RNA–Protein interactions for RNA: ENST00000509855.1

COL6A4P2-205, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 506 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-205ENST00000509855 LELP1Q5T871 98 aa0.83□□□□□ -2.28
COL6A4P2-205ENST00000509855 BPTFQ12830 3046 aa0.83□□□□□ -2.28
COL6A4P2-205ENST00000509855 DUOX1Q9NRD9 1551 aa0.83□□□□□ -2.28
COL6A4P2-205ENST00000509855 ASH1LQ9NR48 2969 aaKnown RBP0.82□□□□□ -2.28
COL6A4P2-205ENST00000509855 IGLV5-48A0A075B6I7 105 aa0.82□□□□□ -2.28
COL6A4P2-205ENST00000509855 RPS27P42677 84 aaKnown RBP0.82□□□□□ -2.28
COL6A4P2-205ENST00000509855 RPS27LQ71UM5 84 aaKnown RBP0.82□□□□□ -2.28
COL6A4P2-205ENST00000509855 PLCE1Q9P212 2302 aa0.82□□□□□ -2.28
COL6A4P2-205ENST00000509855 KIF21BO75037 1637 aa0.82□□□□□ -2.28
COL6A4P2-205ENST00000509855 CLTCL1P53675 1640 aa0.82□□□□□ -2.28
COL6A4P2-205ENST00000509855 TPRP12270 2363 aaKnown RBP0.81□□□□□ -2.28
COL6A4P2-205ENST00000509855 H0YGG7 62 aa0.81□□□□□ -2.28
COL6A4P2-205ENST00000509855 PIEZO2Q9H5I5 2752 aa0.81□□□□□ -2.28
COL6A4P2-205ENST00000509855 PKDREJQ9NTG1 2253 aa0.81□□□□□ -2.28
COL6A4P2-205ENST00000509855 C2CD3Q4AC94 2353 aa0.81□□□□□ -2.28
COL6A4P2-205ENST00000509855 KAAG1Q9UBP8 84 aa0.8□□□□□ -2.28
COL6A4P2-205ENST00000509855 IQGAP1P46940 1657 aa0.8□□□□□ -2.28
COL6A4P2-205ENST00000509855 GCC2Q8IWJ2 1684 aa0.8□□□□□ -2.28
COL6A4P2-205ENST00000509855 MROH2BQ7Z745 1585 aa0.79□□□□□ -2.28
COL6A4P2-205ENST00000509855 PRLHP81277 87 aa0.79□□□□□ -2.28
COL6A4P2-205ENST00000509855 SPTBN1Q01082 2364 aaKnown RBP0.79□□□□□ -2.28
COL6A4P2-205ENST00000509855 SPINK1P00995 79 aa0.78□□□□□ -2.28
COL6A4P2-205ENST00000509855 KLK9Q2XQG4 91 aa0.78□□□□□ -2.28
COL6A4P2-205ENST00000509855 SPINK6Q6UWN8 80 aa0.78□□□□□ -2.28
COL6A4P2-205ENST00000509855 DEFB106AQ8N104 65 aa0.78□□□□□ -2.28
COL6A4P2-205ENST00000509855 USF3Q68DE3 2245 aa0.78□□□□□ -2.28
COL6A4P2-205ENST00000509855 ZNF462Q96JM2 2506 aa0.77□□□□□ -2.29
COL6A4P2-205ENST00000509855 POLR2KP53803 58 aaKnown RBP0.77□□□□□ -2.29
COL6A4P2-205ENST00000509855 S4R3F8 94 aa0.77□□□□□ -2.29
COL6A4P2-205ENST00000509855 A8MTW9 85 aa0.76□□□□□ -2.29
COL6A4P2-205ENST00000509855 CACNA1HO95180 2353 aa0.76□□□□□ -2.29
COL6A4P2-205ENST00000509855 M0QY20 66 aa0.75□□□□□ -2.29
COL6A4P2-205ENST00000509855 PDE4DIPQ5VU43 2346 aa0.75□□□□□ -2.29
COL6A4P2-205ENST00000509855 ALMS1Q8TCU4 4167 aa0.75□□□□□ -2.29
COL6A4P2-205ENST00000509855 TTC28Q96AY4 2481 aa0.74□□□□□ -2.29
COL6A4P2-205ENST00000509855 KNL1Q8NG31 2342 aa0.74□□□□□ -2.29
COL6A4P2-205ENST00000509855 MMP24-AS1A0A0U1RRL7 71 aa0.74□□□□□ -2.29
COL6A4P2-205ENST00000509855 ARHGAP5-AS1Q96IT6 56 aa0.74□□□□□ -2.29
COL6A4P2-205ENST00000509855 ABCA2Q9BZC7 2435 aa0.74□□□□□ -2.29
COL6A4P2-205ENST00000509855 DEFB135Q30KP9 77 aa0.73□□□□□ -2.29
COL6A4P2-205ENST00000509855 MEGF8Q7Z7M0 2845 aa0.72□□□□□ -2.29
COL6A4P2-205ENST00000509855 M0QZ58 72 aa0.72□□□□□ -2.29
COL6A4P2-205ENST00000509855 RPL39P62891 51 aaKnown RBP0.72□□□□□ -2.29
COL6A4P2-205ENST00000509855 ABCA12Q86UK0 2595 aa0.71□□□□□ -2.3
COL6A4P2-205ENST00000509855 AKAP6Q13023 2319 aa0.71□□□□□ -2.3
COL6A4P2-205ENST00000509855 M0R2T5 61 aa0.71□□□□□ -2.3
COL6A4P2-205ENST00000509855 F8P00451 2351 aa0.71□□□□□ -2.3
COL6A4P2-205ENST00000509855 REV3LO60673 3130 aa0.71□□□□□ -2.3
COL6A4P2-205ENST00000509855 C9orf92A6NGG3 77 aa0.7□□□□□ -2.3
COL6A4P2-205ENST00000509855 TOMM7Q9P0U1 55 aa0.7□□□□□ -2.3
COL6A4P2-205ENST00000509855 U3KQA8 63 aa0.7□□□□□ -2.3
COL6A4P2-205ENST00000509855 RPL39LQ96EH5 51 aaKnown RBP0.69□□□□□ -2.3
COL6A4P2-205ENST00000509855 GVINP1Q7Z2Y8 2422 aa0.69□□□□□ -2.3
COL6A4P2-205ENST00000509855 AHNAKQ09666 5890 aaKnown RBP0.69□□□□□ -2.3
COL6A4P2-205ENST00000509855 POLQO75417 2590 aa0.68□□□□□ -2.3
COL6A4P2-205ENST00000509855 CHD9Q3L8U1 2897 aa0.68□□□□□ -2.3
COL6A4P2-205ENST00000509855 PRCDQ00LT1 54 aa0.68□□□□□ -2.3
COL6A4P2-205ENST00000509855 ZNF292O60281 2723 aa0.68□□□□□ -2.3
COL6A4P2-205ENST00000509855 CSPG4Q6UVK1 2322 aa0.67□□□□□ -2.3
COL6A4P2-205ENST00000509855 PCNX1Q96RV3 2341 aa0.67□□□□□ -2.3
COL6A4P2-205ENST00000509855 SPTA1P02549 2419 aa0.67□□□□□ -2.3
COL6A4P2-205ENST00000509855 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
COL6A4P2-205ENST00000509855 LINC01590Q5TEZ4 76 aa0.67□□□□□ -2.3
COL6A4P2-205ENST00000509855 CLPSL2Q6UWE3 100 aa0.67□□□□□ -2.3
COL6A4P2-205ENST00000509855 MACF1Q9UPN3 7388 aaKnown RBP0.66□□□□□ -2.3
COL6A4P2-205ENST00000509855 TRANK1O15050 2925 aa0.66□□□□□ -2.3
COL6A4P2-205ENST00000509855 PTPN13Q12923 2485 aa0.65□□□□□ -2.3
COL6A4P2-205ENST00000509855 DSPP15924 2871 aaKnown RBP0.65□□□□□ -2.31
COL6A4P2-205ENST00000509855 PIEZO1Q92508 2521 aa0.65□□□□□ -2.31
COL6A4P2-205ENST00000509855 TNP1P09430 55 aa0.65□□□□□ -2.31
COL6A4P2-205ENST00000509855 PKD1L2Q7Z442 2459 aa0.64□□□□□ -2.31
COL6A4P2-205ENST00000509855 CREBBPQ92793 2442 aa0.64□□□□□ -2.31
COL6A4P2-205ENST00000509855 BDP1A6H8Y1 2624 aa0.64□□□□□ -2.31
COL6A4P2-205ENST00000509855 LEAP2Q969E1 77 aa0.64□□□□□ -2.31
COL6A4P2-205ENST00000509855 SMR3AQ99954 134 aa0.64□□□□□ -2.31
COL6A4P2-205ENST00000509855 HECTD1Q9ULT8 2610 aa0.64□□□□□ -2.31
COL6A4P2-205ENST00000509855 USP24Q9UPU5 2620 aa0.64□□□□□ -2.31
COL6A4P2-205ENST00000509855 IGF2RP11717 2491 aa0.63□□□□□ -2.31
COL6A4P2-205ENST00000509855 CELSR2Q9HCU4 2923 aa0.63□□□□□ -2.31
COL6A4P2-205ENST00000509855 K7EIM0 57 aa0.63□□□□□ -2.31
COL6A4P2-205ENST00000509855 TTTY10Q9BZA0 68 aa0.63□□□□□ -2.31
COL6A4P2-205ENST00000509855 CHD8Q9HCK8 2581 aa0.63□□□□□ -2.31
COL6A4P2-205ENST00000509855 COL6A3P12111 3177 aa0.63□□□□□ -2.31
COL6A4P2-205ENST00000509855 UBR4Q5T4S7 5183 aa0.63□□□□□ -2.31
COL6A4P2-205ENST00000509855 TENM4Q6N022 2769 aa0.62□□□□□ -2.31
COL6A4P2-205ENST00000509855 CSMD3Q7Z407 3707 aa0.62□□□□□ -2.31
COL6A4P2-205ENST00000509855 CEP290O15078 2479 aa0.62□□□□□ -2.31
COL6A4P2-205ENST00000509855 ANK2Q01484 3957 aa0.61□□□□□ -2.31
COL6A4P2-205ENST00000509855 MUC5BQ9HC84 5762 aaPredicted RBP0.61□□□□□ -2.31
COL6A4P2-205ENST00000509855 CACNA1AO00555 2505 aa0.61□□□□□ -2.31
COL6A4P2-205ENST00000509855 H3BNG1 76 aa0.61□□□□□ -2.31
COL6A4P2-205ENST00000509855 SPART-AS1P0CW21 52 aa0.61□□□□□ -2.31
COL6A4P2-205ENST00000509855 HIVEP3Q5T1R4 2406 aa0.61□□□□□ -2.31
COL6A4P2-205ENST00000509855 PCLOQ9Y6V0 5065 aa0.61□□□□□ -2.31
COL6A4P2-205ENST00000509855 NCOR1O75376 2440 aa0.6□□□□□ -2.31
COL6A4P2-205ENST00000509855 EP300Q09472 2414 aaPredicted RBP0.6□□□□□ -2.31
COL6A4P2-205ENST00000509855 ATRQ13535 2644 aa0.6□□□□□ -2.31
COL6A4P2-205ENST00000509855 APC2O95996 2303 aa0.59□□□□□ -2.31
COL6A4P2-205ENST00000509855 PHGR1C9JFL3 82 aa0.59□□□□□ -2.31
COL6A4P2-205ENST00000509855 H3BUX3 64 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms