RNA–Protein interactions for RNA: ENST00000513997.1

DDX60-205, Transcript of DExD/H-box helicase 60, humanhuman

TSL 3

Gene DDX60, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-205ENST00000513997 SPTA1P02549 2419 aa1.93□□□□□ -2.1
DDX60-205ENST00000513997 PRH1P02810 166 aa1.93□□□□□ -2.1
DDX60-205ENST00000513997 SMR3AQ99954 134 aa1.93□□□□□ -2.1
DDX60-205ENST00000513997 ATRQ13535 2644 aa1.92□□□□□ -2.1
DDX60-205ENST00000513997 CHD6Q8TD26 2715 aa1.92□□□□□ -2.1
DDX60-205ENST00000513997 CDC42BPAQ5VT25 1732 aa1.91□□□□□ -2.1
DDX60-205ENST00000513997 FBN2P35556 2912 aa1.91□□□□□ -2.1
DDX60-205ENST00000513997 UNC79Q9P2D8 2635 aa1.91□□□□□ -2.1
DDX60-205ENST00000513997 ABCA2Q9BZC7 2435 aa1.9□□□□□ -2.1
DDX60-205ENST00000513997 CEP350Q5VT06 3117 aa1.9□□□□□ -2.11
DDX60-205ENST00000513997 VWFP04275 2813 aa1.9□□□□□ -2.11
DDX60-205ENST00000513997 TENM1Q9UKZ4 2725 aa1.89□□□□□ -2.11
DDX60-205ENST00000513997 ZNF469Q96JG9 3925 aaPredicted RBP1.88□□□□□ -2.11
DDX60-205ENST00000513997 CSPG4Q6UVK1 2322 aa1.87□□□□□ -2.11
DDX60-205ENST00000513997 TOMM5Q8N4H5 51 aa1.87□□□□□ -2.11
DDX60-205ENST00000513997 TMEM167BQ9NRX6 74 aa1.87□□□□□ -2.11
DDX60-205ENST00000513997 C6orf48Q9UBA6 75 aa1.87□□□□□ -2.11
DDX60-205ENST00000513997 NCOR1O75376 2440 aa1.86□□□□□ -2.11
DDX60-205ENST00000513997 TENM4Q6N022 2769 aa1.86□□□□□ -2.11
DDX60-205ENST00000513997 FBN3Q75N90 2809 aa1.85□□□□□ -2.11
DDX60-205ENST00000513997 SPINK1P00995 79 aa1.84□□□□□ -2.11
DDX60-205ENST00000513997 TRANK1O15050 2925 aa1.84□□□□□ -2.12
DDX60-205ENST00000513997 IQGAP2Q13576 1575 aa1.83□□□□□ -2.12
DDX60-205ENST00000513997 KIF21BO75037 1637 aa1.82□□□□□ -2.12
DDX60-205ENST00000513997 SMIM27A0A1W2PRY6 76 aa1.82□□□□□ -2.12
DDX60-205ENST00000513997 LINC00308Q8TCZ7 52 aa1.82□□□□□ -2.12
DDX60-205ENST00000513997 KRTAP4-1Q9BYQ7 146 aa1.82□□□□□ -2.12
DDX60-205ENST00000513997 IGF2RP11717 2491 aa1.82□□□□□ -2.12
DDX60-205ENST00000513997 DSPP15924 2871 aaKnown RBP1.82□□□□□ -2.12
DDX60-205ENST00000513997 RPS27P42677 84 aaKnown RBP1.81□□□□□ -2.12
DDX60-205ENST00000513997 RPS27LQ71UM5 84 aaKnown RBP1.81□□□□□ -2.12
DDX60-205ENST00000513997 ABRACLQ9P1F3 81 aa1.81□□□□□ -2.12
DDX60-205ENST00000513997 NOTCH1P46531 2555 aa1.81□□□□□ -2.12
DDX60-205ENST00000513997 LINC01546A6NGU7 62 aa1.79□□□□□ -2.12
DDX60-205ENST00000513997 CHD8Q9HCK8 2581 aa1.79□□□□□ -2.12
DDX60-205ENST00000513997 FCGBPQ9Y6R7 5405 aaPredicted RBP1.75□□□□□ -2.13
DDX60-205ENST00000513997 ZFYVE26Q68DK2 2539 aa1.74□□□□□ -2.13
DDX60-205ENST00000513997 DDX60Q8IY21 1712 aaKnown RBP1.73□□□□□ -2.13
DDX60-205ENST00000513997 A0A0C4DFX4 3053 aa1.72□□□□□ -2.13
DDX60-205ENST00000513997 IQGAP1P46940 1657 aa1.72□□□□□ -2.13
DDX60-205ENST00000513997 LMO7Q8WWI1 1683 aa1.72□□□□□ -2.13
DDX60-205ENST00000513997 U3KQA8 63 aa1.72□□□□□ -2.13
DDX60-205ENST00000513997 BSNQ9UPA5 3926 aa1.7□□□□□ -2.14
DDX60-205ENST00000513997 WT1-ASQ06250 92 aa1.7□□□□□ -2.14
DDX60-205ENST00000513997 FAM208AQ9UK61 1670 aaKnown RBP1.68□□□□□ -2.14
DDX60-205ENST00000513997 TRPM2O94759 1503 aa1.68□□□□□ -2.14
DDX60-205ENST00000513997 TIMM8BQ9Y5J9 83 aaPredicted RBP1.68□□□□□ -2.14
DDX60-205ENST00000513997 PCNX1Q96RV3 2341 aa1.68□□□□□ -2.14
DDX60-205ENST00000513997 FASNP49327 2511 aaKnown RBP1.68□□□□□ -2.14
DDX60-205ENST00000513997 NAV2Q8IVL1 2488 aa1.67□□□□□ -2.14
DDX60-205ENST00000513997 OTOGQ6ZRI0 2925 aa1.67□□□□□ -2.14
DDX60-205ENST00000513997 USP9XQ93008 2570 aaPredicted RBP1.67□□□□□ -2.14
DDX60-205ENST00000513997 FLNBO75369 2602 aaKnown RBP1.66□□□□□ -2.14
DDX60-205ENST00000513997 ANKRD11Q6UB99 2663 aaPredicted RBP1.66□□□□□ -2.14
DDX60-205ENST00000513997 PCNTO95613 3336 aa1.65□□□□□ -2.15
DDX60-205ENST00000513997 NFAT5O94916 1531 aa1.65□□□□□ -2.15
DDX60-205ENST00000513997 UTRNP46939 3433 aa1.65□□□□□ -2.15
DDX60-205ENST00000513997 MROH2BQ7Z745 1585 aa1.64□□□□□ -2.15
DDX60-205ENST00000513997 EP400Q96L91 3159 aa1.64□□□□□ -2.15
DDX60-205ENST00000513997 MAST4O15021 2626 aa1.64□□□□□ -2.15
DDX60-205ENST00000513997 TNRC18O15417 2968 aaPredicted RBP1.64□□□□□ -2.15
DDX60-205ENST00000513997 SETXQ7Z333 2677 aaKnown RBP1.63□□□□□ -2.15
DDX60-205ENST00000513997 PTPN13Q12923 2485 aa1.62□□□□□ -2.15
DDX60-205ENST00000513997 SNRPGP62308 76 aaKnown RBP1.62□□□□□ -2.15
DDX60-205ENST00000513997 S4R3F8 94 aa1.62□□□□□ -2.15
DDX60-205ENST00000513997 EPG5Q9HCE0 2579 aa1.61□□□□□ -2.15
DDX60-205ENST00000513997 CEP290O15078 2479 aa1.61□□□□□ -2.15
DDX60-205ENST00000513997 DOPEY1Q5JWR5 2465 aa1.61□□□□□ -2.15
DDX60-205ENST00000513997 FAT2Q9NYQ8 4349 aa1.59□□□□□ -2.15
DDX60-205ENST00000513997 M0R2T5 61 aa1.59□□□□□ -2.15
DDX60-205ENST00000513997 DEFB135Q30KP9 77 aa1.59□□□□□ -2.15
DDX60-205ENST00000513997 PRKDCP78527 4128 aaKnown RBP1.59□□□□□ -2.16
DDX60-205ENST00000513997 HECTD1Q9ULT8 2610 aa1.58□□□□□ -2.16
DDX60-205ENST00000513997 TEP1Q99973 2627 aaKnown RBP1.58□□□□□ -2.16
DDX60-205ENST00000513997 TNXBP22105 4242 aa1.58□□□□□ -2.16
DDX60-205ENST00000513997 EP300Q09472 2414 aaPredicted RBP1.57□□□□□ -2.16
DDX60-205ENST00000513997 COL6A3P12111 3177 aa1.57□□□□□ -2.16
DDX60-205ENST00000513997 SPTBN4Q9H254 2564 aa1.56□□□□□ -2.16
DDX60-205ENST00000513997 AKAP13Q12802 2813 aa1.56□□□□□ -2.16
DDX60-205ENST00000513997 ACACBO00763 2458 aa1.56□□□□□ -2.16
DDX60-205ENST00000513997 ITPR3Q14573 2671 aa1.55□□□□□ -2.16
DDX60-205ENST00000513997 TFF3Q07654 80 aa1.55□□□□□ -2.16
DDX60-205ENST00000513997 DEFB106AQ8N104 65 aa1.55□□□□□ -2.16
DDX60-205ENST00000513997 MYO18BQ8IUG5 2567 aa1.54□□□□□ -2.16
DDX60-205ENST00000513997 H3BUA1 57 aa1.54□□□□□ -2.16
DDX60-205ENST00000513997 GCN1Q92616 2671 aaKnown RBP1.54□□□□□ -2.16
DDX60-205ENST00000513997 ATP7AQ04656 1500 aa1.54□□□□□ -2.16
DDX60-205ENST00000513997 CEP250Q9BV73 2442 aa1.54□□□□□ -2.16
DDX60-205ENST00000513997 PKD1L1Q8TDX9 2849 aa1.53□□□□□ -2.16
DDX60-205ENST00000513997 PRRC2CQ9Y520 2896 aaKnown RBP1.53□□□□□ -2.16
DDX60-205ENST00000513997 GOLGB1Q14789 3259 aaKnown RBP1.53□□□□□ -2.16
DDX60-205ENST00000513997 PRLHP81277 87 aa1.53□□□□□ -2.16
DDX60-205ENST00000513997 SZT2Q5T011 3432 aa1.53□□□□□ -2.16
DDX60-205ENST00000513997 SAMD9LQ8IVG5 1584 aa1.52□□□□□ -2.17
DDX60-205ENST00000513997 SPTAN1Q13813 2472 aaKnown RBP1.52□□□□□ -2.17
DDX60-205ENST00000513997 USP24Q9UPU5 2620 aa1.51□□□□□ -2.17
DDX60-205ENST00000513997 UNC80Q8N2C7 3258 aa1.51□□□□□ -2.17
DDX60-205ENST00000513997 MAP1BP46821 2468 aaKnown RBP1.51□□□□□ -2.17
DDX60-205ENST00000513997 RIF1Q5UIP0 2472 aaKnown RBP1.5□□□□□ -2.17
DDX60-205ENST00000513997 LAMA2P24043 3122 aaKnown RBP1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms