RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 FCER1GP30273 86 aa0.35□□□□□ -2.35
SCARNA3-201ENST00000517097 NBASA2RRP1 2371 aa0.34□□□□□ -2.35
SCARNA3-201ENST00000517097 NCOR2Q9Y618 2525 aa0.34□□□□□ -2.35
SCARNA3-201ENST00000517097 K7EMI3 77 aa0.34□□□□□ -2.36
SCARNA3-201ENST00000517097 M0R2T5 61 aa0.34□□□□□ -2.36
SCARNA3-201ENST00000517097 DEFB130BP0DP73 79 aa0.34□□□□□ -2.36
SCARNA3-201ENST00000517097 DEFB130AP0DP74 79 aa0.34□□□□□ -2.36
SCARNA3-201ENST00000517097 ATRQ13535 2644 aa0.34□□□□□ -2.36
SCARNA3-201ENST00000517097 NCBP2-AS2Q69YL0 99 aa0.34□□□□□ -2.36
SCARNA3-201ENST00000517097 TENM3Q9P273 2699 aa0.34□□□□□ -2.36
SCARNA3-201ENST00000517097 NRXN3Q9Y4C0 1643 aa0.34□□□□□ -2.36
SCARNA3-201ENST00000517097 CSMD3Q7Z407 3707 aa0.34□□□□□ -2.36
SCARNA3-201ENST00000517097 APC2O95996 2303 aa0.33□□□□□ -2.36
SCARNA3-201ENST00000517097 DDX60Q8IY21 1712 aaKnown RBP0.33□□□□□ -2.36
SCARNA3-201ENST00000517097 UNC79Q9P2D8 2635 aa0.33□□□□□ -2.36
SCARNA3-201ENST00000517097 DEFB135Q30KP9 77 aa0.33□□□□□ -2.36
SCARNA3-201ENST00000517097 NMES1Q9C002 83 aa0.33□□□□□ -2.36
SCARNA3-201ENST00000517097 CHD8Q9HCK8 2581 aa0.33□□□□□ -2.36
SCARNA3-201ENST00000517097 EP300Q09472 2414 aaPredicted RBP0.32□□□□□ -2.36
SCARNA3-201ENST00000517097 SERF2P84101 59 aa0.32□□□□□ -2.36
SCARNA3-201ENST00000517097 CLASP1Q7Z460 1538 aa0.32□□□□□ -2.36
SCARNA3-201ENST00000517097 ADCY10Q96PN6 1610 aa0.31□□□□□ -2.36
SCARNA3-201ENST00000517097 MINOS1Q5TGZ0 78 aa0.31□□□□□ -2.36
SCARNA3-201ENST00000517097 ABCA5Q8WWZ7 1642 aa0.31□□□□□ -2.36
SCARNA3-201ENST00000517097 LMO7Q8WWI1 1683 aa0.3□□□□□ -2.36
SCARNA3-201ENST00000517097 IGIPA6NJ69 53 aa0.3□□□□□ -2.36
SCARNA3-201ENST00000517097 MAP1BP46821 2468 aaKnown RBP0.3□□□□□ -2.36
SCARNA3-201ENST00000517097 PTPN13Q12923 2485 aa0.3□□□□□ -2.36
SCARNA3-201ENST00000517097 UBR5O95071 2799 aaPredicted RBP0.3□□□□□ -2.36
SCARNA3-201ENST00000517097 AGLP35573 1532 aa0.29□□□□□ -2.36
SCARNA3-201ENST00000517097 PCNX1Q96RV3 2341 aa0.29□□□□□ -2.36
SCARNA3-201ENST00000517097 PKD1L1Q8TDX9 2849 aa0.29□□□□□ -2.36
SCARNA3-201ENST00000517097 HRNRQ86YZ3 2850 aaPredicted RBP0.29□□□□□ -2.36
SCARNA3-201ENST00000517097 REV3LO60673 3130 aa0.29□□□□□ -2.36
SCARNA3-201ENST00000517097 FANCD2Q9BXW9 1451 aa0.29□□□□□ -2.36
SCARNA3-201ENST00000517097 ACANP16112 2415 aa0.28□□□□□ -2.36
SCARNA3-201ENST00000517097 BSNQ9UPA5 3926 aa0.28□□□□□ -2.36
SCARNA3-201ENST00000517097 TNXBP22105 4242 aa0.28□□□□□ -2.36
SCARNA3-201ENST00000517097 PHGR1C9JFL3 82 aa0.28□□□□□ -2.36
SCARNA3-201ENST00000517097 H0YGG7 62 aa0.28□□□□□ -2.36
SCARNA3-201ENST00000517097 SPRR2DP22532 72 aa0.28□□□□□ -2.36
SCARNA3-201ENST00000517097 RPS27P42677 84 aaKnown RBP0.28□□□□□ -2.36
SCARNA3-201ENST00000517097 RPS27LQ71UM5 84 aaKnown RBP0.28□□□□□ -2.36
SCARNA3-201ENST00000517097 C6orf48Q9UBA6 75 aa0.28□□□□□ -2.36
SCARNA3-201ENST00000517097 CELSR1Q9NYQ6 3014 aa0.28□□□□□ -2.36
SCARNA3-201ENST00000517097 HIVEP3Q5T1R4 2406 aa0.27□□□□□ -2.37
SCARNA3-201ENST00000517097 ABCC8Q09428 1581 aa0.27□□□□□ -2.37
SCARNA3-201ENST00000517097 IQGAP1P46940 1657 aa0.27□□□□□ -2.37
SCARNA3-201ENST00000517097 S4R3F8 94 aa0.26□□□□□ -2.37
SCARNA3-201ENST00000517097 ANK2Q01484 3957 aa0.26□□□□□ -2.37
SCARNA3-201ENST00000517097 IGSF10Q6WRI0 2623 aa0.26□□□□□ -2.37
SCARNA3-201ENST00000517097 WT1-ASQ06250 92 aa0.25□□□□□ -2.37
SCARNA3-201ENST00000517097 SYNE1Q8NF91 8797 aaKnown RBP0.25□□□□□ -2.37
SCARNA3-201ENST00000517097 FAM208AQ9UK61 1670 aaKnown RBP0.24□□□□□ -2.37
SCARNA3-201ENST00000517097 MAST4O15021 2626 aa0.24□□□□□ -2.37
SCARNA3-201ENST00000517097 EFCAB6Q5THR3 1501 aa0.24□□□□□ -2.37
SCARNA3-201ENST00000517097 DEFB106AQ8N104 65 aa0.24□□□□□ -2.37
SCARNA3-201ENST00000517097 DSPP15924 2871 aaKnown RBP0.23□□□□□ -2.37
SCARNA3-201ENST00000517097 H0YGX0 51 aa0.23□□□□□ -2.37
SCARNA3-201ENST00000517097 PRLHP81277 87 aa0.23□□□□□ -2.37
SCARNA3-201ENST00000517097 TMEM167BQ9NRX6 74 aa0.23□□□□□ -2.37
SCARNA3-201ENST00000517097 CEP290O15078 2479 aa0.23□□□□□ -2.37
SCARNA3-201ENST00000517097 PRRC2CQ9Y520 2896 aaKnown RBP0.22□□□□□ -2.37
SCARNA3-201ENST00000517097 AHNAK2Q8IVF2 5795 aa0.22□□□□□ -2.37
SCARNA3-201ENST00000517097 SPRR2BP35325 72 aa0.22□□□□□ -2.37
SCARNA3-201ENST00000517097 LINC00308Q8TCZ7 52 aa0.22□□□□□ -2.37
SCARNA3-201ENST00000517097 LRP1Q07954 4544 aaKnown RBP0.22□□□□□ -2.37
SCARNA3-201ENST00000517097 CREBBPQ92793 2442 aa0.22□□□□□ -2.37
SCARNA3-201ENST00000517097 TRANK1O15050 2925 aa0.21□□□□□ -2.38
SCARNA3-201ENST00000517097 KIF21BO75037 1637 aa0.2□□□□□ -2.38
SCARNA3-201ENST00000517097 FLNBO75369 2602 aaKnown RBP0.2□□□□□ -2.38
SCARNA3-201ENST00000517097 PLNP26678 52 aa0.2□□□□□ -2.38
SCARNA3-201ENST00000517097 CMC2Q9NRP2 79 aa0.2□□□□□ -2.38
SCARNA3-201ENST00000517097 DMBT1Q9UGM3 2413 aaPredicted RBP0.19□□□□□ -2.38
SCARNA3-201ENST00000517097 ALMS1Q8TCU4 4167 aa0.19□□□□□ -2.38
SCARNA3-201ENST00000517097 SNRPGP15A8MWD9 76 aa0.19□□□□□ -2.38
SCARNA3-201ENST00000517097 H3BUA1 57 aa0.19□□□□□ -2.38
SCARNA3-201ENST00000517097 FAT2Q9NYQ8 4349 aa0.19□□□□□ -2.38
SCARNA3-201ENST00000517097 MYCBP2O75592 4640 aa0.18□□□□□ -2.38
SCARNA3-201ENST00000517097 PKD1L2Q7Z442 2459 aa0.18□□□□□ -2.38
SCARNA3-201ENST00000517097 FAT4Q6V0I7 4981 aa0.18□□□□□ -2.38
SCARNA3-201ENST00000517097 TNRC18O15417 2968 aaPredicted RBP0.18□□□□□ -2.38
SCARNA3-201ENST00000517097 CACNA1AO00555 2505 aa0.17□□□□□ -2.38
SCARNA3-201ENST00000517097 IQGAP2Q13576 1575 aa0.17□□□□□ -2.38
SCARNA3-201ENST00000517097 TIMM8BQ9Y5J9 83 aaPredicted RBP0.17□□□□□ -2.38
SCARNA3-201ENST00000517097 SPTBN4Q9H254 2564 aa0.16□□□□□ -2.38
SCARNA3-201ENST00000517097 HECTD1Q9ULT8 2610 aa0.16□□□□□ -2.38
SCARNA3-201ENST00000517097 SETXQ7Z333 2677 aaKnown RBP0.15□□□□□ -2.39
SCARNA3-201ENST00000517097 C9orf92A6NGG3 77 aa0.15□□□□□ -2.39
SCARNA3-201ENST00000517097 DCHS2Q6V1P9 2916 aa0.15□□□□□ -2.39
SCARNA3-201ENST00000517097 ACACAQ13085 2346 aa0.15□□□□□ -2.39
SCARNA3-201ENST00000517097 HUWE1Q7Z6Z7 4374 aaKnown RBP0.15□□□□□ -2.39
SCARNA3-201ENST00000517097 H3BNG1 76 aa0.14□□□□□ -2.39
SCARNA3-201ENST00000517097 ABRACLQ9P1F3 81 aa0.14□□□□□ -2.39
SCARNA3-201ENST00000517097 SPG11Q96JI7 2443 aa0.14□□□□□ -2.39
SCARNA3-201ENST00000517097 PRKDCP78527 4128 aaKnown RBP0.14□□□□□ -2.39
SCARNA3-201ENST00000517097 AKAP13Q12802 2813 aa0.14□□□□□ -2.39
SCARNA3-201ENST00000517097 NFAT5O94916 1531 aa0.13□□□□□ -2.39
SCARNA3-201ENST00000517097 IGLV5-48A0A075B6I7 105 aa0.13□□□□□ -2.39
SCARNA3-201ENST00000517097 SMIM27A0A1W2PRY6 76 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms