RNA–Protein interactions for RNA: ENST00000511985.1

PDGFC-207, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-207ENST00000511985 KRTAP6-2Q3LI66 62 aa-0.11□□□□□ -2.43
PDGFC-207ENST00000511985 HILPDAQ9Y5L2 63 aa-0.11□□□□□ -2.43
PDGFC-207ENST00000511985 PKD1L1Q8TDX9 2849 aa-0.11□□□□□ -2.43
PDGFC-207ENST00000511985 PCNX1Q96RV3 2341 aa-0.12□□□□□ -2.43
PDGFC-207ENST00000511985 RNF17Q9BXT8 1623 aaKnown RBP-0.12□□□□□ -2.43
PDGFC-207ENST00000511985 RICTORQ6R327 1708 aa-0.12□□□□□ -2.43
PDGFC-207ENST00000511985 ETDCA0A1B0GVM5 59 aa-0.12□□□□□ -2.43
PDGFC-207ENST00000511985 IAPPP10997 89 aa-0.12□□□□□ -2.43
PDGFC-207ENST00000511985 DEFB114Q30KQ6 69 aa-0.12□□□□□ -2.43
PDGFC-207ENST00000511985 PLCH1Q4KWH8 1693 aa-0.12□□□□□ -2.43
PDGFC-207ENST00000511985 SCN11AQ9UI33 1791 aa-0.12□□□□□ -2.43
PDGFC-207ENST00000511985 ASXL1Q8IXJ9 1541 aa-0.13□□□□□ -2.43
PDGFC-207ENST00000511985 BSNQ9UPA5 3926 aa-0.13□□□□□ -2.43
PDGFC-207ENST00000511985 RYR3Q15413 4870 aa-0.13□□□□□ -2.43
PDGFC-207ENST00000511985 PRLHP81277 87 aa-0.13□□□□□ -2.43
PDGFC-207ENST00000511985 ACANP16112 2415 aa-0.13□□□□□ -2.43
PDGFC-207ENST00000511985 HECTD4Q9Y4D8 3996 aa-0.13□□□□□ -2.43
PDGFC-207ENST00000511985 APC2O95996 2303 aa-0.13□□□□□ -2.43
PDGFC-207ENST00000511985 IQGAP3Q86VI3 1631 aa-0.13□□□□□ -2.43
PDGFC-207ENST00000511985 CNOT1A5YKK6 2376 aaKnown RBP-0.13□□□□□ -2.43
PDGFC-207ENST00000511985 RNF213Q63HN8 5207 aa-0.13□□□□□ -2.43
PDGFC-207ENST00000511985 RYR1P21817 5038 aa-0.14□□□□□ -2.43
PDGFC-207ENST00000511985 INO80Q9ULG1 1556 aaPredicted RBP-0.14□□□□□ -2.43
PDGFC-207ENST00000511985 STAB1Q9NY15 2570 aa-0.14□□□□□ -2.43
PDGFC-207ENST00000511985 SPRR2EP22531 72 aa-0.14□□□□□ -2.43
PDGFC-207ENST00000511985 RYR2Q92736 4967 aa-0.14□□□□□ -2.43
PDGFC-207ENST00000511985 WNK1Q9H4A3 2382 aa-0.14□□□□□ -2.43
PDGFC-207ENST00000511985 MYO5CQ9NQX4 1742 aa-0.15□□□□□ -2.43
PDGFC-207ENST00000511985 USH2AO75445 5202 aa-0.15□□□□□ -2.43
PDGFC-207ENST00000511985 MAP1BP46821 2468 aaKnown RBP-0.15□□□□□ -2.43
PDGFC-207ENST00000511985 GNG13Q9P2W3 67 aa-0.15□□□□□ -2.43
PDGFC-207ENST00000511985 UBR4Q5T4S7 5183 aa-0.16□□□□□ -2.43
PDGFC-207ENST00000511985 SETXQ7Z333 2677 aaKnown RBP-0.16□□□□□ -2.43
PDGFC-207ENST00000511985 KIAA0586Q9BVV6 1533 aa-0.16□□□□□ -2.43
PDGFC-207ENST00000511985 KNL1Q8NG31 2342 aa-0.16□□□□□ -2.43
PDGFC-207ENST00000511985 REV3LO60673 3130 aa-0.16□□□□□ -2.43
PDGFC-207ENST00000511985 PKHD1P08F94 4074 aa-0.16□□□□□ -2.43
PDGFC-207ENST00000511985 C9orf92A6NGG3 77 aa-0.16□□□□□ -2.44
PDGFC-207ENST00000511985 COL6A3P12111 3177 aa-0.16□□□□□ -2.44
PDGFC-207ENST00000511985 DDX60LQ5H9U9 1706 aaKnown RBP-0.16□□□□□ -2.44
PDGFC-207ENST00000511985 ZC3H13Q5T200 1668 aaKnown RBP-0.17□□□□□ -2.44
PDGFC-207ENST00000511985 KIAA1109Q2LD37 5005 aa-0.17□□□□□ -2.44
PDGFC-207ENST00000511985 LRRIQ1Q96JM4 1722 aa-0.17□□□□□ -2.44
PDGFC-207ENST00000511985 S4R3F8 94 aa-0.17□□□□□ -2.44
PDGFC-207ENST00000511985 ABCA9Q8IUA7 1624 aa-0.17□□□□□ -2.44
PDGFC-207ENST00000511985 NHSQ6T4R5 1651 aa-0.18□□□□□ -2.44
PDGFC-207ENST00000511985 EFCAB5A4FU69 1503 aa-0.18□□□□□ -2.44
PDGFC-207ENST00000511985 FLNBO75369 2602 aaKnown RBP-0.18□□□□□ -2.44
PDGFC-207ENST00000511985 LINC01549A6NIU2 74 aa-0.18□□□□□ -2.44
PDGFC-207ENST00000511985 H3BNG1 76 aa-0.18□□□□□ -2.44
PDGFC-207ENST00000511985 MT1AP04731 61 aa-0.18□□□□□ -2.44
PDGFC-207ENST00000511985 WT1-ASQ06250 92 aa-0.18□□□□□ -2.44
PDGFC-207ENST00000511985 HERC1Q15751 4861 aa-0.18□□□□□ -2.44
PDGFC-207ENST00000511985 ABCA13Q86UQ4 5058 aa-0.18□□□□□ -2.44
PDGFC-207ENST00000511985 ABCC6O95255 1503 aa-0.18□□□□□ -2.44
PDGFC-207ENST00000511985 HYDINQ4G0P3 5121 aa-0.18□□□□□ -2.44
PDGFC-207ENST00000511985 ITSN1Q15811 1721 aa-0.18□□□□□ -2.44
PDGFC-207ENST00000511985 PARP4Q9UKK3 1724 aaKnown RBP-0.18□□□□□ -2.44
PDGFC-207ENST00000511985 FLNAP21333 2647 aaKnown RBP-0.19□□□□□ -2.44
PDGFC-207ENST00000511985 A0A087WWC5 75 aa-0.19□□□□□ -2.44
PDGFC-207ENST00000511985 RPS27P42677 84 aaKnown RBP-0.19□□□□□ -2.44
PDGFC-207ENST00000511985 KRTAP19-7Q3SYF9 63 aa-0.19□□□□□ -2.44
PDGFC-207ENST00000511985 MINOS1Q5TGZ0 78 aa-0.19□□□□□ -2.44
PDGFC-207ENST00000511985 RPS27LQ71UM5 84 aaKnown RBP-0.19□□□□□ -2.44
PDGFC-207ENST00000511985 DEFB106AQ8N104 65 aa-0.19□□□□□ -2.44
PDGFC-207ENST00000511985 TJP1Q07157 1748 aa-0.19□□□□□ -2.44
PDGFC-207ENST00000511985 EPPK1P58107 5090 aaKnown RBP-0.19□□□□□ -2.44
PDGFC-207ENST00000511985 DNMBPQ6XZF7 1577 aa-0.19□□□□□ -2.44
PDGFC-207ENST00000511985 DNAH9Q9NYC9 4486 aa-0.2□□□□□ -2.44
PDGFC-207ENST00000511985 K7EMI3 77 aa-0.2□□□□□ -2.44
PDGFC-207ENST00000511985 PKD1P98161 4303 aa-0.2□□□□□ -2.44
PDGFC-207ENST00000511985 FAT1Q14517 4588 aa-0.2□□□□□ -2.44
PDGFC-207ENST00000511985 NRAPQ86VF7 1730 aa-0.21□□□□□ -2.44
PDGFC-207ENST00000511985 PDE4DIPQ5VU43 2346 aa-0.21□□□□□ -2.44
PDGFC-207ENST00000511985 HECTD1Q9ULT8 2610 aa-0.21□□□□□ -2.44
PDGFC-207ENST00000511985 SPRR2FQ96RM1 72 aa-0.21□□□□□ -2.44
PDGFC-207ENST00000511985 SONP18583 2426 aaKnown RBP-0.21□□□□□ -2.44
PDGFC-207ENST00000511985 MADDQ8WXG6 1647 aa-0.21□□□□□ -2.44
PDGFC-207ENST00000511985 AKAP13Q12802 2813 aa-0.21□□□□□ -2.44
PDGFC-207ENST00000511985 FAT3Q8TDW7 4589 aa-0.21□□□□□ -2.44
PDGFC-207ENST00000511985 CREBBPQ92793 2442 aa-0.22□□□□□ -2.44
PDGFC-207ENST00000511985 C6orf48Q9UBA6 75 aa-0.22□□□□□ -2.44
PDGFC-207ENST00000511985 ITSN2Q9NZM3 1697 aa-0.22□□□□□ -2.44
PDGFC-207ENST00000511985 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.22□□□□□ -2.44
PDGFC-207ENST00000511985 HERC2O95714 4834 aa-0.22□□□□□ -2.45
PDGFC-207ENST00000511985 C3P01024 1663 aa-0.23□□□□□ -2.45
PDGFC-207ENST00000511985 FLGP20930 4061 aaPredicted RBP-0.23□□□□□ -2.45
PDGFC-207ENST00000511985 ANK3Q12955 4377 aaKnown RBP-0.23□□□□□ -2.45
PDGFC-207ENST00000511985 DCHS2Q6V1P9 2916 aa-0.23□□□□□ -2.45
PDGFC-207ENST00000511985 SVEP1Q4LDE5 3571 aa-0.23□□□□□ -2.45
PDGFC-207ENST00000511985 SETD2Q9BYW2 2564 aaPredicted RBP-0.23□□□□□ -2.45
PDGFC-207ENST00000511985 SPTBN4Q9H254 2564 aa-0.23□□□□□ -2.45
PDGFC-207ENST00000511985 CLASP1Q7Z460 1538 aa-0.23□□□□□ -2.45
PDGFC-207ENST00000511985 TENM2Q9NT68 2774 aa-0.23□□□□□ -2.45
PDGFC-207ENST00000511985 SRRM2Q9UQ35 2752 aaKnown RBP-0.24□□□□□ -2.45
PDGFC-207ENST00000511985 TRANK1O15050 2925 aa-0.24□□□□□ -2.45
PDGFC-207ENST00000511985 SMIM31A0A1B0GVY4 71 aa-0.24□□□□□ -2.45
PDGFC-207ENST00000511985 H3BUA1 57 aa-0.24□□□□□ -2.45
PDGFC-207ENST00000511985 NCBP2-AS2Q69YL0 99 aa-0.24□□□□□ -2.45
PDGFC-207ENST00000511985 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms