RNA–Protein interactions for RNA: ENST00000509691.1

SEC31A-229, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 2

Gene SEC31A, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-229ENST00000509691 JMJD1CQ15652 2540 aa0.38□□□□□ -2.35
SEC31A-229ENST00000509691 CDC42BPAQ5VT25 1732 aa0.38□□□□□ -2.35
SEC31A-229ENST00000509691 NAV3Q8IVL0 2385 aa0.38□□□□□ -2.35
SEC31A-229ENST00000509691 ABCA1O95477 2261 aa0.38□□□□□ -2.35
SEC31A-229ENST00000509691 MROH2BQ7Z745 1585 aa0.37□□□□□ -2.35
SEC31A-229ENST00000509691 MEGF8Q7Z7M0 2845 aa0.37□□□□□ -2.35
SEC31A-229ENST00000509691 MMP24-AS1A0A0U1RRL7 71 aa0.37□□□□□ -2.35
SEC31A-229ENST00000509691 SPINK1P00995 79 aa0.37□□□□□ -2.35
SEC31A-229ENST00000509691 POLR2KP53803 58 aaKnown RBP0.37□□□□□ -2.35
SEC31A-229ENST00000509691 SMR3AQ99954 134 aa0.37□□□□□ -2.35
SEC31A-229ENST00000509691 SYNE2Q8WXH0 6885 aaKnown RBP0.36□□□□□ -2.35
SEC31A-229ENST00000509691 FAM208BQ5VWN6 2430 aa0.36□□□□□ -2.35
SEC31A-229ENST00000509691 ASXL3Q9C0F0 2248 aa0.36□□□□□ -2.35
SEC31A-229ENST00000509691 RPL39P62891 51 aaKnown RBP0.36□□□□□ -2.35
SEC31A-229ENST00000509691 DEFB135Q30KP9 77 aa0.36□□□□□ -2.35
SEC31A-229ENST00000509691 ARHGAP5-AS1Q96IT6 56 aa0.36□□□□□ -2.35
SEC31A-229ENST00000509691 APCP25054 2843 aa0.36□□□□□ -2.35
SEC31A-229ENST00000509691 CACNA1EQ15878 2313 aa0.36□□□□□ -2.35
SEC31A-229ENST00000509691 MYO7AQ13402 2215 aa0.36□□□□□ -2.35
SEC31A-229ENST00000509691 CLTCL1P53675 1640 aa0.35□□□□□ -2.35
SEC31A-229ENST00000509691 M0QY20 66 aa0.35□□□□□ -2.35
SEC31A-229ENST00000509691 RPL39LQ96EH5 51 aaKnown RBP0.35□□□□□ -2.35
SEC31A-229ENST00000509691 CACNA1CQ13936 2221 aa0.35□□□□□ -2.35
SEC31A-229ENST00000509691 TNCP24821 2201 aa0.34□□□□□ -2.35
SEC31A-229ENST00000509691 GCC2Q8IWJ2 1684 aa0.34□□□□□ -2.35
SEC31A-229ENST00000509691 A8MTW9 85 aa0.34□□□□□ -2.36
SEC31A-229ENST00000509691 M0R2T5 61 aa0.34□□□□□ -2.36
SEC31A-229ENST00000509691 LEAP2Q969E1 77 aa0.34□□□□□ -2.36
SEC31A-229ENST00000509691 TOMM7Q9P0U1 55 aa0.34□□□□□ -2.36
SEC31A-229ENST00000509691 U3KQA8 63 aa0.34□□□□□ -2.36
SEC31A-229ENST00000509691 CADP27708 2225 aa0.34□□□□□ -2.36
SEC31A-229ENST00000509691 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.33□□□□□ -2.36
SEC31A-229ENST00000509691 M0QZ58 72 aa0.33□□□□□ -2.36
SEC31A-229ENST00000509691 KRTAP21-1Q3LI58 79 aa0.33□□□□□ -2.36
SEC31A-229ENST00000509691 CLPSL2Q6UWE3 100 aa0.33□□□□□ -2.36
SEC31A-229ENST00000509691 FSIP2Q5CZC0 6907 aa0.33□□□□□ -2.36
SEC31A-229ENST00000509691 GOLGA4Q13439 2230 aaKnown RBP0.32□□□□□ -2.36
SEC31A-229ENST00000509691 KRTAP2-3P0C7H8 128 aa0.32□□□□□ -2.36
SEC31A-229ENST00000509691 KRTAP2-4Q9BYR9 128 aa0.32□□□□□ -2.36
SEC31A-229ENST00000509691 KRTAP2-1Q9BYU5 128 aa0.32□□□□□ -2.36
SEC31A-229ENST00000509691 TTTY10Q9BZA0 68 aa0.32□□□□□ -2.36
SEC31A-229ENST00000509691 PIEZO2Q9H5I5 2752 aa0.32□□□□□ -2.36
SEC31A-229ENST00000509691 URB1O60287 2271 aaKnown RBP0.31□□□□□ -2.36
SEC31A-229ENST00000509691 C9orf92A6NGG3 77 aa0.31□□□□□ -2.36
SEC31A-229ENST00000509691 PRCDQ00LT1 54 aa0.31□□□□□ -2.36
SEC31A-229ENST00000509691 LINC01590Q5TEZ4 76 aa0.31□□□□□ -2.36
SEC31A-229ENST00000509691 H3BNG1 76 aa0.3□□□□□ -2.36
SEC31A-229ENST00000509691 H3BSH0 61 aa0.3□□□□□ -2.36
SEC31A-229ENST00000509691 TNP1P09430 55 aa0.3□□□□□ -2.36
SEC31A-229ENST00000509691 MACF1Q9UPN3 7388 aaKnown RBP0.3□□□□□ -2.36
SEC31A-229ENST00000509691 WNK2Q9Y3S1 2297 aa0.3□□□□□ -2.36
SEC31A-229ENST00000509691 TTC28Q96AY4 2481 aa0.29□□□□□ -2.36
SEC31A-229ENST00000509691 KMT2DO14686 5537 aa0.29□□□□□ -2.36
SEC31A-229ENST00000509691 PTPRQQ9UMZ3 2332 aa0.29□□□□□ -2.36
SEC31A-229ENST00000509691 PHGR1C9JFL3 82 aa0.29□□□□□ -2.36
SEC31A-229ENST00000509691 SPART-AS1P0CW21 52 aa0.29□□□□□ -2.36
SEC31A-229ENST00000509691 AHCTF1Q8WYP5 2266 aa0.29□□□□□ -2.36
SEC31A-229ENST00000509691 USP24Q9UPU5 2620 aa0.28□□□□□ -2.36
SEC31A-229ENST00000509691 K7EIM0 57 aa0.28□□□□□ -2.36
SEC31A-229ENST00000509691 PRM1P04553 51 aa0.28□□□□□ -2.36
SEC31A-229ENST00000509691 DEFB110Q30KQ9 67 aa0.28□□□□□ -2.36
SEC31A-229ENST00000509691 DEFB104AQ8WTQ1 72 aa0.28□□□□□ -2.36
SEC31A-229ENST00000509691 CNOT1A5YKK6 2376 aaKnown RBP0.28□□□□□ -2.36
SEC31A-229ENST00000509691 USF3Q68DE3 2245 aa0.27□□□□□ -2.37
SEC31A-229ENST00000509691 PTPRZ1P23471 2315 aaPredicted RBP0.27□□□□□ -2.37
SEC31A-229ENST00000509691 SPTBN2O15020 2390 aa0.26□□□□□ -2.37
SEC31A-229ENST00000509691 POLQO75417 2590 aa0.26□□□□□ -2.37
SEC31A-229ENST00000509691 TMEM167AQ8TBQ9 72 aa0.26□□□□□ -2.37
SEC31A-229ENST00000509691 PLCE1Q9P212 2302 aa0.26□□□□□ -2.37
SEC31A-229ENST00000509691 PIEZO1Q92508 2521 aa0.26□□□□□ -2.37
SEC31A-229ENST00000509691 TENM4Q6N022 2769 aa0.26□□□□□ -2.37
SEC31A-229ENST00000509691 C2CD3Q4AC94 2353 aa0.25□□□□□ -2.37
SEC31A-229ENST00000509691 ANK2Q01484 3957 aa0.25□□□□□ -2.37
SEC31A-229ENST00000509691 ABCA12Q86UK0 2595 aa0.25□□□□□ -2.37
SEC31A-229ENST00000509691 ABCA2Q9BZC7 2435 aa0.25□□□□□ -2.37
SEC31A-229ENST00000509691 TPRP12270 2363 aaKnown RBP0.25□□□□□ -2.37
SEC31A-229ENST00000509691 PCNX1Q96RV3 2341 aa0.25□□□□□ -2.37
SEC31A-229ENST00000509691 CACNA1HO95180 2353 aa0.24□□□□□ -2.37
SEC31A-229ENST00000509691 SPTBN1Q01082 2364 aaKnown RBP0.24□□□□□ -2.37
SEC31A-229ENST00000509691 DOPEY2Q9Y3R5 2298 aa0.24□□□□□ -2.37
SEC31A-229ENST00000509691 SPRR2DP22532 72 aa0.24□□□□□ -2.37
SEC31A-229ENST00000509691 RHPN1-AS1Q9BWJ2 59 aa0.24□□□□□ -2.37
SEC31A-229ENST00000509691 NAV2Q8IVL1 2488 aa0.24□□□□□ -2.37
SEC31A-229ENST00000509691 BDP1A6H8Y1 2624 aa0.23□□□□□ -2.37
SEC31A-229ENST00000509691 DEFB108AA8MXU0 73 aa0.23□□□□□ -2.37
SEC31A-229ENST00000509691 H3BUX3 64 aa0.23□□□□□ -2.37
SEC31A-229ENST00000509691 SPRR2BP35325 72 aa0.23□□□□□ -2.37
SEC31A-229ENST00000509691 RPL39P5Q59GN2 51 aa0.23□□□□□ -2.37
SEC31A-229ENST00000509691 ZNF292O60281 2723 aa0.23□□□□□ -2.37
SEC31A-229ENST00000509691 FAT4Q6V0I7 4981 aa0.22□□□□□ -2.37
SEC31A-229ENST00000509691 EP300Q09472 2414 aaPredicted RBP0.22□□□□□ -2.37
SEC31A-229ENST00000509691 F8P00451 2351 aa0.22□□□□□ -2.37
SEC31A-229ENST00000509691 KRTAP8-1Q8IUC2 63 aa0.22□□□□□ -2.37
SEC31A-229ENST00000509691 HECTD1Q9ULT8 2610 aa0.22□□□□□ -2.37
SEC31A-229ENST00000509691 AKAP13Q12802 2813 aa0.22□□□□□ -2.37
SEC31A-229ENST00000509691 IGF2RP11717 2491 aa0.22□□□□□ -2.37
SEC31A-229ENST00000509691 GVINP1Q7Z2Y8 2422 aa0.22□□□□□ -2.37
SEC31A-229ENST00000509691 PKDREJQ9NTG1 2253 aa0.21□□□□□ -2.38
SEC31A-229ENST00000509691 A0A096LNI7 61 aa0.21□□□□□ -2.38
SEC31A-229ENST00000509691 SPRR2AP35326 72 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms