RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 DMAC1Q96GE9 116 aa7.57□□□□□ -1.2
COL11A1-210ENST00000512756 AKAP13Q12802 2813 aa7.55□□□□□ -1.2
COL11A1-210ENST00000512756 STAB1Q9NY15 2570 aa7.55□□□□□ -1.2
COL11A1-210ENST00000512756 KRTAP1-5Q9BYS1 174 aa7.53□□□□□ -1.2
COL11A1-210ENST00000512756 CSAG1Q6PB30 78 aa7.53□□□□□ -1.2
COL11A1-210ENST00000512756 CAMK2N1Q7Z7J9 78 aa7.52□□□□□ -1.21
COL11A1-210ENST00000512756 CHD6Q8TD26 2715 aa7.51□□□□□ -1.21
COL11A1-210ENST00000512756 CHD9Q3L8U1 2897 aa7.51□□□□□ -1.21
COL11A1-210ENST00000512756 SPINK7P58062 85 aa7.49□□□□□ -1.21
COL11A1-210ENST00000512756 S4R3F8 94 aa7.49□□□□□ -1.21
COL11A1-210ENST00000512756 LINC00483Q53H64 154 aa7.49□□□□□ -1.21
COL11A1-210ENST00000512756 KRTAP4-16G5E9R7 235 aaPredicted RBP7.48□□□□□ -1.21
COL11A1-210ENST00000512756 C5orf42Q9H799 3197 aa7.46□□□□□ -1.22
COL11A1-210ENST00000512756 TNRC18O15417 2968 aaPredicted RBP7.45□□□□□ -1.22
COL11A1-210ENST00000512756 OXTP01178 125 aa7.45□□□□□ -1.22
COL11A1-210ENST00000512756 NBEAL1Q6ZS30 2694 aa7.44□□□□□ -1.22
COL11A1-210ENST00000512756 Q6ZR54 194 aa7.44□□□□□ -1.22
COL11A1-210ENST00000512756 PRAC1Q96KF2 57 aa7.44□□□□□ -1.22
COL11A1-210ENST00000512756 KRTAP29-1A8MX34 341 aaPredicted RBP7.42□□□□□ -1.22
COL11A1-210ENST00000512756 TEX15Q9BXT5 2789 aa7.42□□□□□ -1.22
COL11A1-210ENST00000512756 ZNF292O60281 2723 aa7.41□□□□□ -1.22
COL11A1-210ENST00000512756 UNC79Q9P2D8 2635 aa7.4□□□□□ -1.22
COL11A1-210ENST00000512756 GCN1Q92616 2671 aaKnown RBP7.39□□□□□ -1.23
COL11A1-210ENST00000512756 TEP1Q99973 2627 aaKnown RBP7.39□□□□□ -1.23
COL11A1-210ENST00000512756 KRTAP10-1P60331 282 aa7.37□□□□□ -1.23
COL11A1-210ENST00000512756 RPL37P61927 97 aaKnown RBP7.36□□□□□ -1.23
COL11A1-210ENST00000512756 R4GN34 69 aa7.36□□□□□ -1.23
COL11A1-210ENST00000512756 MGAQ8IWI9 3026 aa7.36□□□□□ -1.23
COL11A1-210ENST00000512756 TRANK1O15050 2925 aa7.35□□□□□ -1.23
COL11A1-210ENST00000512756 SEC61BP60468 96 aaKnown RBP7.35□□□□□ -1.23
COL11A1-210ENST00000512756 M0R2T5 61 aa7.35□□□□□ -1.23
COL11A1-210ENST00000512756 KRTAP10-2P60368 255 aa7.34□□□□□ -1.23
COL11A1-210ENST00000512756 FLG2Q5D862 2391 aaPredicted RBP7.34□□□□□ -1.23
COL11A1-210ENST00000512756 COL6A5A8TX70 2615 aa7.34□□□□□ -1.23
COL11A1-210ENST00000512756 CFAP54Q96N23 3096 aa7.33□□□□□ -1.24
COL11A1-210ENST00000512756 PCNTO95613 3336 aa7.33□□□□□ -1.24
COL11A1-210ENST00000512756 NOTCH1P46531 2555 aa7.33□□□□□ -1.24
COL11A1-210ENST00000512756 ASB16-AS1Q495Z4 193 aa7.33□□□□□ -1.24
COL11A1-210ENST00000512756 H1FX-AS1Q4G0G2 97 aa7.32□□□□□ -1.24
COL11A1-210ENST00000512756 PANO1I0J062 215 aa7.32□□□□□ -1.24
COL11A1-210ENST00000512756 ROMO1P60602 79 aa7.31□□□□□ -1.24
COL11A1-210ENST00000512756 LCE6AA0A183 80 aa7.3□□□□□ -1.24
COL11A1-210ENST00000512756 Q5VSD8 79 aa7.3□□□□□ -1.24
COL11A1-210ENST00000512756 BRCA2P51587 3418 aa7.28□□□□□ -1.24
COL11A1-210ENST00000512756 A0A0C4DFX4 3053 aa7.26□□□□□ -1.25
COL11A1-210ENST00000512756 RANBP2P49792 3224 aaKnown RBP7.25□□□□□ -1.25
COL11A1-210ENST00000512756 DMBT1Q9UGM3 2413 aaPredicted RBP7.24□□□□□ -1.25
COL11A1-210ENST00000512756 A0A087X002 238 aa7.24□□□□□ -1.25
COL11A1-210ENST00000512756 A0A0A0MQY5 61 aa7.23□□□□□ -1.25
COL11A1-210ENST00000512756 SETXQ7Z333 2677 aaKnown RBP7.23□□□□□ -1.25
COL11A1-210ENST00000512756 NBEAL2Q6ZNJ1 2754 aa7.23□□□□□ -1.25
COL11A1-210ENST00000512756 H3BS24 57 aa7.22□□□□□ -1.25
COL11A1-210ENST00000512756 SPATA8Q6RVD6 105 aa7.22□□□□□ -1.25
COL11A1-210ENST00000512756 M0QZ58 72 aa7.21□□□□□ -1.26
COL11A1-210ENST00000512756 NOTCH2NLQ7Z3S9 236 aa7.2□□□□□ -1.26
COL11A1-210ENST00000512756 RPS29P62273 56 aaKnown RBP7.2□□□□□ -1.26
COL11A1-210ENST00000512756 MKI67P46013 3256 aaKnown RBP7.2□□□□□ -1.26
COL11A1-210ENST00000512756 UBR5O95071 2799 aaPredicted RBP7.17□□□□□ -1.26
COL11A1-210ENST00000512756 KRTAP11-1Q8IUC1 163 aa7.17□□□□□ -1.26
COL11A1-210ENST00000512756 IGSF10Q6WRI0 2623 aa7.17□□□□□ -1.26
COL11A1-210ENST00000512756 Q6ZRN7 208 aaPredicted RBP7.17□□□□□ -1.26
COL11A1-210ENST00000512756 USP34Q70CQ2 3546 aa7.17□□□□□ -1.26
COL11A1-210ENST00000512756 KRTAP7-1Q8IUC3 87 aa7.16□□□□□ -1.26
COL11A1-210ENST00000512756 ADM2Q7Z4H4 148 aa7.15□□□□□ -1.27
COL11A1-210ENST00000512756 STAB2Q8WWQ8 2551 aa7.14□□□□□ -1.27
COL11A1-210ENST00000512756 DSPP15924 2871 aaKnown RBP7.14□□□□□ -1.27
COL11A1-210ENST00000512756 WDFY4Q6ZS81 3184 aa7.13□□□□□ -1.27
COL11A1-210ENST00000512756 NSD1Q96L73 2696 aaPredicted RBP7.13□□□□□ -1.27
COL11A1-210ENST00000512756 MAP1AP78559 2803 aaPredicted RBP7.12□□□□□ -1.27
COL11A1-210ENST00000512756 KRTAP13-1Q8IUC0 172 aa7.12□□□□□ -1.27
COL11A1-210ENST00000512756 LAMA3Q16787 3333 aa7.1□□□□□ -1.27
COL11A1-210ENST00000512756 LAMA2P24043 3122 aaKnown RBP7.09□□□□□ -1.27
COL11A1-210ENST00000512756 A6NN06 94 aa7.09□□□□□ -1.28
COL11A1-210ENST00000512756 REV3LO60673 3130 aa7.06□□□□□ -1.28
COL11A1-210ENST00000512756 FRYQ5TBA9 3013 aa7.05□□□□□ -1.28
COL11A1-210ENST00000512756 KRTAP13-2Q52LG2 175 aa7.04□□□□□ -1.28
COL11A1-210ENST00000512756 ITPR2Q14571 2701 aa7.04□□□□□ -1.28
COL11A1-210ENST00000512756 PLAC4Q8WY50 150 aa7.03□□□□□ -1.28
COL11A1-210ENST00000512756 KRTAP25-1Q3LHN0 102 aa7.01□□□□□ -1.29
COL11A1-210ENST00000512756 ITPR1Q14643 2758 aa7.01□□□□□ -1.29
COL11A1-210ENST00000512756 TRIOO75962 3097 aa7.01□□□□□ -1.29
COL11A1-210ENST00000512756 BAHCC1Q9P281 2608 aa6.98□□□□□ -1.29
COL11A1-210ENST00000512756 PRUNE2Q8WUY3 3088 aa6.97□□□□□ -1.29
COL11A1-210ENST00000512756 SPTBN5Q9NRC6 3674 aaKnown RBP6.97□□□□□ -1.29
COL11A1-210ENST00000512756 A8MU10 97 aa6.97□□□□□ -1.29
COL11A1-210ENST00000512756 VPS13AQ96RL7 3174 aa6.96□□□□□ -1.3
COL11A1-210ENST00000512756 CDH23Q9H251 3354 aa6.95□□□□□ -1.3
COL11A1-210ENST00000512756 KMT2BQ9UMN6 2715 aaPredicted RBP6.95□□□□□ -1.3
COL11A1-210ENST00000512756 A8MUU9 505 aa6.95□□□□□ -1.3
COL11A1-210ENST00000512756 FLNCQ14315 2725 aa6.9□□□□□ -1.3
COL11A1-210ENST00000512756 KALRNO60229 2985 aa6.88□□□□□ -1.31
COL11A1-210ENST00000512756 SZT2Q5T011 3432 aa6.88□□□□□ -1.31
COL11A1-210ENST00000512756 C20orf166-AS1Q96NR2 134 aa6.86□□□□□ -1.31
COL11A1-210ENST00000512756 APCP25054 2843 aa6.86□□□□□ -1.31
COL11A1-210ENST00000512756 UTP20O75691 2785 aaKnown RBP6.85□□□□□ -1.31
COL11A1-210ENST00000512756 UNC80Q8N2C7 3258 aa6.84□□□□□ -1.31
COL11A1-210ENST00000512756 KRTAP16-1A8MUX0 517 aa6.84□□□□□ -1.31
COL11A1-210ENST00000512756 TACC2O95359 2948 aa6.83□□□□□ -1.32
COL11A1-210ENST00000512756 XIRP2A4UGR9 3374 aa6.83□□□□□ -1.32
COL11A1-210ENST00000512756 NIPBLQ6KC79 2804 aaeCLIP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms