RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 Q8NDZ9 215 aa4.36□□□□□ -1.71
CCDC30-214ENST00000514642 M0QZ58 72 aa4.35□□□□□ -1.71
CCDC30-214ENST00000514642 FLNBO75369 2602 aaKnown RBP4.34□□□□□ -1.71
CCDC30-214ENST00000514642 Q8N9P0 234 aaPredicted RBP4.34□□□□□ -1.71
CCDC30-214ENST00000514642 H1FX-AS1Q4G0G2 97 aa4.34□□□□□ -1.72
CCDC30-214ENST00000514642 FLNAP21333 2647 aaKnown RBP4.34□□□□□ -1.72
CCDC30-214ENST00000514642 ITPR3Q14573 2671 aa4.33□□□□□ -1.72
CCDC30-214ENST00000514642 Q75L30 129 aa4.33□□□□□ -1.72
CCDC30-214ENST00000514642 Q5XG85 94 aa4.33□□□□□ -1.72
CCDC30-214ENST00000514642 OCR1Q9BZK8 76 aa4.32□□□□□ -1.72
CCDC30-214ENST00000514642 ASB16-AS1Q495Z4 193 aa4.32□□□□□ -1.72
CCDC30-214ENST00000514642 ADM2Q7Z4H4 148 aa4.32□□□□□ -1.72
CCDC30-214ENST00000514642 RPL37P61927 97 aaKnown RBP4.31□□□□□ -1.72
CCDC30-214ENST00000514642 BAHCC1Q9P281 2608 aa4.3□□□□□ -1.72
CCDC30-214ENST00000514642 Q1T7F1 81 aa4.3□□□□□ -1.72
CCDC30-214ENST00000514642 LUZP6Q538Z0 58 aa4.3□□□□□ -1.72
CCDC30-214ENST00000514642 H7BZZ5 65 aa4.29□□□□□ -1.72
CCDC30-214ENST00000514642 CEP350Q5VT06 3117 aa4.29□□□□□ -1.72
CCDC30-214ENST00000514642 SETD2Q9BYW2 2564 aaPredicted RBP4.28□□□□□ -1.72
CCDC30-214ENST00000514642 USP24Q9UPU5 2620 aa4.28□□□□□ -1.72
CCDC30-214ENST00000514642 C20orf166-AS1Q96NR2 134 aa4.28□□□□□ -1.72
CCDC30-214ENST00000514642 KRTAP4-16G5E9R7 235 aaPredicted RBP4.28□□□□□ -1.72
CCDC30-214ENST00000514642 A0A0A0MQY5 61 aa4.25□□□□□ -1.73
CCDC30-214ENST00000514642 KRTAP13-2Q52LG2 175 aa4.24□□□□□ -1.73
CCDC30-214ENST00000514642 XIRP2A4UGR9 3374 aa4.23□□□□□ -1.73
CCDC30-214ENST00000514642 CFAP46Q8IYW2 2715 aa4.22□□□□□ -1.73
CCDC30-214ENST00000514642 MGAM2Q2M2H8 2515 aa4.22□□□□□ -1.73
CCDC30-214ENST00000514642 KRTAP11-1Q8IUC1 163 aa4.21□□□□□ -1.74
CCDC30-214ENST00000514642 LINC01558Q9Y6Z2 57 aa4.2□□□□□ -1.74
CCDC30-214ENST00000514642 KRTAP29-1A8MX34 341 aaPredicted RBP4.2□□□□□ -1.74
CCDC30-214ENST00000514642 A8MUU9 505 aa4.19□□□□□ -1.74
CCDC30-214ENST00000514642 PRAC1Q96KF2 57 aa4.19□□□□□ -1.74
CCDC30-214ENST00000514642 KRTAP13-1Q8IUC0 172 aa4.19□□□□□ -1.74
CCDC30-214ENST00000514642 BPTFQ12830 3046 aa4.18□□□□□ -1.74
CCDC30-214ENST00000514642 MKI67P46013 3256 aaKnown RBP4.18□□□□□ -1.74
CCDC30-214ENST00000514642 KMT2BQ9UMN6 2715 aaPredicted RBP4.16□□□□□ -1.74
CCDC30-214ENST00000514642 MAST4O15021 2626 aa4.16□□□□□ -1.74
CCDC30-214ENST00000514642 KRTAP16-1A8MUX0 517 aa4.16□□□□□ -1.74
CCDC30-214ENST00000514642 TPRXLQ17RH7 258 aa4.16□□□□□ -1.74
CCDC30-214ENST00000514642 ATRQ13535 2644 aa4.15□□□□□ -1.74
CCDC30-214ENST00000514642 KRTAP7-1Q8IUC3 87 aa4.14□□□□□ -1.75
CCDC30-214ENST00000514642 CHD7Q9P2D1 2997 aa4.14□□□□□ -1.75
CCDC30-214ENST00000514642 CHD9Q3L8U1 2897 aa4.13□□□□□ -1.75
CCDC30-214ENST00000514642 ROMO1P60602 79 aa4.13□□□□□ -1.75
CCDC30-214ENST00000514642 NOTCH2NLQ7Z3S9 236 aa4.12□□□□□ -1.75
CCDC30-214ENST00000514642 A0A1B0GVY2 172 aa4.12□□□□□ -1.75
CCDC30-214ENST00000514642 BRCA2P51587 3418 aa4.12□□□□□ -1.75
CCDC30-214ENST00000514642 XP32Q5T750 250 aa4.11□□□□□ -1.75
CCDC30-214ENST00000514642 HTTP42858 3142 aa4.09□□□□□ -1.75
CCDC30-214ENST00000514642 Q5VV11 94 aa4.09□□□□□ -1.76
CCDC30-214ENST00000514642 CYSTM1Q9H1C7 97 aa4.08□□□□□ -1.76
CCDC30-214ENST00000514642 ZNF292O60281 2723 aa4.08□□□□□ -1.76
CCDC30-214ENST00000514642 SPATA8Q6RVD6 105 aa4.07□□□□□ -1.76
CCDC30-214ENST00000514642 IGSF10Q6WRI0 2623 aa4.07□□□□□ -1.76
CCDC30-214ENST00000514642 LAMA3Q16787 3333 aa4.07□□□□□ -1.76
CCDC30-214ENST00000514642 KRTAP10-10P60014 251 aa4.06□□□□□ -1.76
CCDC30-214ENST00000514642 PRUNE2Q8WUY3 3088 aa4.06□□□□□ -1.76
CCDC30-214ENST00000514642 TRANK1O15050 2925 aa4.06□□□□□ -1.76
CCDC30-214ENST00000514642 KRTAP1-4P0C5Y4 121 aa4.06□□□□□ -1.76
CCDC30-214ENST00000514642 AKAP13Q12802 2813 aa4.05□□□□□ -1.76
CCDC30-214ENST00000514642 CDH23Q9H251 3354 aa4.05□□□□□ -1.76
CCDC30-214ENST00000514642 PRO2289Q9P1D8 64 aa4.04□□□□□ -1.76
CCDC30-214ENST00000514642 RANBP2P49792 3224 aaKnown RBP4.04□□□□□ -1.76
CCDC30-214ENST00000514642 UNC79Q9P2D8 2635 aa4.04□□□□□ -1.76
CCDC30-214ENST00000514642 TNP1P09430 55 aa4.03□□□□□ -1.76
CCDC30-214ENST00000514642 CELSR3Q9NYQ7 3312 aa4.03□□□□□ -1.76
CCDC30-214ENST00000514642 SZT2Q5T011 3432 aa4.03□□□□□ -1.76
CCDC30-214ENST00000514642 PRRC2CQ9Y520 2896 aaKnown RBP4.01□□□□□ -1.77
CCDC30-214ENST00000514642 DNAH14Q0VDD8 3507 aa4□□□□□ -1.77
CCDC30-214ENST00000514642 KRTAP10-8P60410 259 aa3.99□□□□□ -1.77
CCDC30-214ENST00000514642 KRTAP13-3Q3SY46 172 aa3.99□□□□□ -1.77
CCDC30-214ENST00000514642 TEP1Q99973 2627 aaKnown RBP3.99□□□□□ -1.77
CCDC30-214ENST00000514642 ITPR2Q14571 2701 aa3.99□□□□□ -1.77
CCDC30-214ENST00000514642 TEX15Q9BXT5 2789 aa3.98□□□□□ -1.77
CCDC30-214ENST00000514642 SETXQ7Z333 2677 aaKnown RBP3.97□□□□□ -1.77
CCDC30-214ENST00000514642 A6NN06 94 aa3.97□□□□□ -1.77
CCDC30-214ENST00000514642 COL6A5A8TX70 2615 aa3.95□□□□□ -1.78
CCDC30-214ENST00000514642 CFAP54Q96N23 3096 aa3.95□□□□□ -1.78
CCDC30-214ENST00000514642 GCN1Q92616 2671 aaKnown RBP3.95□□□□□ -1.78
CCDC30-214ENST00000514642 USP34Q70CQ2 3546 aa3.94□□□□□ -1.78
CCDC30-214ENST00000514642 LAMA2P24043 3122 aaKnown RBP3.94□□□□□ -1.78
CCDC30-214ENST00000514642 UNC80Q8N2C7 3258 aa3.94□□□□□ -1.78
CCDC30-214ENST00000514642 VCANP13611 3396 aa3.94□□□□□ -1.78
CCDC30-214ENST00000514642 CRYBG3Q68DQ2 2970 aa3.93□□□□□ -1.78
CCDC30-214ENST00000514642 TRIOO75962 3097 aa3.93□□□□□ -1.78
CCDC30-214ENST00000514642 COL6A3P12111 3177 aa3.93□□□□□ -1.78
CCDC30-214ENST00000514642 STAB1Q9NY15 2570 aa3.92□□□□□ -1.78
CCDC30-214ENST00000514642 LCE2DQ5TA82 110 aaPredicted RBP3.91□□□□□ -1.78
CCDC30-214ENST00000514642 MGAQ8IWI9 3026 aa3.91□□□□□ -1.78
CCDC30-214ENST00000514642 TNRC18O15417 2968 aaPredicted RBP3.9□□□□□ -1.78
CCDC30-214ENST00000514642 KRTAP25-1Q3LHN0 102 aa3.89□□□□□ -1.79
CCDC30-214ENST00000514642 A8MU10 97 aa3.89□□□□□ -1.79
CCDC30-214ENST00000514642 SPTBN5Q9NRC6 3674 aaKnown RBP3.88□□□□□ -1.79
CCDC30-214ENST00000514642 A0A0C4DFX4 3053 aa3.88□□□□□ -1.79
CCDC30-214ENST00000514642 NDUFAF8A1L188 74 aa3.88□□□□□ -1.79
CCDC30-214ENST00000514642 WDFY4Q6ZS81 3184 aa3.86□□□□□ -1.79
CCDC30-214ENST00000514642 SPEGQ15772 3267 aa3.86□□□□□ -1.79
CCDC30-214ENST00000514642 NSD1Q96L73 2696 aaPredicted RBP3.84□□□□□ -1.79
CCDC30-214ENST00000514642 ZFHX3Q15911 3703 aa3.84□□□□□ -1.79
CCDC30-214ENST00000514642 CHD6Q8TD26 2715 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms