RNA–Protein interactions for RNA: ENST00000512620.5

CAST-238, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-238	ENST00000512620	IGLV7-43	P04211	117 aa		2.08	□□□□□ -2.08
CAST-238	ENST00000512620	LINC01554	Q52M75	96 aa		2.08	□□□□□ -2.08
CAST-238	ENST00000512620	KRTAP26-1	Q6PEX3	210 aa		2.08	□□□□□ -2.08
CAST-238	ENST00000512620		Q6ZRX8	168 aa		2.08	□□□□□ -2.08
CAST-238	ENST00000512620	SPTSSB	Q8NFR3	76 aa		2.08	□□□□□ -2.08
CAST-238	ENST00000512620	LINC00208	Q96KT6	92 aa		2.08	□□□□□ -2.08
CAST-238	ENST00000512620	PRR15L	Q9BU68	103 aa		2.08	□□□□□ -2.08
CAST-238	ENST00000512620	CSPG4	Q6UVK1	2322 aa		2.08	□□□□□ -2.08
CAST-238	ENST00000512620	DMD	P11532	3685 aa		2.07	□□□□□ -2.08
CAST-238	ENST00000512620	SMG1	Q96Q15	3661 aa	Known RBP	2.07	□□□□□ -2.08
CAST-238	ENST00000512620	SPEN	Q96T58	3664 aa	Known RBP	2.07	□□□□□ -2.08
CAST-238	ENST00000512620		H0Y9P7	68 aa		2.07	□□□□□ -2.08
CAST-238	ENST00000512620	DEFB4A	O15263	64 aa		2.07	□□□□□ -2.08
CAST-238	ENST00000512620	SPART-AS1	P0CW21	52 aa		2.07	□□□□□ -2.08
CAST-238	ENST00000512620	HTN3	P15516	51 aa		2.07	□□□□□ -2.08
CAST-238	ENST00000512620	SPRR1A	P35321	89 aa		2.07	□□□□□ -2.08
CAST-238	ENST00000512620	LINC00313	P59037	77 aa		2.07	□□□□□ -2.08
CAST-238	ENST00000512620	MOBP	Q13875	183 aa		2.07	□□□□□ -2.08
CAST-238	ENST00000512620	DEFB113	Q30KQ7	82 aa		2.07	□□□□□ -2.08
CAST-238	ENST00000512620	LCE3A	Q5TA76	89 aa		2.07	□□□□□ -2.08
CAST-238	ENST00000512620	PLAC8	Q9NZF1	115 aa		2.07	□□□□□ -2.08
CAST-238	ENST00000512620	LINC01558	Q9Y6Z2	57 aa		2.07	□□□□□ -2.08
CAST-238	ENST00000512620	ATM	Q13315	3056 aa		2.07	□□□□□ -2.08
CAST-238	ENST00000512620	WNK1	Q9H4A3	2382 aa		2.07	□□□□□ -2.08
CAST-238	ENST00000512620	CELSR1	Q9NYQ6	3014 aa		2.07	□□□□□ -2.08
CAST-238	ENST00000512620	TLN1	Q9Y490	2541 aa	Known RBP	2.07	□□□□□ -2.08
CAST-238	ENST00000512620	BDP1	A6H8Y1	2624 aa		2.06	□□□□□ -2.08
CAST-238	ENST00000512620		A6NED7	52 aa		2.06	□□□□□ -2.08
CAST-238	ENST00000512620	KRTAP5-8	O75690	187 aa		2.06	□□□□□ -2.08
CAST-238	ENST00000512620	PRB2	P02812	416 aa	Predicted RBP	2.06	□□□□□ -2.08
CAST-238	ENST00000512620	CNBP	P62633	177 aa	Known RBP	2.06	□□□□□ -2.08
CAST-238	ENST00000512620	DEFB135	Q30KP9	77 aa		2.06	□□□□□ -2.08
CAST-238	ENST00000512620	SPINT4	Q6UDR6	99 aa		2.06	□□□□□ -2.08
CAST-238	ENST00000512620	WFDC13	Q8IUB5	93 aa		2.06	□□□□□ -2.08
CAST-238	ENST00000512620	C9orf163	Q8N9P6	203 aa		2.06	□□□□□ -2.08
CAST-238	ENST00000512620		Q8NAQ8	132 aa		2.06	□□□□□ -2.08
CAST-238	ENST00000512620	ZNF292	O60281	2723 aa		2.05	□□□□□ -2.08
CAST-238	ENST00000512620		H3BNG1	76 aa		2.05	□□□□□ -2.08
CAST-238	ENST00000512620	IGFL1	Q6UW32	110 aa		2.05	□□□□□ -2.08
CAST-238	ENST00000512620	CASC2	Q6XLA1	102 aa		2.05	□□□□□ -2.08
CAST-238	ENST00000512620	WFDC10B	Q8IUB3	73 aa		2.05	□□□□□ -2.08
CAST-238	ENST00000512620	ZFHX4	Q86UP3	3567 aa		2.04	□□□□□ -2.08
CAST-238	ENST00000512620	COA5	Q86WW8	74 aa		2.04	□□□□□ -2.08
CAST-238	ENST00000512620		A0A0G2JQZ4	141 aa		2.03	□□□□□ -2.08
CAST-238	ENST00000512620		A0A1W2PNN7	141 aa		2.03	□□□□□ -2.08
CAST-238	ENST00000512620		A8MWP4	228 aa		2.03	□□□□□ -2.08
CAST-238	ENST00000512620	RPL37A	P61513	92 aa	Known RBP	2.03	□□□□□ -2.08
CAST-238	ENST00000512620	KRTAP13-3	Q3SY46	172 aa		2.03	□□□□□ -2.08
CAST-238	ENST00000512620	C2CD3	Q4AC94	2353 aa		2.03	□□□□□ -2.08
CAST-238	ENST00000512620	BSN	Q9UPA5	3926 aa		2.03	□□□□□ -2.08
CAST-238	ENST00000512620	MAP1A	P78559	2803 aa	Predicted RBP	2.03	□□□□□ -2.09
CAST-238	ENST00000512620	CEP295	Q9C0D2	2601 aa		2.03	□□□□□ -2.09
CAST-238	ENST00000512620	CRYBG3	Q68DQ2	2970 aa		2.02	□□□□□ -2.09
CAST-238	ENST00000512620		A0A087WSZ3	146 aa		2.02	□□□□□ -2.09
CAST-238	ENST00000512620		A8MUU9	505 aa		2.02	□□□□□ -2.09
CAST-238	ENST00000512620	LINC01556	Q5JQF7	62 aa		2.02	□□□□□ -2.09
CAST-238	ENST00000512620	NCOR2	Q9Y618	2525 aa		2.02	□□□□□ -2.09
CAST-238	ENST00000512620	PTPN13	Q12923	2485 aa		2.02	□□□□□ -2.09
CAST-238	ENST00000512620	GVINP1	Q7Z2Y8	2422 aa		2.02	□□□□□ -2.09
CAST-238	ENST00000512620	ASH1L	Q9NR48	2969 aa	Known RBP	2.02	□□□□□ -2.09
CAST-238	ENST00000512620	NBAS	A2RRP1	2371 aa		2.02	□□□□□ -2.09
CAST-238	ENST00000512620	ANKRD17	O75179	2603 aa	Known RBP	2.02	□□□□□ -2.09
CAST-238	ENST00000512620	SPG11	Q96JI7	2443 aa		2.01	□□□□□ -2.09
CAST-238	ENST00000512620	COL12A1	Q99715	3063 aa		2.01	□□□□□ -2.09
CAST-238	ENST00000512620	MMP24-AS1	A0A0U1RRL7	71 aa		2.01	□□□□□ -2.09
CAST-238	ENST00000512620	LINC00472	Q9H8W2	130 aa		2.01	□□□□□ -2.09
CAST-238	ENST00000512620	SETX	Q7Z333	2677 aa	Known RBP	2.01	□□□□□ -2.09
CAST-238	ENST00000512620	CHD6	Q8TD26	2715 aa		2	□□□□□ -2.09
CAST-238	ENST00000512620	RTL8C	O15255	209 aa		2	□□□□□ -2.09
CAST-238	ENST00000512620	SPRR1B	P22528	89 aa		2	□□□□□ -2.09
CAST-238	ENST00000512620	SPINK7	P58062	85 aa		2	□□□□□ -2.09
CAST-238	ENST00000512620	SPAG11A	Q6PDA7	123 aa		2	□□□□□ -2.09
CAST-238	ENST00000512620	RETNLB	Q9BQ08	111 aa		2	□□□□□ -2.09
CAST-238	ENST00000512620	TP53AIP1	Q9HCN2	124 aa		2	□□□□□ -2.09
CAST-238	ENST00000512620	NOTCH2	Q04721	2471 aa		2	□□□□□ -2.09
CAST-238	ENST00000512620	RIF1	Q5UIP0	2472 aa	Known RBP	2	□□□□□ -2.09
CAST-238	ENST00000512620	CREBBP	Q92793	2442 aa		2	□□□□□ -2.09
CAST-238	ENST00000512620	ASPM	Q8IZT6	3477 aa		2	□□□□□ -2.09
CAST-238	ENST00000512620	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	2	□□□□□ -2.09
CAST-238	ENST00000512620	HRES1	P13985	223 aa		1.99	□□□□□ -2.09
CAST-238	ENST00000512620	KRTAP10-8	P60410	259 aa		1.99	□□□□□ -2.09
CAST-238	ENST00000512620	PRLH	P81277	87 aa		1.99	□□□□□ -2.09
CAST-238	ENST00000512620	PCOTH	Q58A44	107 aa		1.99	□□□□□ -2.09
CAST-238	ENST00000512620	SPATA8	Q6RVD6	105 aa		1.99	□□□□□ -2.09
CAST-238	ENST00000512620	CELSR2	Q9HCU4	2923 aa		1.99	□□□□□ -2.09
CAST-238	ENST00000512620	DEFB131B	A0A096LNP1	70 aa		1.98	□□□□□ -2.09
CAST-238	ENST00000512620	TLN2	Q9Y4G6	2542 aa		1.98	□□□□□ -2.09
CAST-238	ENST00000512620	MXRA5	Q9NR99	2828 aa		1.98	□□□□□ -2.09
CAST-238	ENST00000512620	ITPR1	Q14643	2758 aa		1.98	□□□□□ -2.09
CAST-238	ENST00000512620	ZFHX3	Q15911	3703 aa		1.97	□□□□□ -2.09
CAST-238	ENST00000512620	IGKV2-24	A0A0C4DH68	120 aa		1.97	□□□□□ -2.09
CAST-238	ENST00000512620	RELN	P78509	3460 aa		1.97	□□□□□ -2.09
CAST-238	ENST00000512620	FN1	P02751	2386 aa	Known RBP	1.96	□□□□□ -2.09
CAST-238	ENST00000512620	APC	P25054	2843 aa		1.96	□□□□□ -2.1
CAST-238	ENST00000512620	IGF2R	P11717	2491 aa		1.96	□□□□□ -2.1
CAST-238	ENST00000512620	TEX15	Q9BXT5	2789 aa		1.96	□□□□□ -2.1
CAST-238	ENST00000512620	MUC6	Q6W4X9	2439 aa		1.96	□□□□□ -2.1
CAST-238	ENST00000512620		A0A096LNI7	61 aa		1.96	□□□□□ -2.1
CAST-238	ENST00000512620		Q96NJ1	140 aa		1.96	□□□□□ -2.1
CAST-238	ENST00000512620	DOPEY1	Q5JWR5	2465 aa		1.96	□□□□□ -2.1

Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms