF6 134 aa2.17□□□□□ -2.06
VPS13B-208ENST00000521037 ZFP2Q6ZN57 461 aa2.17□□□□□ -2.06
VPS13B-208ENST00000521037 ANKRD29Q8N6D5 301 aa2.17□□□□□ -2.06
VPS13B-208ENST00000521037 ANAPC13Q9BS18 74 aa2.17□□□□□ -2.06
VPS13B-208ENST00000521037 TTTY13Q9BZ97 58 aa2.17□□□□□ -2.06
VPS13B-208ENST00000521037 IMUPQ9GZP8 106 aa2.17□□□□□ -2.06
VPS13B-208ENST00000521037 I3L3M4 83 aa2.16□□□□□ -2.06
VPS13B-208ENST00000521037 MT-ATP8P03928 68 aa2.16□□□□□ -2.06
VPS13B-208ENST00000521037 MGPP08493 103 aa2.16□□□□□ -2.06
VPS13B-208ENST00000521037 RNASE3P12724 160 aaKnown RBP2.16□□□□□ -2.06
VPS13B-208ENST00000521037 TMEM170BQ5T4T1 132 aa2.16□□□□□ -2.06
VPS13B-208ENST00000521037 KRTAP11-1Q8IUC1 163 aa2.16□□□□□ -2.06
VPS13B-208ENST00000521037 RPL39LQ96EH5 51 aaKnown RBP2.16□□□□□ -2.06
VPS13B-208ENST00000521037 CARD19Q96LW7 228 aa2.16□□□□□ -2.06
VPS13B-208ENST00000521037 AMELXQ99217 191 aa2.16□□□□□ -2.06
VPS13B-208ENST00000521037 TMEM126AQ9H061 195 aa2.16□□□□□ -2.06
VPS13B-208ENST00000521037 SND1-IT1Q9HBX3 110 aa2.16□□□□□ -2.06
VPS13B-208ENST00000521037 IGHV1-58A0A0C4DH39 117 aa2.15□□□□□ -2.07
VPS13B-208ENST00000521037 TRBV7-7A0A0K0K1E9 115 aa2.15□□□□□ -2.07
VPS13B-208ENST00000521037 C9JAW5 83 aa2.15□□□□□ -2.07
VPS13B-208ENST00000521037 M0QY20 66 aa2.15□□□□□ -2.07
VPS13B-208ENST00000521037 ZNF22P17026 224 aaPredicted RBP2.15□□□□□ -2.07
VPS13B-208ENST00000521037 MRPS36P82909 103 aaKnown RBP2.15□□□□□ -2.07
VPS13B-208ENST00000521037 KRTAP19-6Q3LI70 58 aa2.15□□□□□ -2.07
VPS13B-208ENST00000521037 UBE2WQ96B02 151 aa2.15□□□□□ -2.07
VPS13B-208ENST00000521037 TIMM21Q9BVV7 248 aa2.15□□□□□ -2.07
VPS13B-208ENST00000521037 IGKV2D-24A0A075B6R9 120 aa2.14□□□□□ -2.07
VPS13B-208ENST00000521037 LST1O00453 97 aa2.14□□□□□ -2.07
VPS13B-208ENST00000521037 MP68P56378 58 aa2.14□□□□□ -2.07
VPS13B-208ENST00000521037 MIAQ16674 131 aa2.14□□□□□ -2.07
VPS13B-208ENST00000521037 C2orf82Q6UX34 121 aa2.14□□□□□ -2.07
VPS13B-208ENST00000521037 RETNLBQ9BQ08 111 aa2.14□□□□□ -2.07
VPS13B-208ENST00000521037 TRGV4A0A0C4DH28 118 aa2.13□□□□□ -2.07
VPS13B-208ENST00000521037 NDUFA1O15239 70 aa2.13□□□□□ -2.07
VPS13B-208ENST00000521037 GNRH2O43555 120 aa2.13□□□□□ -2.07
VPS13B-208ENST00000521037 TRACP01848 142 aa2.13□□□□□ -2.07
VPS13B-208ENST00000521037 CRYGAP11844 174 aa2.13□□□□□ -2.07
VPS13B-208ENST00000521037 TSPEAR-AS2P59090 65 aa2.13□□□□□ -2.07
VPS13B-208ENST00000521037 RPL39P62891 51 aaKnown RBP2.13□□□□□ -2.07
VPS13B-208ENST00000521037 HERVK_113P63121 156 aa2.13□□□□□ -2.07
VPS13B-208ENST00000521037 ZNF56Q15929 161 aa2.13□□□□□ -2.07
VPS13B-208ENST00000521037 Q5W150 140 aa2.13□□□□□ -2.07
VPS13B-208ENST00000521037 SFTA2Q6UW10 78 aa2.13□□□□□ -2.07
VPS13B-208ENST00000521037 FAM19A3Q7Z5A8 133 aa2.13□□□□□ -2.07
VPS13B-208ENST00000521037 LINC00643Q86TS7 51 aa2.13□□□□□ -2.07
VPS13B-208ENST00000521037 MUSTN1Q8IVN3 82 aa2.13□□□□□ -2.07
VPS13B-208ENST00000521037 DAND5Q8N907 189 aa2.13□□□□□ -2.07
VPS13B-208ENST00000521037 NDUFA12Q9UI09 145 aa2.13□□□□□ -2.07
VPS13B-208ENST00000521037 KLK12Q9UKR0 248 aa2.13□□□□□ -2.07
VPS13B-208ENST00000521037 A0A096LNI7 61 aa2.12□□□□□ -2.07
VPS13B-208ENST00000521037 TRAV4A0A0B4J268 109 aa2.12□□□□□ -2.07
VPS13B-208ENST00000521037 COX7A2LO14548 114 aa2.12□□□□□ -2.07
VPS13B-208ENST00000521037 COX6A2Q02221 97 aa2.12□□□□□ -2.07
VPS13B-208ENST00000521037 DEFB116Q30KQ4 102 aa2.12□□□□□ -2.07
VPS13B-208ENST00000521037 C1orf195Q5TG92 126 aa2.12□□□□□ -2.07
VPS13B-208ENST00000521037 ZNF706Q9Y5V0 76 aaPredicted RBP2.12□□□□□ -2.07
VPS13B-208ENST00000521037 TRAV13-2A0A0B4J235 113 aa2.11□□□□□ -2.07
VPS13B-208ENST00000521037 TRBV10-1A0A0K0K1A3 114 aa2.11□□□□□ -2.07
VPS13B-208ENST00000521037 TEX49A0A1B0GTD5 131 aa2.11□□□□□ -2.07
VPS13B-208ENST00000521037 A0A1B0GX51 115 aa2.11□□□□□ -2.07
VPS13B-208ENST00000521037 H0YGX0 51 aa2.11□□□□□ -2.07
VPS13B-208ENST00000521037 UQCRQO14949 82 aa2.11□□□□□ -2.07
VPS13B-208ENST00000521037 RPS28P62857 69 aaKnown RBP2.11□□□□□ -2.07
VPS13B-208ENST00000521037 LUZP6Q538Z0 58 aa2.11□□□□□ -2.07
VPS13B-208ENST00000521037 MEIG1Q5JSS6 88 aa2.11□□□□□ -2.07
VPS13B-208ENST00000521037 FAM74A4Q5TZK3 123 aa2.11□□□□□ -2.07
VPS13B-208ENST00000521037 SPANXA2-OT1Q8N9U9 137 aa2.11□□□□□ -2.07
VPS13B-208ENST00000521037 PRR34Q9NV39 138 aa2.11□□□□□ -2.07
VPS13B-208ENST00000521037 IGHV3-64A0A075B6Q5 118 aa2.1□□□□□ -2.07
VPS13B-208ENST00000521037 TRBV6-4A0A1B0GX49 114 aa2.1□□□□□ -2.07
VPS13B-208ENST00000521037 A0A1W2PNN7 141 aa2.1□□□□□ -2.07
VPS13B-208ENST00000521037 H7C2G1 150 aa2.1□□□□□ -2.07
VPS13B-208ENST00000521037 ATOX1O00244 68 aa2.1□□□□□ -2.07
VPS13B-208ENST00000521037 S100A7L2Q5SY68 101 aa2.1□□□□□ -2.07
VPS13B-208ENST00000521037 C3orf22Q8N5N4 141 aa2.1□□□□□ -2.07
VPS13B-208ENST00000521037 LINC00308Q8TCZ7 52 aa2.1□□□□□ -2.07
VPS13B-208ENST00000521037 RMI2Q96E14 147 aa2.1□□□□□ -2.07
VPS13B-208ENST00000521037 LINC00526Q96FQ7 95 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms