RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 DCHS2Q6V1P9 2916 aa1.28□□□□□ -2.2
RNU1-40P-201ENST00000516816 ATMQ13315 3056 aa1.28□□□□□ -2.2
RNU1-40P-201ENST00000516816 IGLV5-52A0A0A0MRZ9 124 aa1.28□□□□□ -2.2
RNU1-40P-201ENST00000516816 K7EIL1 84 aa1.28□□□□□ -2.2
RNU1-40P-201ENST00000516816 K7ERS5 55 aa1.28□□□□□ -2.2
RNU1-40P-201ENST00000516816 UQCR11O14957 56 aa1.28□□□□□ -2.2
RNU1-40P-201ENST00000516816 KRTAP24-1Q3LI83 254 aa1.28□□□□□ -2.2
RNU1-40P-201ENST00000516816 FAM229BQ4G0N7 80 aa1.28□□□□□ -2.2
RNU1-40P-201ENST00000516816 LINC01554Q52M75 96 aa1.28□□□□□ -2.2
RNU1-40P-201ENST00000516816 C1orf134Q5TEV5 83 aa1.28□□□□□ -2.2
RNU1-40P-201ENST00000516816 SPINK6Q6UWN8 80 aa1.28□□□□□ -2.2
RNU1-40P-201ENST00000516816 Q6ZR54 194 aa1.28□□□□□ -2.2
RNU1-40P-201ENST00000516816 CIRBP-AS1Q8TBR5 109 aa1.28□□□□□ -2.2
RNU1-40P-201ENST00000516816 WWC2-AS2Q96NR7 200 aa1.28□□□□□ -2.2
RNU1-40P-201ENST00000516816 RETNLBQ9BQ08 111 aa1.28□□□□□ -2.2
RNU1-40P-201ENST00000516816 SONP18583 2426 aaKnown RBP1.28□□□□□ -2.2
RNU1-40P-201ENST00000516816 ABCA12Q86UK0 2595 aa1.28□□□□□ -2.2
RNU1-40P-201ENST00000516816 DMXL1Q9Y485 3027 aa1.28□□□□□ -2.2
RNU1-40P-201ENST00000516816 BOD1L1Q8NFC6 3051 aa1.28□□□□□ -2.2
RNU1-40P-201ENST00000516816 DCHS1Q96JQ0 3298 aa1.28□□□□□ -2.21
RNU1-40P-201ENST00000516816 MMP24-AS1A0A0U1RRL7 71 aa1.27□□□□□ -2.21
RNU1-40P-201ENST00000516816 RTL8CO15255 209 aa1.27□□□□□ -2.21
RNU1-40P-201ENST00000516816 IGLV7-43P04211 117 aa1.27□□□□□ -2.21
RNU1-40P-201ENST00000516816 LINC00483Q53H64 154 aa1.27□□□□□ -2.21
RNU1-40P-201ENST00000516816 ZFHX4Q86UP3 3567 aa1.27□□□□□ -2.21
RNU1-40P-201ENST00000516816 ITPR3Q14573 2671 aa1.26□□□□□ -2.21
RNU1-40P-201ENST00000516816 ASPMQ8IZT6 3477 aa1.26□□□□□ -2.21
RNU1-40P-201ENST00000516816 PKD1L2Q7Z442 2459 aa1.26□□□□□ -2.21
RNU1-40P-201ENST00000516816 A0A087WTM6 91 aa1.26□□□□□ -2.21
RNU1-40P-201ENST00000516816 A0A0G2JQZ4 141 aa1.26□□□□□ -2.21
RNU1-40P-201ENST00000516816 CHTF8P0CG12 524 aa1.26□□□□□ -2.21
RNU1-40P-201ENST00000516816 CASC10Q5T4H9 136 aa1.26□□□□□ -2.21
RNU1-40P-201ENST00000516816 XP32Q5T750 250 aa1.26□□□□□ -2.21
RNU1-40P-201ENST00000516816 Q5VV11 94 aa1.26□□□□□ -2.21
RNU1-40P-201ENST00000516816 KRTAP7-1Q8IUC3 87 aa1.26□□□□□ -2.21
RNU1-40P-201ENST00000516816 SPACA4Q8TDM5 124 aa1.26□□□□□ -2.21
RNU1-40P-201ENST00000516816 PLAC8Q9NZF1 115 aa1.26□□□□□ -2.21
RNU1-40P-201ENST00000516816 PSORS1C2Q9UIG4 136 aa1.26□□□□□ -2.21
RNU1-40P-201ENST00000516816 MYO18BQ8IUG5 2567 aa1.26□□□□□ -2.21
RNU1-40P-201ENST00000516816 CSMD1Q96PZ7 3565 aa1.26□□□□□ -2.21
RNU1-40P-201ENST00000516816 CHD8Q9HCK8 2581 aa1.25□□□□□ -2.21
RNU1-40P-201ENST00000516816 ZFYVE26Q68DK2 2539 aa1.25□□□□□ -2.21
RNU1-40P-201ENST00000516816 NOTCH2Q04721 2471 aa1.25□□□□□ -2.21
RNU1-40P-201ENST00000516816 MAP1AP78559 2803 aaPredicted RBP1.25□□□□□ -2.21
RNU1-40P-201ENST00000516816 SPINK1P00995 79 aa1.25□□□□□ -2.21
RNU1-40P-201ENST00000516816 HRES1P13985 223 aa1.25□□□□□ -2.21
RNU1-40P-201ENST00000516816 MIR22HGQ0VDD5 57 aa1.25□□□□□ -2.21
RNU1-40P-201ENST00000516816 ACANP16112 2415 aa1.25□□□□□ -2.21
RNU1-40P-201ENST00000516816 DMDP11532 3685 aa1.25□□□□□ -2.21
RNU1-40P-201ENST00000516816 FLNAP21333 2647 aaKnown RBP1.24□□□□□ -2.21
RNU1-40P-201ENST00000516816 JMJD1CQ15652 2540 aa1.24□□□□□ -2.21
RNU1-40P-201ENST00000516816 PIEZO1Q92508 2521 aa1.24□□□□□ -2.21
RNU1-40P-201ENST00000516816 ZNF462Q96JM2 2506 aa1.24□□□□□ -2.21
RNU1-40P-201ENST00000516816 CCDC168Q8NDH2 2452 aa1.24□□□□□ -2.21
RNU1-40P-201ENST00000516816 ITPR1Q14643 2758 aa1.24□□□□□ -2.21
RNU1-40P-201ENST00000516816 KRTAP16-1A8MUX0 517 aa1.24□□□□□ -2.21
RNU1-40P-201ENST00000516816 LY6G6CO95867 125 aa1.24□□□□□ -2.21
RNU1-40P-201ENST00000516816 KRTAP13-1Q8IUC0 172 aa1.24□□□□□ -2.21
RNU1-40P-201ENST00000516816 TYMSOSQ8TAI1 123 aa1.24□□□□□ -2.21
RNU1-40P-201ENST00000516816 Q96NJ1 140 aa1.24□□□□□ -2.21
RNU1-40P-201ENST00000516816 MXRA5Q9NR99 2828 aa1.24□□□□□ -2.21
RNU1-40P-201ENST00000516816 SMG1Q96Q15 3661 aaKnown RBP1.24□□□□□ -2.21
RNU1-40P-201ENST00000516816 CRYBG3Q68DQ2 2970 aa1.23□□□□□ -2.21
RNU1-40P-201ENST00000516816 ASH1LQ9NR48 2969 aaKnown RBP1.23□□□□□ -2.21
RNU1-40P-201ENST00000516816 POLQO75417 2590 aa1.23□□□□□ -2.21
RNU1-40P-201ENST00000516816 APCP25054 2843 aa1.23□□□□□ -2.21
RNU1-40P-201ENST00000516816 BSNQ9UPA5 3926 aa1.23□□□□□ -2.21
RNU1-40P-201ENST00000516816 CENPEQ02224 2701 aa1.23□□□□□ -2.21
RNU1-40P-201ENST00000516816 CFAP46Q8IYW2 2715 aa1.23□□□□□ -2.21
RNU1-40P-201ENST00000516816 IGKV2D-30A0A075B6S6 120 aa1.23□□□□□ -2.21
RNU1-40P-201ENST00000516816 A6NN06 94 aa1.23□□□□□ -2.21
RNU1-40P-201ENST00000516816 IGKV2-30P06310 120 aa1.23□□□□□ -2.21
RNU1-40P-201ENST00000516816 SPATA8Q6RVD6 105 aa1.23□□□□□ -2.21
RNU1-40P-201ENST00000516816 CAMK2N1Q7Z7J9 78 aa1.23□□□□□ -2.21
RNU1-40P-201ENST00000516816 DMAC1Q96GE9 116 aa1.23□□□□□ -2.21
RNU1-40P-201ENST00000516816 IGSF10Q6WRI0 2623 aa1.23□□□□□ -2.21
RNU1-40P-201ENST00000516816 TEP1Q99973 2627 aaKnown RBP1.23□□□□□ -2.21
RNU1-40P-201ENST00000516816 ITPR2Q14571 2701 aa1.23□□□□□ -2.21
RNU1-40P-201ENST00000516816 SETD2Q9BYW2 2564 aaPredicted RBP1.22□□□□□ -2.21
RNU1-40P-201ENST00000516816 CELSR1Q9NYQ6 3014 aa1.22□□□□□ -2.21
RNU1-40P-201ENST00000516816 CACNA1AO00555 2505 aa1.22□□□□□ -2.21
RNU1-40P-201ENST00000516816 SETXQ7Z333 2677 aaKnown RBP1.22□□□□□ -2.21
RNU1-40P-201ENST00000516816 RPS29P62273 56 aaKnown RBP1.22□□□□□ -2.21
RNU1-40P-201ENST00000516816 KRTAP4-8Q9BYQ9 185 aa1.22□□□□□ -2.21
RNU1-40P-201ENST00000516816 KRTAP1-5Q9BYS1 174 aa1.22□□□□□ -2.21
RNU1-40P-201ENST00000516816 ZFHX3Q15911 3703 aa1.22□□□□□ -2.21
RNU1-40P-201ENST00000516816 EPG5Q9HCE0 2579 aa1.22□□□□□ -2.21
RNU1-40P-201ENST00000516816 CELSR2Q9HCU4 2923 aa1.22□□□□□ -2.21
RNU1-40P-201ENST00000516816 COL12A1Q99715 3063 aa1.21□□□□□ -2.21
RNU1-40P-201ENST00000516816 NBEAL2Q6ZNJ1 2754 aa1.21□□□□□ -2.22
RNU1-40P-201ENST00000516816 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.21□□□□□ -2.22
RNU1-40P-201ENST00000516816 SPINK7P58062 85 aa1.21□□□□□ -2.22
RNU1-40P-201ENST00000516816 Q5W150 140 aa1.21□□□□□ -2.22
RNU1-40P-201ENST00000516816 Q6ZRN7 208 aaPredicted RBP1.21□□□□□ -2.22
RNU1-40P-201ENST00000516816 KRTAP11-1Q8IUC1 163 aa1.21□□□□□ -2.22
RNU1-40P-201ENST00000516816 ANAPC11Q9NYG5 84 aa1.21□□□□□ -2.22
RNU1-40P-201ENST00000516816 FBN2P35556 2912 aa1.21□□□□□ -2.22
RNU1-40P-201ENST00000516816 LAMA5O15230 3695 aa1.21□□□□□ -2.22
RNU1-40P-201ENST00000516816 GCN1Q92616 2671 aaKnown RBP1.21□□□□□ -2.22
RNU1-40P-201ENST00000516816 PDZD2O15018 2839 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms