RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 C3orf22Q8N5N4 141 aa5.8□□□□□ -1.48
TOPBP1-209ENST00000513818 PRO1854Q9UHT4 67 aa5.79□□□□□ -1.48
TOPBP1-209ENST00000513818 ZNF706Q9Y5V0 76 aaPredicted RBP5.79□□□□□ -1.48
TOPBP1-209ENST00000513818 TRBV7-6A0A0J9YX20 115 aa5.78□□□□□ -1.48
TOPBP1-209ENST00000513818 CRYGAP11844 174 aa5.78□□□□□ -1.48
TOPBP1-209ENST00000513818 DHRS4-AS1Q9P1J3 65 aa5.78□□□□□ -1.48
TOPBP1-209ENST00000513818 FAM229BQ4G0N7 80 aa5.77□□□□□ -1.49
TOPBP1-209ENST00000513818 DEFB105AQ8NG35 78 aa5.77□□□□□ -1.49
TOPBP1-209ENST00000513818 TYMSOSQ8TAI1 123 aa5.77□□□□□ -1.49
TOPBP1-209ENST00000513818 IGLV9-49A0A0B4J1Y8 123 aa5.76□□□□□ -1.49
TOPBP1-209ENST00000513818 TSPAN13O95857 204 aa5.76□□□□□ -1.49
TOPBP1-209ENST00000513818 BATFQ16520 125 aa5.76□□□□□ -1.49
TOPBP1-209ENST00000513818 LINC00483Q53H64 154 aa5.76□□□□□ -1.49
TOPBP1-209ENST00000513818 LINC00575Q6W349 94 aa5.76□□□□□ -1.49
TOPBP1-209ENST00000513818 FAM218AQ96MZ4 157 aa5.75□□□□□ -1.49
TOPBP1-209ENST00000513818 M0R143 59 aa5.74□□□□□ -1.49
TOPBP1-209ENST00000513818 LINC01547P58512 204 aaPredicted RBP5.74□□□□□ -1.49
TOPBP1-209ENST00000513818 MOBPQ13875 183 aa5.74□□□□□ -1.49
TOPBP1-209ENST00000513818 NAA38Q9BRA0 125 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-209ENST00000513818 SLC25A20O43772 301 aa5.73□□□□□ -1.49
TOPBP1-209ENST00000513818 PSMB2P49721 201 aa5.73□□□□□ -1.49
TOPBP1-209ENST00000513818 Q6ZQY7 126 aa5.73□□□□□ -1.49
TOPBP1-209ENST00000513818 CLEC2BQ92478 149 aa5.73□□□□□ -1.49
TOPBP1-209ENST00000513818 hADV29S1A0JD25 119 aa5.72□□□□□ -1.49
TOPBP1-209ENST00000513818 C9orf153Q5TBE3 101 aa5.72□□□□□ -1.49
TOPBP1-209ENST00000513818 IGLV5-48A0A075B6I7 105 aa5.71□□□□□ -1.5
TOPBP1-209ENST00000513818 SPRR1BP22528 89 aa5.71□□□□□ -1.5
TOPBP1-209ENST00000513818 Q8N377 158 aa5.71□□□□□ -1.5
TOPBP1-209ENST00000513818 Q8NBF4 154 aa5.71□□□□□ -1.5
TOPBP1-209ENST00000513818 TEX49A0A1B0GTD5 131 aa5.7□□□□□ -1.5
TOPBP1-209ENST00000513818 Q6ZVQ6 151 aa5.7□□□□□ -1.5
TOPBP1-209ENST00000513818 LINC00304Q8N9R0 145 aa5.7□□□□□ -1.5
TOPBP1-209ENST00000513818 H0YGX0 51 aa5.69□□□□□ -1.5
TOPBP1-209ENST00000513818 SMIM29Q86T20 159 aa5.69□□□□□ -1.5
TOPBP1-209ENST00000513818 A0A0G2JQZ4 141 aa5.68□□□□□ -1.5
TOPBP1-209ENST00000513818 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-209ENST00000513818 LAMTOR3Q9UHA4 124 aa5.68□□□□□ -1.5
TOPBP1-209ENST00000513818 LPAP08519 4548 aa5.68□□□□□ -1.5
TOPBP1-209ENST00000513818 SCGB1C2P0DMR2 95 aa5.66□□□□□ -1.5
TOPBP1-209ENST00000513818 LCE4AQ5TA78 99 aa5.66□□□□□ -1.5
TOPBP1-209ENST00000513818 RETNLBQ9BQ08 111 aa5.66□□□□□ -1.5
TOPBP1-209ENST00000513818 SNHG12Q9BXW3 62 aa5.66□□□□□ -1.5
TOPBP1-209ENST00000513818 COX6CP09669 75 aa5.65□□□□□ -1.5
TOPBP1-209ENST00000513818 C5orf47Q569G3 176 aa5.65□□□□□ -1.5
TOPBP1-209ENST00000513818 LCE1DQ5T752 114 aa5.65□□□□□ -1.5
TOPBP1-209ENST00000513818 HRCT1Q6UXD1 115 aa5.65□□□□□ -1.5
TOPBP1-209ENST00000513818 A0A1B0GV72 72 aa5.64□□□□□ -1.51
TOPBP1-209ENST00000513818 H3BUT2 72 aa5.64□□□□□ -1.51
TOPBP1-209ENST00000513818 LRP2P98164 4655 aa5.64□□□□□ -1.51
TOPBP1-209ENST00000513818 A0A1B0GX51 115 aa5.63□□□□□ -1.51
TOPBP1-209ENST00000513818 F8WEM9 126 aa5.63□□□□□ -1.51
TOPBP1-209ENST00000513818 LST1O00453 97 aa5.63□□□□□ -1.51
TOPBP1-209ENST00000513818 TAX1BP3O14907 124 aa5.63□□□□□ -1.51
TOPBP1-209ENST00000513818 DNAL4O96015 105 aa5.63□□□□□ -1.51
TOPBP1-209ENST00000513818 SSBP3-AS1Q7Z2R9 100 aa5.63□□□□□ -1.51
TOPBP1-209ENST00000513818 SNCGO76070 127 aa5.62□□□□□ -1.51
TOPBP1-209ENST00000513818 TCL1BO95988 128 aa5.62□□□□□ -1.51
TOPBP1-209ENST00000513818 FABP2P12104 132 aa5.62□□□□□ -1.51
TOPBP1-209ENST00000513818 SPAG11AQ6PDA7 123 aa5.61□□□□□ -1.51
TOPBP1-209ENST00000513818 MPLKIPQ8TAP9 179 aa5.61□□□□□ -1.51
TOPBP1-209ENST00000513818 TRACP01848 142 aa5.6□□□□□ -1.51
TOPBP1-209ENST00000513818 PRR4Q16378 134 aa5.6□□□□□ -1.51
TOPBP1-209ENST00000513818 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
TOPBP1-209ENST00000513818 PPDPFLQ8WWR9 84 aa5.6□□□□□ -1.51
TOPBP1-209ENST00000513818 ORMDL1Q9P0S3 153 aa5.6□□□□□ -1.51
TOPBP1-209ENST00000513818 NDUFV3P56181 108 aaKnown RBP5.59□□□□□ -1.51
TOPBP1-209ENST00000513818 OCIAD2Q56VL3 154 aa5.59□□□□□ -1.51
TOPBP1-209ENST00000513818 IGFL1Q6UW32 110 aa5.59□□□□□ -1.51
TOPBP1-209ENST00000513818 SPINK1P00995 79 aa5.58□□□□□ -1.52
TOPBP1-209ENST00000513818 ATXN8Q156A1 80 aa5.58□□□□□ -1.52
TOPBP1-209ENST00000513818 KRTAP4-7Q9BYR0 210 aa5.58□□□□□ -1.52
TOPBP1-209ENST00000513818 V9GYY9 64 aa5.58□□□□□ -1.52
TOPBP1-209ENST00000513818 UBR4Q5T4S7 5183 aa5.58□□□□□ -1.52
TOPBP1-209ENST00000513818 IGLV8-61A0A075B6I0 122 aa5.57□□□□□ -1.52
TOPBP1-209ENST00000513818 A0A1W2PPM0 123 aa5.57□□□□□ -1.52
TOPBP1-209ENST00000513818 LYRM7Q5U5X0 104 aa5.57□□□□□ -1.52
TOPBP1-209ENST00000513818 MTURNQ8N3F0 131 aa5.57□□□□□ -1.52
TOPBP1-209ENST00000513818 H3BMG7 143 aa5.56□□□□□ -1.52
TOPBP1-209ENST00000513818 COL5A1-AS1Q5SY13 56 aa5.56□□□□□ -1.52
TOPBP1-209ENST00000513818 Q6JHZ5 121 aa5.55□□□□□ -1.52
TOPBP1-209ENST00000513818 KRTAP9-7A8MTY7 169 aa5.54□□□□□ -1.52
TOPBP1-209ENST00000513818 C9JAW5 83 aa5.54□□□□□ -1.52
TOPBP1-209ENST00000513818 TMEM256-PLSCR3K7ERE1 68 aa5.54□□□□□ -1.52
TOPBP1-209ENST00000513818 BAALC-AS2P0C853 105 aa5.54□□□□□ -1.52
TOPBP1-209ENST00000513818 RPS29P62273 56 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-209ENST00000513818 CD164Q04900 197 aa5.53□□□□□ -1.52
TOPBP1-209ENST00000513818 ANKRD29Q8N6D5 301 aa5.53□□□□□ -1.52
TOPBP1-209ENST00000513818 LIMD2Q9BT23 127 aa5.53□□□□□ -1.52
TOPBP1-209ENST00000513818 SPCS1Q9Y6A9 102 aa5.53□□□□□ -1.52
TOPBP1-209ENST00000513818 TRBV20-1A0A075B6N2 111 aa5.52□□□□□ -1.53
TOPBP1-209ENST00000513818 TRBV7-7A0A0K0K1E9 115 aa5.52□□□□□ -1.53
TOPBP1-209ENST00000513818 IGLV7-46A0A075B6I9 117 aa5.51□□□□□ -1.53
TOPBP1-209ENST00000513818 MUC17Q685J3 4493 aa5.5□□□□□ -1.53
TOPBP1-209ENST00000513818 A0A1W2PNM2 257 aa5.5□□□□□ -1.53
TOPBP1-209ENST00000513818 H3BQ85 93 aa5.5□□□□□ -1.53
TOPBP1-209ENST00000513818 VPS25Q9BRG1 176 aa5.49□□□□□ -1.53
TOPBP1-209ENST00000513818 A0A087WSZ3 146 aa5.48□□□□□ -1.53
TOPBP1-209ENST00000513818 K7EP34 96 aa5.48□□□□□ -1.53
TOPBP1-209ENST00000513818 FP248Q71RG6 208 aaPredicted RBP5.48□□□□□ -1.53
TOPBP1-209ENST00000513818 KRTAP4-9Q9BYQ8 210 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms