RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 HUWE1Q7Z6Z7 4374 aaKnown RBP0.47□□□□□ -2.33
SCARNA11.3-201ENST00000517276 TNXBP22105 4242 aa0.46□□□□□ -2.34
SCARNA11.3-201ENST00000517276 DEPDC5O75140 1603 aa0.46□□□□□ -2.34
SCARNA11.3-201ENST00000517276 OTOGQ6ZRI0 2925 aa0.46□□□□□ -2.34
SCARNA11.3-201ENST00000517276 UNC79Q9P2D8 2635 aa0.46□□□□□ -2.34
SCARNA11.3-201ENST00000517276 MAST1Q9Y2H9 1570 aa0.46□□□□□ -2.34
SCARNA11.3-201ENST00000517276 CHD8Q9HCK8 2581 aa0.46□□□□□ -2.34
SCARNA11.3-201ENST00000517276 TRANK1O15050 2925 aa0.45□□□□□ -2.34
SCARNA11.3-201ENST00000517276 SYCP2Q9BX26 1530 aa0.45□□□□□ -2.34
SCARNA11.3-201ENST00000517276 PRM1P04553 51 aa0.45□□□□□ -2.34
SCARNA11.3-201ENST00000517276 SERF2P84101 59 aa0.45□□□□□ -2.34
SCARNA11.3-201ENST00000517276 DSPP15924 2871 aaKnown RBP0.44□□□□□ -2.34
SCARNA11.3-201ENST00000517276 CLASP1Q7Z460 1538 aa0.44□□□□□ -2.34
SCARNA11.3-201ENST00000517276 KIAA0586Q9BVV6 1533 aa0.44□□□□□ -2.34
SCARNA11.3-201ENST00000517276 USP24Q9UPU5 2620 aa0.44□□□□□ -2.34
SCARNA11.3-201ENST00000517276 AGLP35573 1532 aa0.43□□□□□ -2.34
SCARNA11.3-201ENST00000517276 CROCC2H7BZ55 1655 aa0.43□□□□□ -2.34
SCARNA11.3-201ENST00000517276 FANCD2Q9BXW9 1451 aa0.43□□□□□ -2.34
SCARNA11.3-201ENST00000517276 RPS27P42677 84 aaKnown RBP0.43□□□□□ -2.34
SCARNA11.3-201ENST00000517276 RPS27LQ71UM5 84 aaKnown RBP0.43□□□□□ -2.34
SCARNA11.3-201ENST00000517276 C6orf48Q9UBA6 75 aa0.43□□□□□ -2.34
SCARNA11.3-201ENST00000517276 NAV2Q8IVL1 2488 aa0.42□□□□□ -2.34
SCARNA11.3-201ENST00000517276 M0R2T5 61 aa0.42□□□□□ -2.34
SCARNA11.3-201ENST00000517276 DEFB135Q30KP9 77 aa0.42□□□□□ -2.34
SCARNA11.3-201ENST00000517276 MUC16Q8WXI7 14507 aa0.41□□□□□ -2.34
SCARNA11.3-201ENST00000517276 UBR5O95071 2799 aaPredicted RBP0.41□□□□□ -2.34
SCARNA11.3-201ENST00000517276 PTPN13Q12923 2485 aa0.41□□□□□ -2.34
SCARNA11.3-201ENST00000517276 KMT2AQ03164 3969 aa0.41□□□□□ -2.34
SCARNA11.3-201ENST00000517276 EP300Q09472 2414 aaPredicted RBP0.4□□□□□ -2.34
SCARNA11.3-201ENST00000517276 MYCBP2O75592 4640 aa0.4□□□□□ -2.35
SCARNA11.3-201ENST00000517276 MAP1BP46821 2468 aaKnown RBP0.4□□□□□ -2.35
SCARNA11.3-201ENST00000517276 CELSR1Q9NYQ6 3014 aa0.4□□□□□ -2.35
SCARNA11.3-201ENST00000517276 SNRPGP15A8MWD9 76 aa0.4□□□□□ -2.35
SCARNA11.3-201ENST00000517276 KRTAP21-1Q3LI58 79 aa0.4□□□□□ -2.35
SCARNA11.3-201ENST00000517276 LINC00308Q8TCZ7 52 aa0.4□□□□□ -2.35
SCARNA11.3-201ENST00000517276 HECTD1Q9ULT8 2610 aa0.4□□□□□ -2.35
SCARNA11.3-201ENST00000517276 PKD1L1Q8TDX9 2849 aa0.4□□□□□ -2.35
SCARNA11.3-201ENST00000517276 EFCAB6Q5THR3 1501 aa0.39□□□□□ -2.35
SCARNA11.3-201ENST00000517276 AKAP13Q12802 2813 aa0.39□□□□□ -2.35
SCARNA11.3-201ENST00000517276 TOGARAM1Q9Y4F4 1720 aa0.39□□□□□ -2.35
SCARNA11.3-201ENST00000517276 PLNP26678 52 aa0.39□□□□□ -2.35
SCARNA11.3-201ENST00000517276 ANKRD36CQ5JPF3 1778 aa0.39□□□□□ -2.35
SCARNA11.3-201ENST00000517276 FAT4Q6V0I7 4981 aa0.38□□□□□ -2.35
SCARNA11.3-201ENST00000517276 H0YGX0 51 aa0.38□□□□□ -2.35
SCARNA11.3-201ENST00000517276 WT1-ASQ06250 92 aa0.38□□□□□ -2.35
SCARNA11.3-201ENST00000517276 DEFB106AQ8N104 65 aa0.38□□□□□ -2.35
SCARNA11.3-201ENST00000517276 CMC2Q9NRP2 79 aa0.38□□□□□ -2.35
SCARNA11.3-201ENST00000517276 TMEM167BQ9NRX6 74 aa0.38□□□□□ -2.35
SCARNA11.3-201ENST00000517276 S4R3F8 94 aa0.38□□□□□ -2.35
SCARNA11.3-201ENST00000517276 PCNX1Q96RV3 2341 aa0.38□□□□□ -2.35
SCARNA11.3-201ENST00000517276 LPAP08519 4548 aa0.38□□□□□ -2.35
SCARNA11.3-201ENST00000517276 WNK1Q9H4A3 2382 aa0.38□□□□□ -2.35
SCARNA11.3-201ENST00000517276 NCOR2Q9Y618 2525 aa0.37□□□□□ -2.35
SCARNA11.3-201ENST00000517276 TIMM8BQ9Y5J9 83 aaPredicted RBP0.37□□□□□ -2.35
SCARNA11.3-201ENST00000517276 ADCY10Q96PN6 1610 aa0.37□□□□□ -2.35
SCARNA11.3-201ENST00000517276 CDC42BPAQ5VT25 1732 aa0.36□□□□□ -2.35
SCARNA11.3-201ENST00000517276 H0YGG7 62 aa0.36□□□□□ -2.35
SCARNA11.3-201ENST00000517276 NBASA2RRP1 2371 aa0.36□□□□□ -2.35
SCARNA11.3-201ENST00000517276 HIVEP3Q5T1R4 2406 aa0.36□□□□□ -2.35
SCARNA11.3-201ENST00000517276 PRLHP81277 87 aa0.35□□□□□ -2.35
SCARNA11.3-201ENST00000517276 TFF3Q07654 80 aa0.35□□□□□ -2.35
SCARNA11.3-201ENST00000517276 ABCC8Q09428 1581 aa0.35□□□□□ -2.35
SCARNA11.3-201ENST00000517276 TNRC18O15417 2968 aaPredicted RBP0.35□□□□□ -2.35
SCARNA11.3-201ENST00000517276 LYSTQ99698 3801 aa0.35□□□□□ -2.35
SCARNA11.3-201ENST00000517276 SETXQ7Z333 2677 aaKnown RBP0.34□□□□□ -2.35
SCARNA11.3-201ENST00000517276 APC2O95996 2303 aa0.34□□□□□ -2.36
SCARNA11.3-201ENST00000517276 KRTAP5-10Q6L8G5 202 aa0.34□□□□□ -2.36
SCARNA11.3-201ENST00000517276 TENM3Q9P273 2699 aa0.34□□□□□ -2.36
SCARNA11.3-201ENST00000517276 PRRC2CQ9Y520 2896 aaKnown RBP0.34□□□□□ -2.36
SCARNA11.3-201ENST00000517276 CACNA1AO00555 2505 aa0.33□□□□□ -2.36
SCARNA11.3-201ENST00000517276 IGSF10Q6WRI0 2623 aa0.33□□□□□ -2.36
SCARNA11.3-201ENST00000517276 NRXN3Q9Y4C0 1643 aa0.33□□□□□ -2.36
SCARNA11.3-201ENST00000517276 ACANP16112 2415 aa0.33□□□□□ -2.36
SCARNA11.3-201ENST00000517276 CREBBPQ92793 2442 aa0.33□□□□□ -2.36
SCARNA11.3-201ENST00000517276 PKD1L2Q7Z442 2459 aa0.32□□□□□ -2.36
SCARNA11.3-201ENST00000517276 ABCA5Q8WWZ7 1642 aa0.32□□□□□ -2.36
SCARNA11.3-201ENST00000517276 SMIM27A0A1W2PRY6 76 aa0.32□□□□□ -2.36
SCARNA11.3-201ENST00000517276 CEP290O15078 2479 aa0.32□□□□□ -2.36
SCARNA11.3-201ENST00000517276 HRNRQ86YZ3 2850 aaPredicted RBP0.32□□□□□ -2.36
SCARNA11.3-201ENST00000517276 HMCN2Q8NDA2 5059 aa0.31□□□□□ -2.36
SCARNA11.3-201ENST00000517276 PKD1P98161 4303 aa0.31□□□□□ -2.36
SCARNA11.3-201ENST00000517276 ABRACLQ9P1F3 81 aa0.31□□□□□ -2.36
SCARNA11.3-201ENST00000517276 KAAG1Q9UBP8 84 aa0.31□□□□□ -2.36
SCARNA11.3-201ENST00000517276 LMO7Q8WWI1 1683 aa0.3□□□□□ -2.36
SCARNA11.3-201ENST00000517276 PHGR1C9JFL3 82 aa0.3□□□□□ -2.36
SCARNA11.3-201ENST00000517276 SPRR2DP22532 72 aa0.3□□□□□ -2.36
SCARNA11.3-201ENST00000517276 TOMM5Q8N4H5 51 aa0.3□□□□□ -2.36
SCARNA11.3-201ENST00000517276 NSD1Q96L73 2696 aaPredicted RBP0.3□□□□□ -2.36
SCARNA11.3-201ENST00000517276 A0A1B0GUL6 1792 aa0.29□□□□□ -2.36
SCARNA11.3-201ENST00000517276 LRP1BQ9NZR2 4599 aa0.29□□□□□ -2.36
SCARNA11.3-201ENST00000517276 LINC01546A6NGU7 62 aa0.29□□□□□ -2.36
SCARNA11.3-201ENST00000517276 H3BUA1 57 aa0.29□□□□□ -2.36
SCARNA11.3-201ENST00000517276 WFDC10BQ8IUB3 73 aa0.29□□□□□ -2.36
SCARNA11.3-201ENST00000517276 DMBT1Q9UGM3 2413 aaPredicted RBP0.29□□□□□ -2.36
SCARNA11.3-201ENST00000517276 HSPG2P98160 4391 aa0.29□□□□□ -2.36
SCARNA11.3-201ENST00000517276 IQGAP1P46940 1657 aa0.28□□□□□ -2.36
SCARNA11.3-201ENST00000517276 HECTD4Q9Y4D8 3996 aa0.28□□□□□ -2.37
SCARNA11.3-201ENST00000517276 DCHS2Q6V1P9 2916 aa0.27□□□□□ -2.37
SCARNA11.3-201ENST00000517276 DNAH9Q9NYC9 4486 aa0.27□□□□□ -2.37
SCARNA11.3-201ENST00000517276 VPS13BQ7Z7G8 4022 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms