RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 A0A0G2JQZ4 141 aa8.02□□□□□ -1.13
SMAD1-215ENST00000515385 A0A1W2PNN7 141 aa8.02□□□□□ -1.13
SMAD1-215ENST00000515385 KRTAP10-3P60369 221 aa8.02□□□□□ -1.13
SMAD1-215ENST00000515385 SPAG11AQ6PDA7 123 aa8.02□□□□□ -1.13
SMAD1-215ENST00000515385 PTPN13Q12923 2485 aa8□□□□□ -1.13
SMAD1-215ENST00000515385 MMP24-AS1A0A0U1RRL7 71 aa8□□□□□ -1.13
SMAD1-215ENST00000515385 TENM4Q6N022 2769 aa7.99□□□□□ -1.13
SMAD1-215ENST00000515385 DNAH10OSP0CZ25 163 aa7.99□□□□□ -1.13
SMAD1-215ENST00000515385 SPRR1BP22528 89 aa7.98□□□□□ -1.13
SMAD1-215ENST00000515385 TEX15Q9BXT5 2789 aa7.98□□□□□ -1.13
SMAD1-215ENST00000515385 SPINK7P58062 85 aa7.98□□□□□ -1.13
SMAD1-215ENST00000515385 Q6ZR54 194 aa7.98□□□□□ -1.13
SMAD1-215ENST00000515385 APCP25054 2843 aa7.97□□□□□ -1.13
SMAD1-215ENST00000515385 HECTD1Q9ULT8 2610 aa7.97□□□□□ -1.13
SMAD1-215ENST00000515385 UTP20O75691 2785 aaKnown RBP7.97□□□□□ -1.13
SMAD1-215ENST00000515385 NAV2Q8IVL1 2488 aa7.96□□□□□ -1.13
SMAD1-215ENST00000515385 PCOTHQ58A44 107 aa7.96□□□□□ -1.13
SMAD1-215ENST00000515385 FBN2P35556 2912 aa7.96□□□□□ -1.14
SMAD1-215ENST00000515385 H0Y9J4 135 aa7.96□□□□□ -1.14
SMAD1-215ENST00000515385 KRTAP1-1Q07627 177 aa7.96□□□□□ -1.14
SMAD1-215ENST00000515385 DEFB131BA0A096LNP1 70 aa7.94□□□□□ -1.14
SMAD1-215ENST00000515385 PRAC1Q96KF2 57 aa7.94□□□□□ -1.14
SMAD1-215ENST00000515385 HRES1P13985 223 aa7.94□□□□□ -1.14
SMAD1-215ENST00000515385 MAST4O15021 2626 aa7.93□□□□□ -1.14
SMAD1-215ENST00000515385 PRLHP81277 87 aa7.93□□□□□ -1.14
SMAD1-215ENST00000515385 IGKV2-24A0A0C4DH68 120 aa7.92□□□□□ -1.14
SMAD1-215ENST00000515385 UBR5O95071 2799 aaPredicted RBP7.91□□□□□ -1.14
SMAD1-215ENST00000515385 LRRK2Q5S007 2527 aa7.91□□□□□ -1.14
SMAD1-215ENST00000515385 NBEAL2Q6ZNJ1 2754 aa7.91□□□□□ -1.14
SMAD1-215ENST00000515385 NIPBLQ6KC79 2804 aaeCLIP7.9□□□□□ -1.14
SMAD1-215ENST00000515385 FLNCQ14315 2725 aa7.89□□□□□ -1.15
SMAD1-215ENST00000515385 POLQO75417 2590 aa7.89□□□□□ -1.15
SMAD1-215ENST00000515385 RTL8CO15255 209 aa7.87□□□□□ -1.15
SMAD1-215ENST00000515385 C8orf17Q9NRJ1 99 aa7.87□□□□□ -1.15
SMAD1-215ENST00000515385 CASC10Q5T4H9 136 aa7.85□□□□□ -1.15
SMAD1-215ENST00000515385 HIVEP2P31629 2446 aa7.85□□□□□ -1.15
SMAD1-215ENST00000515385 ADM2Q7Z4H4 148 aa7.83□□□□□ -1.16
SMAD1-215ENST00000515385 SONP18583 2426 aaKnown RBP7.82□□□□□ -1.16
SMAD1-215ENST00000515385 CUBNO60494 3623 aa7.82□□□□□ -1.16
SMAD1-215ENST00000515385 RETNLBQ9BQ08 111 aa7.82□□□□□ -1.16
SMAD1-215ENST00000515385 ANK3Q12955 4377 aaKnown RBP7.81□□□□□ -1.16
SMAD1-215ENST00000515385 A0A096LNI7 61 aa7.81□□□□□ -1.16
SMAD1-215ENST00000515385 Q96NJ1 140 aa7.81□□□□□ -1.16
SMAD1-215ENST00000515385 NF1P21359 2839 aa7.81□□□□□ -1.16
SMAD1-215ENST00000515385 ACYP2P14621 99 aa7.8□□□□□ -1.16
SMAD1-215ENST00000515385 MRPL34Q9BQ48 92 aaKnown RBP7.8□□□□□ -1.16
SMAD1-215ENST00000515385 NOTCH2Q04721 2471 aa7.8□□□□□ -1.16
SMAD1-215ENST00000515385 A0A1B0GVX0 72 aa7.8□□□□□ -1.16
SMAD1-215ENST00000515385 CDK2AP2O75956 126 aa7.77□□□□□ -1.17
SMAD1-215ENST00000515385 SPATA8Q6RVD6 105 aa7.77□□□□□ -1.17
SMAD1-215ENST00000515385 ITPR3Q14573 2671 aa7.76□□□□□ -1.17
SMAD1-215ENST00000515385 SETD2Q9BYW2 2564 aaPredicted RBP7.76□□□□□ -1.17
SMAD1-215ENST00000515385 UNC79Q9P2D8 2635 aa7.75□□□□□ -1.17
SMAD1-215ENST00000515385 IGHV6-1A0A0B4J1U7 121 aa7.74□□□□□ -1.17
SMAD1-215ENST00000515385 CENPEQ02224 2701 aa7.73□□□□□ -1.17
SMAD1-215ENST00000515385 A0A1B0GU69 56 aa7.72□□□□□ -1.17
SMAD1-215ENST00000515385 ZNF469Q96JG9 3925 aaPredicted RBP7.71□□□□□ -1.17
SMAD1-215ENST00000515385 ZNF706Q9Y5V0 76 aaPredicted RBP7.71□□□□□ -1.18
SMAD1-215ENST00000515385 KRTAP11-1Q8IUC1 163 aa7.7□□□□□ -1.18
SMAD1-215ENST00000515385 ABCA12Q86UK0 2595 aa7.7□□□□□ -1.18
SMAD1-215ENST00000515385 ITPR2Q14571 2701 aa7.7□□□□□ -1.18
SMAD1-215ENST00000515385 DMAC1Q96GE9 116 aa7.69□□□□□ -1.18
SMAD1-215ENST00000515385 C14orf177Q52M58 125 aa7.69□□□□□ -1.18
SMAD1-215ENST00000515385 CSAG1Q6PB30 78 aa7.69□□□□□ -1.18
SMAD1-215ENST00000515385 OXLD1Q5BKU9 147 aa7.68□□□□□ -1.18
SMAD1-215ENST00000515385 KRTAP13-1Q8IUC0 172 aa7.68□□□□□ -1.18
SMAD1-215ENST00000515385 CCDC168Q8NDH2 2452 aa7.68□□□□□ -1.18
SMAD1-215ENST00000515385 UQCR11O14957 56 aa7.67□□□□□ -1.18
SMAD1-215ENST00000515385 MIR22HGQ0VDD5 57 aa7.67□□□□□ -1.18
SMAD1-215ENST00000515385 KRTAP13-3Q3SY46 172 aa7.67□□□□□ -1.18
SMAD1-215ENST00000515385 FLNAP21333 2647 aaKnown RBP7.66□□□□□ -1.18
SMAD1-215ENST00000515385 LINC00483Q53H64 154 aa7.66□□□□□ -1.18
SMAD1-215ENST00000515385 IGLV9-49A0A0B4J1Y8 123 aa7.65□□□□□ -1.18
SMAD1-215ENST00000515385 C1orf134Q5TEV5 83 aa7.64□□□□□ -1.19
SMAD1-215ENST00000515385 KRTAP10-11P60412 298 aa7.63□□□□□ -1.19
SMAD1-215ENST00000515385 HIVEP1P15822 2718 aa7.62□□□□□ -1.19
SMAD1-215ENST00000515385 SMR3AQ99954 134 aa7.62□□□□□ -1.19
SMAD1-215ENST00000515385 Q5W150 140 aa7.61□□□□□ -1.19
SMAD1-215ENST00000515385 CHTF8P0CG12 524 aa7.61□□□□□ -1.19
SMAD1-215ENST00000515385 K7EIL1 84 aa7.6□□□□□ -1.19
SMAD1-215ENST00000515385 ROMO1P60602 79 aa7.6□□□□□ -1.19
SMAD1-215ENST00000515385 ALMS1Q8TCU4 4167 aa7.59□□□□□ -1.19
SMAD1-215ENST00000515385 DNAH1Q9P2D7 4330 aa7.59□□□□□ -1.19
SMAD1-215ENST00000515385 NOTCH2NLQ7Z3S9 236 aa7.59□□□□□ -1.19
SMAD1-215ENST00000515385 F8P00451 2351 aa7.58□□□□□ -1.2
SMAD1-215ENST00000515385 TEP1Q99973 2627 aaKnown RBP7.57□□□□□ -1.2
SMAD1-215ENST00000515385 MTORP42345 2549 aa7.57□□□□□ -1.2
SMAD1-215ENST00000515385 VWFP04275 2813 aa7.56□□□□□ -1.2
SMAD1-215ENST00000515385 TENM2Q9NT68 2774 aa7.56□□□□□ -1.2
SMAD1-215ENST00000515385 WWC2-AS2Q96NR7 200 aa7.55□□□□□ -1.2
SMAD1-215ENST00000515385 FAM229AH3BQW9 127 aa7.54□□□□□ -1.2
SMAD1-215ENST00000515385 INAFM1C9JVW0 142 aa7.52□□□□□ -1.21
SMAD1-215ENST00000515385 ZNF861PO60384 105 aa7.52□□□□□ -1.21
SMAD1-215ENST00000515385 OTOGQ6ZRI0 2925 aa7.52□□□□□ -1.21
SMAD1-215ENST00000515385 KRTAP1-5Q9BYS1 174 aa7.51□□□□□ -1.21
SMAD1-215ENST00000515385 PDZD2O15018 2839 aa7.51□□□□□ -1.21
SMAD1-215ENST00000515385 ACANP16112 2415 aa7.51□□□□□ -1.21
SMAD1-215ENST00000515385 IGKV2-30P06310 120 aa7.5□□□□□ -1.21
SMAD1-215ENST00000515385 KRTAP25-1Q3LHN0 102 aa7.47□□□□□ -1.21
SMAD1-215ENST00000515385 SPINK6Q6UWN8 80 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms