RNA–Protein interactions for RNA: ENST00000512064.5

GYPA-208, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 441 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-208ENST00000512064 CACNA1EQ15878 2313 aa2.04□□□□□ -2.08
GYPA-208ENST00000512064 Q5VSD8 79 aa2.04□□□□□ -2.08
GYPA-208ENST00000512064 C10orf95Q9H7T3 257 aa2.04□□□□□ -2.08
GYPA-208ENST00000512064 KRTAP1-4P0C5Y4 121 aa2.03□□□□□ -2.08
GYPA-208ENST00000512064 RPS29P62273 56 aaKnown RBP2.03□□□□□ -2.08
GYPA-208ENST00000512064 ANKRD17O75179 2603 aaKnown RBP2.02□□□□□ -2.09
GYPA-208ENST00000512064 ALMS1Q8TCU4 4167 aa2.01□□□□□ -2.09
GYPA-208ENST00000512064 ATRXP46100 2492 aa2□□□□□ -2.09
GYPA-208ENST00000512064 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.99□□□□□ -2.09
GYPA-208ENST00000512064 A0A0D9SG42 100 aa1.99□□□□□ -2.09
GYPA-208ENST00000512064 SPRR5A0A1B0GTR4 108 aa1.99□□□□□ -2.09
GYPA-208ENST00000512064 DEFB135Q30KP9 77 aa1.99□□□□□ -2.09
GYPA-208ENST00000512064 AKAP6Q13023 2319 aa1.97□□□□□ -2.09
GYPA-208ENST00000512064 MAP1BP46821 2468 aaKnown RBP1.97□□□□□ -2.09
GYPA-208ENST00000512064 NOTCH2Q04721 2471 aa1.97□□□□□ -2.09
GYPA-208ENST00000512064 COL6A6A6NMZ7 2263 aa1.97□□□□□ -2.09
GYPA-208ENST00000512064 KRTAP12-1P59990 96 aa1.96□□□□□ -2.1
GYPA-208ENST00000512064 SPTBN2O15020 2390 aa1.96□□□□□ -2.1
GYPA-208ENST00000512064 LCE3CQ5T5A8 94 aa1.95□□□□□ -2.1
GYPA-208ENST00000512064 CACNA1HO95180 2353 aa1.95□□□□□ -2.1
GYPA-208ENST00000512064 CEP350Q5VT06 3117 aa1.95□□□□□ -2.1
GYPA-208ENST00000512064 ZFHX2Q9C0A1 2572 aaPredicted RBP1.95□□□□□ -2.1
GYPA-208ENST00000512064 TNRC18O15417 2968 aaPredicted RBP1.94□□□□□ -2.1
GYPA-208ENST00000512064 ACACAQ13085 2346 aa1.94□□□□□ -2.1
GYPA-208ENST00000512064 A0A1B0GVY2 172 aa1.94□□□□□ -2.1
GYPA-208ENST00000512064 KRTAP13-4Q3LI77 160 aa1.93□□□□□ -2.1
GYPA-208ENST00000512064 CEP250Q9BV73 2442 aa1.93□□□□□ -2.1
GYPA-208ENST00000512064 FAM186AA6NE01 2351 aa1.93□□□□□ -2.1
GYPA-208ENST00000512064 PCNX1Q96RV3 2341 aa1.92□□□□□ -2.1
GYPA-208ENST00000512064 KRTAP10-3P60369 221 aa1.92□□□□□ -2.1
GYPA-208ENST00000512064 PKDREJQ9NTG1 2253 aa1.92□□□□□ -2.1
GYPA-208ENST00000512064 SPTA1P02549 2419 aa1.91□□□□□ -2.1
GYPA-208ENST00000512064 DEFB4AO15263 64 aa1.91□□□□□ -2.1
GYPA-208ENST00000512064 APC2O95996 2303 aa1.91□□□□□ -2.1
GYPA-208ENST00000512064 MGAQ8IWI9 3026 aa1.9□□□□□ -2.11
GYPA-208ENST00000512064 FLG2Q5D862 2391 aaPredicted RBP1.9□□□□□ -2.11
GYPA-208ENST00000512064 ZDBF2Q9HCK1 2354 aa1.9□□□□□ -2.11
GYPA-208ENST00000512064 ZZEF1O43149 2961 aa1.89□□□□□ -2.11
GYPA-208ENST00000512064 PTPRZ1P23471 2315 aaPredicted RBP1.89□□□□□ -2.11
GYPA-208ENST00000512064 C9orf92A6NGG3 77 aa1.88□□□□□ -2.11
GYPA-208ENST00000512064 TNP1P09430 55 aa1.88□□□□□ -2.11
GYPA-208ENST00000512064 KRTAP10-8P60410 259 aa1.88□□□□□ -2.11
GYPA-208ENST00000512064 EP300Q09472 2414 aaPredicted RBP1.88□□□□□ -2.11
GYPA-208ENST00000512064 HIVEP2P31629 2446 aa1.87□□□□□ -2.11
GYPA-208ENST00000512064 TENM2Q9NT68 2774 aa1.87□□□□□ -2.11
GYPA-208ENST00000512064 KRTAP5-8O75690 187 aa1.86□□□□□ -2.11
GYPA-208ENST00000512064 KRTAP13-2Q52LG2 175 aa1.86□□□□□ -2.11
GYPA-208ENST00000512064 IGF2RP11717 2491 aa1.85□□□□□ -2.11
GYPA-208ENST00000512064 CHD7Q9P2D1 2997 aa1.85□□□□□ -2.11
GYPA-208ENST00000512064 COL6A3P12111 3177 aa1.84□□□□□ -2.11
GYPA-208ENST00000512064 ANKHD1Q8IWZ3 2542 aaKnown RBP1.84□□□□□ -2.12
GYPA-208ENST00000512064 SRCAPQ6ZRS2 3230 aa1.83□□□□□ -2.12
GYPA-208ENST00000512064 SPTBN4Q9H254 2564 aa1.83□□□□□ -2.12
GYPA-208ENST00000512064 GPR179Q6PRD1 2367 aa1.83□□□□□ -2.12
GYPA-208ENST00000512064 FAM208BQ5VWN6 2430 aa1.82□□□□□ -2.12
GYPA-208ENST00000512064 LCE3AQ5TA76 89 aa1.82□□□□□ -2.12
GYPA-208ENST00000512064 CSPG4Q6UVK1 2322 aa1.82□□□□□ -2.12
GYPA-208ENST00000512064 C2CD3Q4AC94 2353 aa1.81□□□□□ -2.12
GYPA-208ENST00000512064 CREBBPQ92793 2442 aa1.81□□□□□ -2.12
GYPA-208ENST00000512064 ROS1P08922 2347 aa1.81□□□□□ -2.12
GYPA-208ENST00000512064 OTOGLQ3ZCN5 2332 aa1.8□□□□□ -2.12
GYPA-208ENST00000512064 NCOR1O75376 2440 aa1.8□□□□□ -2.12
GYPA-208ENST00000512064 FN1P02751 2386 aaKnown RBP1.8□□□□□ -2.12
GYPA-208ENST00000512064 MAP1AP78559 2803 aaPredicted RBP1.8□□□□□ -2.12
GYPA-208ENST00000512064 PIEZO2Q9H5I5 2752 aa1.79□□□□□ -2.12
GYPA-208ENST00000512064 LCE3EQ5T5B0 92 aa1.79□□□□□ -2.12
GYPA-208ENST00000512064 CHD6Q8TD26 2715 aa1.79□□□□□ -2.12
GYPA-208ENST00000512064 RP1L1Q8IWN7 2480 aaPredicted RBP1.78□□□□□ -2.12
GYPA-208ENST00000512064 PCNTO95613 3336 aa1.77□□□□□ -2.13
GYPA-208ENST00000512064 CELSR2Q9HCU4 2923 aa1.77□□□□□ -2.13
GYPA-208ENST00000512064 NBEAQ8NFP9 2946 aa1.76□□□□□ -2.13
GYPA-208ENST00000512064 F8P00451 2351 aa1.76□□□□□ -2.13
GYPA-208ENST00000512064 ZNF462Q96JM2 2506 aa1.75□□□□□ -2.13
GYPA-208ENST00000512064 NBASA2RRP1 2371 aa1.75□□□□□ -2.13
GYPA-208ENST00000512064 ASH1LQ9NR48 2969 aaKnown RBP1.75□□□□□ -2.13
GYPA-208ENST00000512064 AKAP13Q12802 2813 aa1.75□□□□□ -2.13
GYPA-208ENST00000512064 RANBP2P49792 3224 aaKnown RBP1.74□□□□□ -2.13
GYPA-208ENST00000512064 PRUNE2Q8WUY3 3088 aa1.73□□□□□ -2.13
GYPA-208ENST00000512064 UBR5O95071 2799 aaPredicted RBP1.73□□□□□ -2.13
GYPA-208ENST00000512064 VPS13AQ96RL7 3174 aa1.73□□□□□ -2.13
GYPA-208ENST00000512064 OTOGQ6ZRI0 2925 aa1.73□□□□□ -2.13
GYPA-208ENST00000512064 GVINP1Q7Z2Y8 2422 aa1.73□□□□□ -2.13
GYPA-208ENST00000512064 ITPR1Q14643 2758 aa1.73□□□□□ -2.13
GYPA-208ENST00000512064 SPG11Q96JI7 2443 aa1.72□□□□□ -2.13
GYPA-208ENST00000512064 CENPFP49454 3210 aa1.72□□□□□ -2.13
GYPA-208ENST00000512064 KALRNO60229 2985 aa1.72□□□□□ -2.13
GYPA-208ENST00000512064 GOLGB1Q14789 3259 aaKnown RBP1.72□□□□□ -2.13
GYPA-208ENST00000512064 FRYLO94915 3013 aa1.72□□□□□ -2.13
GYPA-208ENST00000512064 NCOR2Q9Y618 2525 aa1.72□□□□□ -2.13
GYPA-208ENST00000512064 CFAP54Q96N23 3096 aa1.72□□□□□ -2.13
GYPA-208ENST00000512064 NAV2Q8IVL1 2488 aa1.7□□□□□ -2.14
GYPA-208ENST00000512064 WDFY4Q6ZS81 3184 aa1.7□□□□□ -2.14
GYPA-208ENST00000512064 PRRC2CQ9Y520 2896 aaKnown RBP1.7□□□□□ -2.14
GYPA-208ENST00000512064 UTRNP46939 3433 aa1.7□□□□□ -2.14
GYPA-208ENST00000512064 COL6A5A8TX70 2615 aa1.7□□□□□ -2.14
GYPA-208ENST00000512064 SPTAN1Q13813 2472 aaKnown RBP1.69□□□□□ -2.14
GYPA-208ENST00000512064 SMR3AQ99954 134 aa1.69□□□□□ -2.14
GYPA-208ENST00000512064 ABCA2Q9BZC7 2435 aa1.69□□□□□ -2.14
GYPA-208ENST00000512064 DSPP15924 2871 aaKnown RBP1.69□□□□□ -2.14
GYPA-208ENST00000512064 DNAH12Q6ZR08 3092 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms