RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 BRD3OSQ6XYD6 125 aa2.92□□□□□ -1.94
LINC01088-205ENST00000509088 ACACAQ13085 2346 aa2.92□□□□□ -1.94
LINC01088-205ENST00000509088 MKI67P46013 3256 aaKnown RBP2.92□□□□□ -1.94
LINC01088-205ENST00000509088 USP34Q70CQ2 3546 aa2.92□□□□□ -1.94
LINC01088-205ENST00000509088 NCOR1O75376 2440 aa2.91□□□□□ -1.94
LINC01088-205ENST00000509088 PTPRZ1P23471 2315 aaPredicted RBP2.91□□□□□ -1.94
LINC01088-205ENST00000509088 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.91□□□□□ -1.94
LINC01088-205ENST00000509088 SPTAN1Q13813 2472 aaKnown RBP2.91□□□□□ -1.94
LINC01088-205ENST00000509088 ALMS1Q8TCU4 4167 aa2.91□□□□□ -1.94
LINC01088-205ENST00000509088 KMT2BQ9UMN6 2715 aaPredicted RBP2.91□□□□□ -1.94
LINC01088-205ENST00000509088 K7ERS5 55 aa2.91□□□□□ -1.94
LINC01088-205ENST00000509088 IGLV7-43P04211 117 aa2.91□□□□□ -1.94
LINC01088-205ENST00000509088 CHTF8P0CG12 524 aa2.91□□□□□ -1.94
LINC01088-205ENST00000509088 SPRR1BP22528 89 aa2.91□□□□□ -1.94
LINC01088-205ENST00000509088 PCOTHQ58A44 107 aa2.91□□□□□ -1.94
LINC01088-205ENST00000509088 SPTA1P02549 2419 aa2.91□□□□□ -1.94
LINC01088-205ENST00000509088 DEFB116Q30KQ4 102 aa2.9□□□□□ -1.95
LINC01088-205ENST00000509088 ANKRD17O75179 2603 aaKnown RBP2.9□□□□□ -1.95
LINC01088-205ENST00000509088 MAP1AP78559 2803 aaPredicted RBP2.9□□□□□ -1.95
LINC01088-205ENST00000509088 PKD1L2Q7Z442 2459 aa2.9□□□□□ -1.95
LINC01088-205ENST00000509088 PRUNE2Q8WUY3 3088 aa2.89□□□□□ -1.95
LINC01088-205ENST00000509088 PRO3102Q9H379 93 aa2.89□□□□□ -1.95
LINC01088-205ENST00000509088 NUPR2A6NF83 97 aa2.88□□□□□ -1.95
LINC01088-205ENST00000509088 H3BNG1 76 aa2.88□□□□□ -1.95
LINC01088-205ENST00000509088 DEFB130BP0DP73 79 aa2.88□□□□□ -1.95
LINC01088-205ENST00000509088 DEFB130AP0DP74 79 aa2.88□□□□□ -1.95
LINC01088-205ENST00000509088 LINC00483Q53H64 154 aa2.88□□□□□ -1.95
LINC01088-205ENST00000509088 C15orf56Q8N910 161 aa2.88□□□□□ -1.95
LINC01088-205ENST00000509088 MRPL34Q9BQ48 92 aaKnown RBP2.88□□□□□ -1.95
LINC01088-205ENST00000509088 C8orf17Q9NRJ1 99 aa2.88□□□□□ -1.95
LINC01088-205ENST00000509088 CFAP47Q6ZTR5 3102 aa2.87□□□□□ -1.95
LINC01088-205ENST00000509088 ZDBF2Q9HCK1 2354 aa2.87□□□□□ -1.95
LINC01088-205ENST00000509088 A8MUU9 505 aa2.86□□□□□ -1.95
LINC01088-205ENST00000509088 BRCA2P51587 3418 aa2.86□□□□□ -1.95
LINC01088-205ENST00000509088 TRIOBPQ9H2D6 2365 aa2.86□□□□□ -1.95
LINC01088-205ENST00000509088 SPTBN5Q9NRC6 3674 aaKnown RBP2.86□□□□□ -1.95
LINC01088-205ENST00000509088 SPG11Q96JI7 2443 aa2.85□□□□□ -1.95
LINC01088-205ENST00000509088 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
LINC01088-205ENST00000509088 UNC79Q9P2D8 2635 aa2.85□□□□□ -1.95
LINC01088-205ENST00000509088 A0A1B0GVX0 72 aa2.85□□□□□ -1.95
LINC01088-205ENST00000509088 KRTAP5-7Q6L8G8 165 aa2.85□□□□□ -1.95
LINC01088-205ENST00000509088 KRTAP26-1Q6PEX3 210 aa2.85□□□□□ -1.95
LINC01088-205ENST00000509088 WDFY4Q6ZS81 3184 aa2.85□□□□□ -1.95
LINC01088-205ENST00000509088 LY6G6CO95867 125 aa2.84□□□□□ -1.95
LINC01088-205ENST00000509088 C20orf166-AS1Q96NR2 134 aa2.84□□□□□ -1.95
LINC01088-205ENST00000509088 LAMA3Q16787 3333 aa2.84□□□□□ -1.96
LINC01088-205ENST00000509088 FREM2Q5SZK8 3169 aa2.84□□□□□ -1.96
LINC01088-205ENST00000509088 ITPR1Q14643 2758 aa2.83□□□□□ -1.96
LINC01088-205ENST00000509088 Q5W150 140 aa2.83□□□□□ -1.96
LINC01088-205ENST00000509088 C10orf99Q6UWK7 81 aa2.83□□□□□ -1.96
LINC01088-205ENST00000509088 DMXL2Q8TDJ6 3036 aa2.83□□□□□ -1.96
LINC01088-205ENST00000509088 CHD6Q8TD26 2715 aa2.83□□□□□ -1.96
LINC01088-205ENST00000509088 SPART-AS1P0CW21 52 aa2.82□□□□□ -1.96
LINC01088-205ENST00000509088 CCL19Q99731 98 aa2.82□□□□□ -1.96
LINC01088-205ENST00000509088 REV3LO60673 3130 aa2.82□□□□□ -1.96
LINC01088-205ENST00000509088 VCANP13611 3396 aa2.81□□□□□ -1.96
LINC01088-205ENST00000509088 GVINP1Q7Z2Y8 2422 aa2.81□□□□□ -1.96
LINC01088-205ENST00000509088 NCOR2Q9Y618 2525 aa2.81□□□□□ -1.96
LINC01088-205ENST00000509088 P0C880 135 aa2.81□□□□□ -1.96
LINC01088-205ENST00000509088 DEFB136Q30KP8 78 aa2.81□□□□□ -1.96
LINC01088-205ENST00000509088 TLN1Q9Y490 2541 aaKnown RBP2.8□□□□□ -1.96
LINC01088-205ENST00000509088 ABCA2Q9BZC7 2435 aa2.8□□□□□ -1.96
LINC01088-205ENST00000509088 LINC01556Q5JQF7 62 aa2.8□□□□□ -1.96
LINC01088-205ENST00000509088 RIF1Q5UIP0 2472 aaKnown RBP2.8□□□□□ -1.96
LINC01088-205ENST00000509088 CDH23Q9H251 3354 aa2.79□□□□□ -1.96
LINC01088-205ENST00000509088 CSPG4Q6UVK1 2322 aa2.79□□□□□ -1.96
LINC01088-205ENST00000509088 A0A096LPF7 62 aa2.79□□□□□ -1.96
LINC01088-205ENST00000509088 LINC00304Q8N9R0 145 aa2.79□□□□□ -1.96
LINC01088-205ENST00000509088 DMDP11532 3685 aa2.79□□□□□ -1.96
LINC01088-205ENST00000509088 TLN2Q9Y4G6 2542 aa2.78□□□□□ -1.96
LINC01088-205ENST00000509088 DEFB113Q30KQ7 82 aa2.78□□□□□ -1.96
LINC01088-205ENST00000509088 LUZP6Q538Z0 58 aa2.78□□□□□ -1.96
LINC01088-205ENST00000509088 SPINT4Q6UDR6 99 aa2.78□□□□□ -1.96
LINC01088-205ENST00000509088 COX6B2Q6YFQ2 88 aa2.78□□□□□ -1.96
LINC01088-205ENST00000509088 SPTBN4Q9H254 2564 aa2.77□□□□□ -1.97
LINC01088-205ENST00000509088 NBASA2RRP1 2371 aa2.77□□□□□ -1.97
LINC01088-205ENST00000509088 Q96NJ1 140 aa2.77□□□□□ -1.97
LINC01088-205ENST00000509088 LRBAP50851 2863 aa2.76□□□□□ -1.97
LINC01088-205ENST00000509088 DEFB124Q8NES8 71 aa2.76□□□□□ -1.97
LINC01088-205ENST00000509088 WDFY3Q8IZQ1 3526 aa2.76□□□□□ -1.97
LINC01088-205ENST00000509088 IGF2RP11717 2491 aa2.76□□□□□ -1.97
LINC01088-205ENST00000509088 ADGRG4Q8IZF6 3080 aa2.75□□□□□ -1.97
LINC01088-205ENST00000509088 APCP25054 2843 aa2.75□□□□□ -1.97
LINC01088-205ENST00000509088 MYO9AB2RTY4 2548 aa2.75□□□□□ -1.97
LINC01088-205ENST00000509088 A0A087WTM6 91 aa2.75□□□□□ -1.97
LINC01088-205ENST00000509088 A0A1B0GU33 70 aa2.74□□□□□ -1.97
LINC01088-205ENST00000509088 TENM2Q9NT68 2774 aa2.74□□□□□ -1.97
LINC01088-205ENST00000509088 DCHS2Q6V1P9 2916 aa2.74□□□□□ -1.97
LINC01088-205ENST00000509088 ANKRD11Q6UB99 2663 aaPredicted RBP2.74□□□□□ -1.97
LINC01088-205ENST00000509088 DMXL1Q9Y485 3027 aa2.73□□□□□ -1.97
LINC01088-205ENST00000509088 SSBP3-AS1Q7Z2R9 100 aa2.73□□□□□ -1.97
LINC01088-205ENST00000509088 CAMK2N1Q7Z7J9 78 aa2.73□□□□□ -1.97
LINC01088-205ENST00000509088 HRNRQ86YZ3 2850 aaPredicted RBP2.73□□□□□ -1.97
LINC01088-205ENST00000509088 DCHS1Q96JQ0 3298 aa2.73□□□□□ -1.97
LINC01088-205ENST00000509088 SPEGQ15772 3267 aa2.72□□□□□ -1.97
LINC01088-205ENST00000509088 ASH1LQ9NR48 2969 aaKnown RBP2.71□□□□□ -1.98
LINC01088-205ENST00000509088 KRTAP10-10P60014 251 aa2.71□□□□□ -1.98
LINC01088-205ENST00000509088 Q6ZSA8 131 aa2.71□□□□□ -1.98
LINC01088-205ENST00000509088 SMG1Q96Q15 3661 aaKnown RBP2.71□□□□□ -1.98
LINC01088-205ENST00000509088 CELSR3Q9NYQ7 3312 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms