RNA–Protein interactions for RNA: ENST00000519560.5

SLIT3-206, Transcript of slit guidance ligand 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLIT3, Length 9,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-206ENST00000519560 SPINK7P58062 85 aa8.65□□□□□ -1.03
SLIT3-206ENST00000519560 PRAC1Q96KF2 57 aa8.65□□□□□ -1.03
SLIT3-206ENST00000519560 LINC01558Q9Y6Z2 57 aa8.64□□□□□ -1.03
SLIT3-206ENST00000519560 MAP1AP78559 2803 aaPredicted RBP8.63□□□□□ -1.03
SLIT3-206ENST00000519560 Q8N9P0 234 aaPredicted RBP8.63□□□□□ -1.03
SLIT3-206ENST00000519560 ZNF292O60281 2723 aa8.63□□□□□ -1.03
SLIT3-206ENST00000519560 ZCCHC13Q8WW36 166 aaKnown RBP8.62□□□□□ -1.03
SLIT3-206ENST00000519560 SETXQ7Z333 2677 aaKnown RBP8.59□□□□□ -1.03
SLIT3-206ENST00000519560 Q5XG85 94 aa8.59□□□□□ -1.03
SLIT3-206ENST00000519560 R4GN34 69 aa8.59□□□□□ -1.03
SLIT3-206ENST00000519560 Q5VV11 94 aa8.58□□□□□ -1.04
SLIT3-206ENST00000519560 KRTAP10-3P60369 221 aa8.56□□□□□ -1.04
SLIT3-206ENST00000519560 MMP24-AS1A0A0U1RRL7 71 aa8.55□□□□□ -1.04
SLIT3-206ENST00000519560 ROMO1P60602 79 aa8.54□□□□□ -1.04
SLIT3-206ENST00000519560 KMT2BQ9UMN6 2715 aaPredicted RBP8.53□□□□□ -1.04
SLIT3-206ENST00000519560 FP248Q71RG6 208 aaPredicted RBP8.53□□□□□ -1.04
SLIT3-206ENST00000519560 Q5W150 140 aa8.52□□□□□ -1.05
SLIT3-206ENST00000519560 ITPR2Q14571 2701 aa8.52□□□□□ -1.05
SLIT3-206ENST00000519560 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.51□□□□□ -1.05
SLIT3-206ENST00000519560 CHD7Q9P2D1 2997 aa8.5□□□□□ -1.05
SLIT3-206ENST00000519560 RPL37P61927 97 aaKnown RBP8.47□□□□□ -1.05
SLIT3-206ENST00000519560 TNP2Q05952 138 aa8.47□□□□□ -1.05
SLIT3-206ENST00000519560 ASB16-AS1Q495Z4 193 aa8.46□□□□□ -1.06
SLIT3-206ENST00000519560 APCP25054 2843 aa8.46□□□□□ -1.06
SLIT3-206ENST00000519560 CHD9Q3L8U1 2897 aa8.43□□□□□ -1.06
SLIT3-206ENST00000519560 NBEAL2Q6ZNJ1 2754 aa8.42□□□□□ -1.06
SLIT3-206ENST00000519560 H1FX-AS1Q4G0G2 97 aa8.42□□□□□ -1.06
SLIT3-206ENST00000519560 CYSTM1Q9H1C7 97 aa8.42□□□□□ -1.06
SLIT3-206ENST00000519560 PLAC8Q9NZF1 115 aa8.41□□□□□ -1.06
SLIT3-206ENST00000519560 C5orf42Q9H799 3197 aa8.4□□□□□ -1.06
SLIT3-206ENST00000519560 LINC00472Q9H8W2 130 aa8.4□□□□□ -1.06
SLIT3-206ENST00000519560 M0QZ58 72 aa8.4□□□□□ -1.07
SLIT3-206ENST00000519560 SEC61BP60468 96 aaKnown RBP8.38□□□□□ -1.07
SLIT3-206ENST00000519560 SPRR1AP35321 89 aa8.37□□□□□ -1.07
SLIT3-206ENST00000519560 NSD1Q96L73 2696 aaPredicted RBP8.37□□□□□ -1.07
SLIT3-206ENST00000519560 CFAP54Q96N23 3096 aa8.36□□□□□ -1.07
SLIT3-206ENST00000519560 PCNTO95613 3336 aa8.36□□□□□ -1.07
SLIT3-206ENST00000519560 A0A0C4DFX4 3053 aa8.36□□□□□ -1.07
SLIT3-206ENST00000519560 PLAC4Q8WY50 150 aa8.33□□□□□ -1.08
SLIT3-206ENST00000519560 UTP20O75691 2785 aaKnown RBP8.32□□□□□ -1.08
SLIT3-206ENST00000519560 KRTAP16-1A8MUX0 517 aa8.32□□□□□ -1.08
SLIT3-206ENST00000519560 SPRR1BP22528 89 aa8.31□□□□□ -1.08
SLIT3-206ENST00000519560 IGSF10Q6WRI0 2623 aa8.3□□□□□ -1.08
SLIT3-206ENST00000519560 KRTAP1-3Q8IUG1 177 aa8.3□□□□□ -1.08
SLIT3-206ENST00000519560 ADM2Q7Z4H4 148 aa8.27□□□□□ -1.09
SLIT3-206ENST00000519560 Q8NDZ9 215 aa8.26□□□□□ -1.09
SLIT3-206ENST00000519560 KRTAP1-1Q07627 177 aa8.24□□□□□ -1.09
SLIT3-206ENST00000519560 MGAQ8IWI9 3026 aa8.24□□□□□ -1.09
SLIT3-206ENST00000519560 Q6ZR54 194 aa8.23□□□□□ -1.09
SLIT3-206ENST00000519560 KRTAP26-1Q6PEX3 210 aa8.23□□□□□ -1.09
SLIT3-206ENST00000519560 ITPR1Q14643 2758 aa8.22□□□□□ -1.09
SLIT3-206ENST00000519560 SPATA8Q6RVD6 105 aa8.22□□□□□ -1.09
SLIT3-206ENST00000519560 PANO1I0J062 215 aa8.21□□□□□ -1.1
SLIT3-206ENST00000519560 Q5VSD8 79 aa8.21□□□□□ -1.1
SLIT3-206ENST00000519560 OXTP01178 125 aa8.19□□□□□ -1.1
SLIT3-206ENST00000519560 LAMA2P24043 3122 aaKnown RBP8.18□□□□□ -1.1
SLIT3-206ENST00000519560 UBR5O95071 2799 aaPredicted RBP8.18□□□□□ -1.1
SLIT3-206ENST00000519560 DSPP15924 2871 aaKnown RBP8.18□□□□□ -1.1
SLIT3-206ENST00000519560 UTRNP46939 3433 aa8.15□□□□□ -1.11
SLIT3-206ENST00000519560 A0A087X002 238 aa8.12□□□□□ -1.11
SLIT3-206ENST00000519560 C20orf166-AS1Q96NR2 134 aa8.11□□□□□ -1.11
SLIT3-206ENST00000519560 HTTP42858 3142 aa8.1□□□□□ -1.11
SLIT3-206ENST00000519560 KRTAP25-1Q3LHN0 102 aa8.1□□□□□ -1.11
SLIT3-206ENST00000519560 FLNCQ14315 2725 aa8.09□□□□□ -1.11
SLIT3-206ENST00000519560 FRYQ5TBA9 3013 aa8.06□□□□□ -1.12
SLIT3-206ENST00000519560 KRTAP1-5Q9BYS1 174 aa8.06□□□□□ -1.12
SLIT3-206ENST00000519560 KRTAP4-16G5E9R7 235 aaPredicted RBP8.04□□□□□ -1.12
SLIT3-206ENST00000519560 VPS13AQ96RL7 3174 aa8.03□□□□□ -1.12
SLIT3-206ENST00000519560 RANBP2P49792 3224 aaKnown RBP8.03□□□□□ -1.12
SLIT3-206ENST00000519560 LRBAP50851 2863 aa8.02□□□□□ -1.13
SLIT3-206ENST00000519560 LCE6AA0A183 80 aa8.01□□□□□ -1.13
SLIT3-206ENST00000519560 A6NN06 94 aa8.01□□□□□ -1.13
SLIT3-206ENST00000519560 KRTAP29-1A8MX34 341 aaPredicted RBP8.01□□□□□ -1.13
SLIT3-206ENST00000519560 KRTAP10-1P60331 282 aa8.01□□□□□ -1.13
SLIT3-206ENST00000519560 NDUFAF8A1L188 74 aa8□□□□□ -1.13
SLIT3-206ENST00000519560 A8MUU9 505 aa7.97□□□□□ -1.13
SLIT3-206ENST00000519560 KRTAP10-2P60368 255 aa7.97□□□□□ -1.13
SLIT3-206ENST00000519560 NIPBLQ6KC79 2804 aaeCLIP7.94□□□□□ -1.14
SLIT3-206ENST00000519560 HIVEP1P15822 2718 aa7.93□□□□□ -1.14
SLIT3-206ENST00000519560 TRIOO75962 3097 aa7.92□□□□□ -1.14
SLIT3-206ENST00000519560 A8MU10 97 aa7.91□□□□□ -1.14
SLIT3-206ENST00000519560 RPS29P62273 56 aaKnown RBP7.89□□□□□ -1.15
SLIT3-206ENST00000519560 ASH1LQ9NR48 2969 aaKnown RBP7.88□□□□□ -1.15
SLIT3-206ENST00000519560 NBEAQ8NFP9 2946 aa7.87□□□□□ -1.15
SLIT3-206ENST00000519560 C10orf95Q9H7T3 257 aa7.87□□□□□ -1.15
SLIT3-206ENST00000519560 KALRNO60229 2985 aa7.87□□□□□ -1.15
SLIT3-206ENST00000519560 WDFY4Q6ZS81 3184 aa7.86□□□□□ -1.15
SLIT3-206ENST00000519560 NOTCH2NLQ7Z3S9 236 aa7.84□□□□□ -1.15
SLIT3-206ENST00000519560 FRYLO94915 3013 aa7.84□□□□□ -1.15
SLIT3-206ENST00000519560 MKI67P46013 3256 aaKnown RBP7.83□□□□□ -1.16
SLIT3-206ENST00000519560 TNP1P09430 55 aa7.82□□□□□ -1.16
SLIT3-206ENST00000519560 TENM1Q9UKZ4 2725 aa7.81□□□□□ -1.16
SLIT3-206ENST00000519560 NF1P21359 2839 aa7.78□□□□□ -1.16
SLIT3-206ENST00000519560 PRUNE2Q8WUY3 3088 aa7.78□□□□□ -1.16
SLIT3-206ENST00000519560 TACC2O95359 2948 aa7.77□□□□□ -1.17
SLIT3-206ENST00000519560 LAMA3Q16787 3333 aa7.76□□□□□ -1.17
SLIT3-206ENST00000519560 CRYBG3Q68DQ2 2970 aa7.73□□□□□ -1.17
SLIT3-206ENST00000519560 FREM2Q5SZK8 3169 aa7.72□□□□□ -1.17
SLIT3-206ENST00000519560 TENM3Q9P273 2699 aa7.71□□□□□ -1.17
SLIT3-206ENST00000519560 CELSR2Q9HCU4 2923 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms