RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 TMEM238LA0A1B0GVL6 79 aa4.97□□□□□ -1.61
PDLIM5-213ENST00000509357 A6NJY4 79 aa4.97□□□□□ -1.61
PDLIM5-213ENST00000509357 Q1RN00 199 aa4.97□□□□□ -1.61
PDLIM5-213ENST00000509357 FP248Q71RG6 208 aaPredicted RBP4.97□□□□□ -1.61
PDLIM5-213ENST00000509357 hADV29S1A0JD25 119 aa4.96□□□□□ -1.62
PDLIM5-213ENST00000509357 TPRXLQ17RH7 258 aa4.96□□□□□ -1.62
PDLIM5-213ENST00000509357 LAMTOR3Q9UHA4 124 aa4.96□□□□□ -1.62
PDLIM5-213ENST00000509357 A0A0U1RQV1 116 aa4.95□□□□□ -1.62
PDLIM5-213ENST00000509357 TEX49A0A1B0GTD5 131 aa4.95□□□□□ -1.62
PDLIM5-213ENST00000509357 TSTD3H0UI37 97 aa4.95□□□□□ -1.62
PDLIM5-213ENST00000509357 MUC17Q685J3 4493 aa4.94□□□□□ -1.62
PDLIM5-213ENST00000509357 SLC25A20O43772 301 aa4.94□□□□□ -1.62
PDLIM5-213ENST00000509357 VAMP3Q15836 100 aa4.93□□□□□ -1.62
PDLIM5-213ENST00000509357 HRCT1Q6UXD1 115 aa4.93□□□□□ -1.62
PDLIM5-213ENST00000509357 SNHG12Q9BXW3 62 aa4.93□□□□□ -1.62
PDLIM5-213ENST00000509357 RPS29P62273 56 aaKnown RBP4.92□□□□□ -1.62
PDLIM5-213ENST00000509357 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.92□□□□□ -1.62
PDLIM5-213ENST00000509357 H0YGX0 51 aa4.91□□□□□ -1.62
PDLIM5-213ENST00000509357 M0R143 59 aa4.91□□□□□ -1.62
PDLIM5-213ENST00000509357 TAX1BP3O14907 124 aa4.91□□□□□ -1.62
PDLIM5-213ENST00000509357 BATFQ16520 125 aa4.91□□□□□ -1.62
PDLIM5-213ENST00000509357 IGLV8-61A0A075B6I0 122 aa4.9□□□□□ -1.63
PDLIM5-213ENST00000509357 H3BUT2 72 aa4.9□□□□□ -1.63
PDLIM5-213ENST00000509357 LIMD2Q9BT23 127 aa4.9□□□□□ -1.63
PDLIM5-213ENST00000509357 LST1O00453 97 aa4.89□□□□□ -1.63
PDLIM5-213ENST00000509357 TCL1BO95988 128 aa4.89□□□□□ -1.63
PDLIM5-213ENST00000509357 PSMB2P49721 201 aa4.89□□□□□ -1.63
PDLIM5-213ENST00000509357 KRTAP13-3Q3SY46 172 aa4.89□□□□□ -1.63
PDLIM5-213ENST00000509357 IGFL1Q6UW32 110 aa4.89□□□□□ -1.63
PDLIM5-213ENST00000509357 FAT4Q6V0I7 4981 aa4.88□□□□□ -1.63
PDLIM5-213ENST00000509357 A0A1B0GX51 115 aa4.88□□□□□ -1.63
PDLIM5-213ENST00000509357 F8WEM9 126 aa4.86□□□□□ -1.63
PDLIM5-213ENST00000509357 NDUFV3P56181 108 aaKnown RBP4.86□□□□□ -1.63
PDLIM5-213ENST00000509357 SEC61BP60468 96 aaKnown RBP4.86□□□□□ -1.63
PDLIM5-213ENST00000509357 OCIAD2Q56VL3 154 aa4.86□□□□□ -1.63
PDLIM5-213ENST00000509357 A0A1B0GV72 72 aa4.85□□□□□ -1.63
PDLIM5-213ENST00000509357 C9orf118A6NHY6 69 aa4.85□□□□□ -1.63
PDLIM5-213ENST00000509357 TRACP01848 142 aa4.85□□□□□ -1.63
PDLIM5-213ENST00000509357 CD164Q04900 197 aa4.85□□□□□ -1.63
PDLIM5-213ENST00000509357 PPDPFLQ8WWR9 84 aa4.85□□□□□ -1.63
PDLIM5-213ENST00000509357 PCP4L1A6NKN8 68 aa4.84□□□□□ -1.63
PDLIM5-213ENST00000509357 A0A1W2PNM2 257 aa4.83□□□□□ -1.64
PDLIM5-213ENST00000509357 SCGB1C2P0DMR2 95 aa4.83□□□□□ -1.64
PDLIM5-213ENST00000509357 FABP2P12104 132 aa4.83□□□□□ -1.64
PDLIM5-213ENST00000509357 ASB16-AS1Q495Z4 193 aa4.83□□□□□ -1.64
PDLIM5-213ENST00000509357 ORMDL1Q9P0S3 153 aa4.83□□□□□ -1.64
PDLIM5-213ENST00000509357 A0A1W2PPM0 123 aa4.82□□□□□ -1.64
PDLIM5-213ENST00000509357 C9orf92A6NGG3 77 aa4.82□□□□□ -1.64
PDLIM5-213ENST00000509357 SNCGO76070 127 aa4.82□□□□□ -1.64
PDLIM5-213ENST00000509357 COX6CP09669 75 aa4.82□□□□□ -1.64
PDLIM5-213ENST00000509357 MTURNQ8N3F0 131 aa4.82□□□□□ -1.64
PDLIM5-213ENST00000509357 TRBV7-7A0A0K0K1E9 115 aa4.81□□□□□ -1.64
PDLIM5-213ENST00000509357 H3BMG7 143 aa4.81□□□□□ -1.64
PDLIM5-213ENST00000509357 XP32Q5T750 250 aa4.81□□□□□ -1.64
PDLIM5-213ENST00000509357 C1orf195Q5TG92 126 aa4.81□□□□□ -1.64
PDLIM5-213ENST00000509357 Q5XG85 94 aa4.81□□□□□ -1.64
PDLIM5-213ENST00000509357 DNAL4O96015 105 aa4.8□□□□□ -1.64
PDLIM5-213ENST00000509357 Q6JHZ5 121 aa4.8□□□□□ -1.64
PDLIM5-213ENST00000509357 TRBV7-4A0A0J9YYF1 115 aa4.79□□□□□ -1.64
PDLIM5-213ENST00000509357 BAALC-AS2P0C853 105 aa4.79□□□□□ -1.64
PDLIM5-213ENST00000509357 SMCPP49901 116 aaPredicted RBP4.79□□□□□ -1.64
PDLIM5-213ENST00000509357 UBE2V1Q13404 147 aa4.79□□□□□ -1.64
PDLIM5-213ENST00000509357 ATXN8Q156A1 80 aa4.79□□□□□ -1.64
PDLIM5-213ENST00000509357 Q6Q795 121 aa4.79□□□□□ -1.64
PDLIM5-213ENST00000509357 Q96NJ1 140 aa4.79□□□□□ -1.64
PDLIM5-213ENST00000509357 TMEM256-PLSCR3K7ERE1 68 aa4.78□□□□□ -1.64
PDLIM5-213ENST00000509357 C9JAW5 83 aa4.77□□□□□ -1.65
PDLIM5-213ENST00000509357 COL5A1-AS1Q5SY13 56 aa4.77□□□□□ -1.65
PDLIM5-213ENST00000509357 ANKRD29Q8N6D5 301 aa4.77□□□□□ -1.65
PDLIM5-213ENST00000509357 OBSCN-AS1Q96MR7 158 aa4.77□□□□□ -1.65
PDLIM5-213ENST00000509357 PRO0461Q9UI25 63 aa4.77□□□□□ -1.65
PDLIM5-213ENST00000509357 TRBV20-1A0A075B6N2 111 aa4.75□□□□□ -1.65
PDLIM5-213ENST00000509357 A0A087WSZ3 146 aa4.75□□□□□ -1.65
PDLIM5-213ENST00000509357 PCOTHQ58A44 107 aa4.75□□□□□ -1.65
PDLIM5-213ENST00000509357 TEN1Q86WV5 123 aa4.75□□□□□ -1.65
PDLIM5-213ENST00000509357 SPCS1Q9Y6A9 102 aa4.75□□□□□ -1.65
PDLIM5-213ENST00000509357 GHRHP01286 108 aa4.74□□□□□ -1.65
PDLIM5-213ENST00000509357 KRTAP4-1Q9BYQ7 146 aa4.74□□□□□ -1.65
PDLIM5-213ENST00000509357 K7EP34 96 aa4.73□□□□□ -1.65
PDLIM5-213ENST00000509357 LCE2AQ5TA79 106 aaPredicted RBP4.73□□□□□ -1.65
PDLIM5-213ENST00000509357 Q6ZQT0 140 aa4.73□□□□□ -1.65
PDLIM5-213ENST00000509357 H3BQ85 93 aa4.72□□□□□ -1.65
PDLIM5-213ENST00000509357 CCKP06307 115 aa4.72□□□□□ -1.65
PDLIM5-213ENST00000509357 RBM3P98179 157 aaKnown RBP4.72□□□□□ -1.65
PDLIM5-213ENST00000509357 LYRM7Q5U5X0 104 aa4.72□□□□□ -1.65
PDLIM5-213ENST00000509357 C14orf132Q9NPU4 83 aa4.72□□□□□ -1.65
PDLIM5-213ENST00000509357 H3BT86 120 aa4.71□□□□□ -1.66
PDLIM5-213ENST00000509357 LINC00472Q9H8W2 130 aa4.71□□□□□ -1.66
PDLIM5-213ENST00000509357 LOC110117498A0A087WWA1 95 aa4.7□□□□□ -1.66
PDLIM5-213ENST00000509357 DEFB116Q30KQ4 102 aa4.69□□□□□ -1.66
PDLIM5-213ENST00000509357 NOTCH2NLQ7Z3S9 236 aa4.69□□□□□ -1.66
PDLIM5-213ENST00000509357 VPS25Q9BRG1 176 aa4.69□□□□□ -1.66
PDLIM5-213ENST00000509357 SS18L2Q9UHA2 77 aa4.69□□□□□ -1.66
PDLIM5-213ENST00000509357 RPL37P61927 97 aaKnown RBP4.68□□□□□ -1.66
PDLIM5-213ENST00000509357 DSCR8Q96T75 97 aa4.67□□□□□ -1.66
PDLIM5-213ENST00000509357 JMJD7-PLA2G4BH0Y9G9 81 aa4.66□□□□□ -1.66
PDLIM5-213ENST00000509357 ATP11AUNQ6ZP68 121 aa4.66□□□□□ -1.66
PDLIM5-213ENST00000509357 KRTAP16-1A8MUX0 517 aa4.65□□□□□ -1.67
PDLIM5-213ENST00000509357 KRTAP9-2Q9BYQ4 174 aa4.65□□□□□ -1.67
PDLIM5-213ENST00000509357 DSCR10P59022 87 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms