RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 TENM4Q6N022 2769 aa0.5□□□□□ -2.33
DEPDC1B-204ENST00000509006 PIEZO1Q92508 2521 aa0.49□□□□□ -2.33
DEPDC1B-204ENST00000509006 NOTCH1P46531 2555 aa0.49□□□□□ -2.33
DEPDC1B-204ENST00000509006 FBN2P35556 2912 aa0.49□□□□□ -2.33
DEPDC1B-204ENST00000509006 NRXN3Q9Y4C0 1643 aa0.49□□□□□ -2.33
DEPDC1B-204ENST00000509006 CDC42BPAQ5VT25 1732 aa0.48□□□□□ -2.33
DEPDC1B-204ENST00000509006 WT1-ASQ06250 92 aa0.48□□□□□ -2.33
DEPDC1B-204ENST00000509006 TOMM5Q8N4H5 51 aa0.48□□□□□ -2.33
DEPDC1B-204ENST00000509006 LINC00308Q8TCZ7 52 aa0.48□□□□□ -2.33
DEPDC1B-204ENST00000509006 TIMM8BQ9Y5J9 83 aaPredicted RBP0.48□□□□□ -2.33
DEPDC1B-204ENST00000509006 AGLP35573 1532 aa0.48□□□□□ -2.33
DEPDC1B-204ENST00000509006 SMIM27A0A1W2PRY6 76 aa0.47□□□□□ -2.33
DEPDC1B-204ENST00000509006 KRTAP2-3P0C7H8 128 aa0.47□□□□□ -2.33
DEPDC1B-204ENST00000509006 KRTAP2-4Q9BYR9 128 aa0.47□□□□□ -2.33
DEPDC1B-204ENST00000509006 KRTAP2-1Q9BYU5 128 aa0.47□□□□□ -2.33
DEPDC1B-204ENST00000509006 GVINP1Q7Z2Y8 2422 aa0.47□□□□□ -2.33
DEPDC1B-204ENST00000509006 IQGAP2Q13576 1575 aa0.46□□□□□ -2.34
DEPDC1B-204ENST00000509006 LINC01546A6NGU7 62 aa0.46□□□□□ -2.34
DEPDC1B-204ENST00000509006 RPS27P42677 84 aaKnown RBP0.46□□□□□ -2.34
DEPDC1B-204ENST00000509006 PRLHP81277 87 aa0.46□□□□□ -2.34
DEPDC1B-204ENST00000509006 RPS27LQ71UM5 84 aaKnown RBP0.46□□□□□ -2.34
DEPDC1B-204ENST00000509006 NOP10Q9NPE3 64 aaKnown RBP0.46□□□□□ -2.34
DEPDC1B-204ENST00000509006 VWFP04275 2813 aa0.45□□□□□ -2.34
DEPDC1B-204ENST00000509006 TOGARAM1Q9Y4F4 1720 aa0.45□□□□□ -2.34
DEPDC1B-204ENST00000509006 PTPN13Q12923 2485 aa0.44□□□□□ -2.34
DEPDC1B-204ENST00000509006 DEFB106AQ8N104 65 aa0.44□□□□□ -2.34
DEPDC1B-204ENST00000509006 S4R3F8 94 aa0.44□□□□□ -2.34
DEPDC1B-204ENST00000509006 A0A1B0GUL6 1792 aa0.44□□□□□ -2.34
DEPDC1B-204ENST00000509006 UNC79Q9P2D8 2635 aa0.44□□□□□ -2.34
DEPDC1B-204ENST00000509006 SPTA1P02549 2419 aa0.44□□□□□ -2.34
DEPDC1B-204ENST00000509006 ABCA2Q9BZC7 2435 aa0.44□□□□□ -2.34
DEPDC1B-204ENST00000509006 PDE4DIPQ5VU43 2346 aa0.43□□□□□ -2.34
DEPDC1B-204ENST00000509006 TRANK1O15050 2925 aa0.43□□□□□ -2.34
DEPDC1B-204ENST00000509006 ZNF469Q96JG9 3925 aaPredicted RBP0.43□□□□□ -2.34
DEPDC1B-204ENST00000509006 ZFYVE26Q68DK2 2539 aa0.42□□□□□ -2.34
DEPDC1B-204ENST00000509006 ATRQ13535 2644 aa0.42□□□□□ -2.34
DEPDC1B-204ENST00000509006 KNL1Q8NG31 2342 aa0.42□□□□□ -2.34
DEPDC1B-204ENST00000509006 C9orf92A6NGG3 77 aa0.42□□□□□ -2.34
DEPDC1B-204ENST00000509006 SMIM2Q9BVW6 85 aa0.42□□□□□ -2.34
DEPDC1B-204ENST00000509006 LMO7Q8WWI1 1683 aa0.42□□□□□ -2.34
DEPDC1B-204ENST00000509006 FAM208AQ9UK61 1670 aaKnown RBP0.42□□□□□ -2.34
DEPDC1B-204ENST00000509006 FRAS1Q86XX4 4008 aa0.42□□□□□ -2.34
DEPDC1B-204ENST00000509006 CSPG4Q6UVK1 2322 aa0.42□□□□□ -2.34
DEPDC1B-204ENST00000509006 CHD6Q8TD26 2715 aa0.41□□□□□ -2.34
DEPDC1B-204ENST00000509006 OTOGQ6ZRI0 2925 aa0.41□□□□□ -2.34
DEPDC1B-204ENST00000509006 IGF2RP11717 2491 aa0.41□□□□□ -2.34
DEPDC1B-204ENST00000509006 DDX60Q8IY21 1712 aaKnown RBP0.41□□□□□ -2.34
DEPDC1B-204ENST00000509006 DEFB131AP59861 70 aa0.4□□□□□ -2.35
DEPDC1B-204ENST00000509006 KIF21BO75037 1637 aa0.39□□□□□ -2.35
DEPDC1B-204ENST00000509006 WFDC10BQ8IUB3 73 aa0.39□□□□□ -2.35
DEPDC1B-204ENST00000509006 REV3LO60673 3130 aa0.39□□□□□ -2.35
DEPDC1B-204ENST00000509006 CHD8Q9HCK8 2581 aa0.39□□□□□ -2.35
DEPDC1B-204ENST00000509006 TRPM2O94759 1503 aa0.38□□□□□ -2.35
DEPDC1B-204ENST00000509006 EP300Q09472 2414 aaPredicted RBP0.38□□□□□ -2.35
DEPDC1B-204ENST00000509006 PKD1L1Q8TDX9 2849 aa0.38□□□□□ -2.35
DEPDC1B-204ENST00000509006 MDN1Q9NU22 5596 aa0.38□□□□□ -2.35
DEPDC1B-204ENST00000509006 NCOR1O75376 2440 aa0.38□□□□□ -2.35
DEPDC1B-204ENST00000509006 NAV2Q8IVL1 2488 aa0.38□□□□□ -2.35
DEPDC1B-204ENST00000509006 MUC5BQ9HC84 5762 aaPredicted RBP0.37□□□□□ -2.35
DEPDC1B-204ENST00000509006 DSPP15924 2871 aaKnown RBP0.37□□□□□ -2.35
DEPDC1B-204ENST00000509006 IGLV5-48A0A075B6I7 105 aa0.37□□□□□ -2.35
DEPDC1B-204ENST00000509006 PRM1P04553 51 aa0.37□□□□□ -2.35
DEPDC1B-204ENST00000509006 SPRR2DP22532 72 aa0.37□□□□□ -2.35
DEPDC1B-204ENST00000509006 KAAG1Q9UBP8 84 aa0.37□□□□□ -2.35
DEPDC1B-204ENST00000509006 USP24Q9UPU5 2620 aa0.37□□□□□ -2.35
DEPDC1B-204ENST00000509006 CSMD3Q7Z407 3707 aa0.37□□□□□ -2.35
DEPDC1B-204ENST00000509006 A8MTW9 85 aa0.36□□□□□ -2.35
DEPDC1B-204ENST00000509006 M0QY20 66 aa0.36□□□□□ -2.35
DEPDC1B-204ENST00000509006 NDUFA1O15239 70 aa0.36□□□□□ -2.35
DEPDC1B-204ENST00000509006 KRTAP21-1Q3LI58 79 aa0.36□□□□□ -2.35
DEPDC1B-204ENST00000509006 NCOR2Q9Y618 2525 aa0.36□□□□□ -2.35
DEPDC1B-204ENST00000509006 IQGAP1P46940 1657 aa0.36□□□□□ -2.35
DEPDC1B-204ENST00000509006 ANK2Q01484 3957 aa0.35□□□□□ -2.35
DEPDC1B-204ENST00000509006 ATP7AQ04656 1500 aa0.35□□□□□ -2.35
DEPDC1B-204ENST00000509006 MMP24-AS1A0A0U1RRL7 71 aa0.35□□□□□ -2.35
DEPDC1B-204ENST00000509006 H3BNG1 76 aa0.35□□□□□ -2.35
DEPDC1B-204ENST00000509006 AKAP13Q12802 2813 aa0.35□□□□□ -2.35
DEPDC1B-204ENST00000509006 AHNAKQ09666 5890 aaKnown RBP0.34□□□□□ -2.35
DEPDC1B-204ENST00000509006 SPRR2BP35325 72 aa0.34□□□□□ -2.36
DEPDC1B-204ENST00000509006 TFF3Q07654 80 aa0.34□□□□□ -2.36
DEPDC1B-204ENST00000509006 SAMD9LQ8IVG5 1584 aa0.34□□□□□ -2.36
DEPDC1B-204ENST00000509006 HECTD1Q9ULT8 2610 aa0.34□□□□□ -2.36
DEPDC1B-204ENST00000509006 CLTCL1P53675 1640 aa0.34□□□□□ -2.36
DEPDC1B-204ENST00000509006 PRRC2CQ9Y520 2896 aaKnown RBP0.34□□□□□ -2.36
DEPDC1B-204ENST00000509006 HIVEP3Q5T1R4 2406 aa0.34□□□□□ -2.36
DEPDC1B-204ENST00000509006 CREBBPQ92793 2442 aa0.34□□□□□ -2.36
DEPDC1B-204ENST00000509006 IGSF10Q6WRI0 2623 aa0.34□□□□□ -2.36
DEPDC1B-204ENST00000509006 PCNX1Q96RV3 2341 aa0.33□□□□□ -2.36
DEPDC1B-204ENST00000509006 SETXQ7Z333 2677 aaKnown RBP0.33□□□□□ -2.36
DEPDC1B-204ENST00000509006 APC2O95996 2303 aa0.32□□□□□ -2.36
DEPDC1B-204ENST00000509006 M0QZ58 72 aa0.32□□□□□ -2.36
DEPDC1B-204ENST00000509006 UBR5O95071 2799 aaPredicted RBP0.32□□□□□ -2.36
DEPDC1B-204ENST00000509006 ALMS1Q8TCU4 4167 aa0.31□□□□□ -2.36
DEPDC1B-204ENST00000509006 TNXBP22105 4242 aa0.31□□□□□ -2.36
DEPDC1B-204ENST00000509006 ACANP16112 2415 aa0.31□□□□□ -2.36
DEPDC1B-204ENST00000509006 TNP1P09430 55 aa0.31□□□□□ -2.36
DEPDC1B-204ENST00000509006 TOP2AP11388 1531 aaKnown RBP0.31□□□□□ -2.36
DEPDC1B-204ENST00000509006 WNK1Q9H4A3 2382 aa0.31□□□□□ -2.36
DEPDC1B-204ENST00000509006 CEP290O15078 2479 aa0.3□□□□□ -2.36
DEPDC1B-204ENST00000509006 HUWE1Q7Z6Z7 4374 aaKnown RBP0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms