RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 H3BUT2 72 aa11.57□□□□□ -0.56
SMAD1-211ENST00000512019 DNAL4O96015 105 aa11.57□□□□□ -0.56
SMAD1-211ENST00000512019 LINC01547P58512 204 aaPredicted RBP11.56□□□□□ -0.56
SMAD1-211ENST00000512019 OCIAD2Q56VL3 154 aa11.56□□□□□ -0.56
SMAD1-211ENST00000512019 LST1O00453 97 aa11.55□□□□□ -0.56
SMAD1-211ENST00000512019 GHRHP01286 108 aa11.55□□□□□ -0.56
SMAD1-211ENST00000512019 PPDPFLQ8WWR9 84 aa11.55□□□□□ -0.56
SMAD1-211ENST00000512019 TRACP01848 142 aa11.54□□□□□ -0.56
SMAD1-211ENST00000512019 TYMSOSQ8TAI1 123 aa11.54□□□□□ -0.56
SMAD1-211ENST00000512019 LAMTOR3Q9UHA4 124 aa11.54□□□□□ -0.56
SMAD1-211ENST00000512019 KRTAP13-2Q52LG2 175 aa11.53□□□□□ -0.56
SMAD1-211ENST00000512019 Q8N377 158 aa11.53□□□□□ -0.56
SMAD1-211ENST00000512019 ATXN8Q156A1 80 aa11.52□□□□□ -0.57
SMAD1-211ENST00000512019 IGLV9-49A0A0B4J1Y8 123 aa11.51□□□□□ -0.57
SMAD1-211ENST00000512019 C3orf22Q8N5N4 141 aa11.51□□□□□ -0.57
SMAD1-211ENST00000512019 TRBV20-1A0A075B6N2 111 aa11.5□□□□□ -0.57
SMAD1-211ENST00000512019 A0A1W2PPM0 123 aa11.5□□□□□ -0.57
SMAD1-211ENST00000512019 H3BQ85 93 aa11.49□□□□□ -0.57
SMAD1-211ENST00000512019 TCL1BO95988 128 aa11.49□□□□□ -0.57
SMAD1-211ENST00000512019 FABP2P12104 132 aa11.49□□□□□ -0.57
SMAD1-211ENST00000512019 C9orf153Q5TBE3 101 aa11.49□□□□□ -0.57
SMAD1-211ENST00000512019 ORMDL1Q9P0S3 153 aa11.49□□□□□ -0.57
SMAD1-211ENST00000512019 MOBPQ13875 183 aa11.48□□□□□ -0.57
SMAD1-211ENST00000512019 SMIM29Q86T20 159 aa11.48□□□□□ -0.57
SMAD1-211ENST00000512019 Q8NBF4 154 aa11.48□□□□□ -0.57
SMAD1-211ENST00000512019 F8WEM9 126 aa11.47□□□□□ -0.57
SMAD1-211ENST00000512019 LPAP08519 4548 aa11.45□□□□□ -0.58
SMAD1-211ENST00000512019 SSBP3-AS1Q7Z2R9 100 aa11.45□□□□□ -0.58
SMAD1-211ENST00000512019 TMEM256-PLSCR3K7ERE1 68 aa11.42□□□□□ -0.58
SMAD1-211ENST00000512019 LINC00304Q8N9R0 145 aa11.41□□□□□ -0.58
SMAD1-211ENST00000512019 SPCS1Q9Y6A9 102 aa11.4□□□□□ -0.58
SMAD1-211ENST00000512019 NDUFV3P56181 108 aaKnown RBP11.39□□□□□ -0.59
SMAD1-211ENST00000512019 C4orf48Q5BLP8 95 aa11.37□□□□□ -0.59
SMAD1-211ENST00000512019 SPAG11AQ6PDA7 123 aa11.37□□□□□ -0.59
SMAD1-211ENST00000512019 IGLV8-61A0A075B6I0 122 aa11.36□□□□□ -0.59
SMAD1-211ENST00000512019 BAALC-AS2P0C853 105 aa11.36□□□□□ -0.59
SMAD1-211ENST00000512019 UBE2V1Q13404 147 aa11.36□□□□□ -0.59
SMAD1-211ENST00000512019 C9JAW5 83 aa11.35□□□□□ -0.59
SMAD1-211ENST00000512019 Q6JHZ5 121 aa11.35□□□□□ -0.59
SMAD1-211ENST00000512019 H3BMG7 143 aa11.34□□□□□ -0.59
SMAD1-211ENST00000512019 K7EP34 96 aa11.32□□□□□ -0.6
SMAD1-211ENST00000512019 SPINK1P00995 79 aa11.31□□□□□ -0.6
SMAD1-211ENST00000512019 ANKRD29Q8N6D5 301 aa11.31□□□□□ -0.6
SMAD1-211ENST00000512019 CD164Q04900 197 aa11.29□□□□□ -0.6
SMAD1-211ENST00000512019 IGFL1Q6UW32 110 aa11.29□□□□□ -0.6
SMAD1-211ENST00000512019 GTF2H5Q6ZYL4 71 aa11.29□□□□□ -0.6
SMAD1-211ENST00000512019 H3BT86 120 aa11.28□□□□□ -0.6
SMAD1-211ENST00000512019 A0A1B0GV72 72 aa11.26□□□□□ -0.61
SMAD1-211ENST00000512019 RPS29P62273 56 aaKnown RBP11.26□□□□□ -0.61
SMAD1-211ENST00000512019 A0A0G2JQZ4 141 aa11.25□□□□□ -0.61
SMAD1-211ENST00000512019 HRCT1Q6UXD1 115 aa11.25□□□□□ -0.61
SMAD1-211ENST00000512019 MTURNQ8N3F0 131 aa11.24□□□□□ -0.61
SMAD1-211ENST00000512019 JMJD7-PLA2G4BH0Y9G9 81 aa11.23□□□□□ -0.61
SMAD1-211ENST00000512019 RBM3P98179 157 aaKnown RBP11.23□□□□□ -0.61
SMAD1-211ENST00000512019 LIMD2Q9BT23 127 aa11.22□□□□□ -0.61
SMAD1-211ENST00000512019 DSCR8Q96T75 97 aa11.21□□□□□ -0.61
SMAD1-211ENST00000512019 TRBV7-4A0A0J9YYF1 115 aa11.18□□□□□ -0.62
SMAD1-211ENST00000512019 Q6Q795 121 aa11.18□□□□□ -0.62
SMAD1-211ENST00000512019 TEN1Q86WV5 123 aa11.18□□□□□ -0.62
SMAD1-211ENST00000512019 TRBV7-7A0A0K0K1E9 115 aa11.17□□□□□ -0.62
SMAD1-211ENST00000512019 PRO0461Q9UI25 63 aa11.16□□□□□ -0.62
SMAD1-211ENST00000512019 Q5XG85 94 aa11.15□□□□□ -0.62
SMAD1-211ENST00000512019 CCKP06307 115 aa11.14□□□□□ -0.63
SMAD1-211ENST00000512019 SMCPP49901 116 aaPredicted RBP11.14□□□□□ -0.63
SMAD1-211ENST00000512019 PRR4Q16378 134 aa11.14□□□□□ -0.63
SMAD1-211ENST00000512019 OBSCN-AS1Q96MR7 158 aa11.14□□□□□ -0.63
SMAD1-211ENST00000512019 LOC110117498A0A087WWA1 95 aa11.12□□□□□ -0.63
SMAD1-211ENST00000512019 A0A1W2PNM2 257 aa11.12□□□□□ -0.63
SMAD1-211ENST00000512019 F8W1H4 67 aa11.12□□□□□ -0.63
SMAD1-211ENST00000512019 PDE6GP18545 87 aa11.12□□□□□ -0.63
SMAD1-211ENST00000512019 C14orf132Q9NPU4 83 aa11.11□□□□□ -0.63
SMAD1-211ENST00000512019 C21orf62-AS1Q17RA5 79 aa11.1□□□□□ -0.63
SMAD1-211ENST00000512019 RETNLBQ9BQ08 111 aa11.1□□□□□ -0.63
SMAD1-211ENST00000512019 SS18L2Q9UHA2 77 aa11.1□□□□□ -0.63
SMAD1-211ENST00000512019 MUC2Q02817 5179 aa11.09□□□□□ -0.63
SMAD1-211ENST00000512019 A0A1B0GV90 55 aa11.09□□□□□ -0.63
SMAD1-211ENST00000512019 VPS25Q9BRG1 176 aa11.09□□□□□ -0.63
SMAD1-211ENST00000512019 Q6ZQT0 140 aa11.08□□□□□ -0.64
SMAD1-211ENST00000512019 A0A087WSZ3 146 aa11.07□□□□□ -0.64
SMAD1-211ENST00000512019 FP248Q71RG6 208 aaPredicted RBP11.06□□□□□ -0.64
SMAD1-211ENST00000512019 ASB16-AS1Q495Z4 193 aa11.05□□□□□ -0.64
SMAD1-211ENST00000512019 A0A1B0GW54 56 aa11.02□□□□□ -0.65
SMAD1-211ENST00000512019 C1orf195Q5TG92 126 aa11□□□□□ -0.65
SMAD1-211ENST00000512019 IGLV7-46A0A075B6I9 117 aa10.99□□□□□ -0.65
SMAD1-211ENST00000512019 ETDBQ3ZM63 59 aa10.98□□□□□ -0.65
SMAD1-211ENST00000512019 FAT4Q6V0I7 4981 aa10.9□□□□□ -0.66
SMAD1-211ENST00000512019 TPRXLQ17RH7 258 aa10.9□□□□□ -0.66
SMAD1-211ENST00000512019 MUC17Q685J3 4493 aa10.9□□□□□ -0.67
SMAD1-211ENST00000512019 Q96NJ1 140 aa10.89□□□□□ -0.67
SMAD1-211ENST00000512019 A0A0U1RQV1 116 aa10.88□□□□□ -0.67
SMAD1-211ENST00000512019 LINC00472Q9H8W2 130 aa10.87□□□□□ -0.67
SMAD1-211ENST00000512019 KRTAP9-2Q9BYQ4 174 aa10.86□□□□□ -0.67
SMAD1-211ENST00000512019 SIGMAR1Q99720 223 aa10.85□□□□□ -0.67
SMAD1-211ENST00000512019 IGKV4-1P06312 121 aa10.84□□□□□ -0.67
SMAD1-211ENST00000512019 NREPQ16612 68 aa10.84□□□□□ -0.67
SMAD1-211ENST00000512019 KRTAP13-3Q3SY46 172 aa10.84□□□□□ -0.67
SMAD1-211ENST00000512019 LCE2AQ5TA79 106 aaPredicted RBP10.84□□□□□ -0.67
SMAD1-211ENST00000512019 J3KT08 172 aa10.82□□□□□ -0.68
SMAD1-211ENST00000512019 DEFB116Q30KQ4 102 aa10.81□□□□□ -0.68
SMAD1-211ENST00000512019 CDIP1Q9H305 208 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms