RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 FAM218AQ96MZ4 157 aa5.25□□□□□ -1.57
SCAMP1-202ENST00000506858 CBY1Q9Y3M2 126 aa5.25□□□□□ -1.57
SCAMP1-202ENST00000506858 LINC01600Q96MT4 127 aa5.24□□□□□ -1.57
SCAMP1-202ENST00000506858 TRBV7-6A0A0J9YX20 115 aa5.23□□□□□ -1.57
SCAMP1-202ENST00000506858 PSMB2P49721 201 aa5.23□□□□□ -1.57
SCAMP1-202ENST00000506858 VAMP3Q15836 100 aa5.23□□□□□ -1.57
SCAMP1-202ENST00000506858 LINC00575Q6W349 94 aa5.23□□□□□ -1.57
SCAMP1-202ENST00000506858 C3orf22Q8N5N4 141 aa5.23□□□□□ -1.57
SCAMP1-202ENST00000506858 CLEC2BQ92478 149 aa5.23□□□□□ -1.57
SCAMP1-202ENST00000506858 KRTAP29-1A8MX34 341 aaPredicted RBP5.23□□□□□ -1.57
SCAMP1-202ENST00000506858 KRTAP13-2Q52LG2 175 aa5.23□□□□□ -1.57
SCAMP1-202ENST00000506858 SNHG12Q9BXW3 62 aa5.23□□□□□ -1.57
SCAMP1-202ENST00000506858 DHRS4-AS1Q9P1J3 65 aa5.23□□□□□ -1.57
SCAMP1-202ENST00000506858 KRTAP10-8P60410 259 aa5.22□□□□□ -1.57
SCAMP1-202ENST00000506858 hADV29S1A0JD25 119 aa5.21□□□□□ -1.58
SCAMP1-202ENST00000506858 OXTP01178 125 aa5.21□□□□□ -1.58
SCAMP1-202ENST00000506858 LINC01547P58512 204 aaPredicted RBP5.2□□□□□ -1.58
SCAMP1-202ENST00000506858 Q6ZQY7 126 aa5.2□□□□□ -1.58
SCAMP1-202ENST00000506858 IGLV9-49A0A0B4J1Y8 123 aa5.19□□□□□ -1.58
SCAMP1-202ENST00000506858 SLC25A20O43772 301 aa5.19□□□□□ -1.58
SCAMP1-202ENST00000506858 SCGB1C2P0DMR2 95 aa5.19□□□□□ -1.58
SCAMP1-202ENST00000506858 CRYGAP11844 174 aa5.19□□□□□ -1.58
SCAMP1-202ENST00000506858 Q8N377 158 aa5.19□□□□□ -1.58
SCAMP1-202ENST00000506858 ZNF706Q9Y5V0 76 aaPredicted RBP5.19□□□□□ -1.58
SCAMP1-202ENST00000506858 A0A0G2JQZ4 141 aa5.19□□□□□ -1.58
SCAMP1-202ENST00000506858 H0YGX0 51 aa5.19□□□□□ -1.58
SCAMP1-202ENST00000506858 TAX1BP3O14907 124 aa5.19□□□□□ -1.58
SCAMP1-202ENST00000506858 LINC00483Q53H64 154 aa5.19□□□□□ -1.58
SCAMP1-202ENST00000506858 H3BUT2 72 aa5.18□□□□□ -1.58
SCAMP1-202ENST00000506858 TYMSOSQ8TAI1 123 aa5.18□□□□□ -1.58
SCAMP1-202ENST00000506858 MOBPQ13875 183 aa5.17□□□□□ -1.58
SCAMP1-202ENST00000506858 FAM229BQ4G0N7 80 aa5.17□□□□□ -1.58
SCAMP1-202ENST00000506858 SMIM29Q86T20 159 aa5.17□□□□□ -1.58
SCAMP1-202ENST00000506858 IGLV5-48A0A075B6I7 105 aa5.16□□□□□ -1.58
SCAMP1-202ENST00000506858 TEX49A0A1B0GTD5 131 aa5.16□□□□□ -1.58
SCAMP1-202ENST00000506858 COX6CP09669 75 aa5.15□□□□□ -1.58
SCAMP1-202ENST00000506858 SPRR1BP22528 89 aa5.15□□□□□ -1.58
SCAMP1-202ENST00000506858 C9orf153Q5TBE3 101 aa5.15□□□□□ -1.58
SCAMP1-202ENST00000506858 TCL1BO95988 128 aa5.15□□□□□ -1.59
SCAMP1-202ENST00000506858 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.15□□□□□ -1.59
SCAMP1-202ENST00000506858 Q8NBF4 154 aa5.15□□□□□ -1.59
SCAMP1-202ENST00000506858 A0A1B0GV72 72 aa5.14□□□□□ -1.59
SCAMP1-202ENST00000506858 LST1O00453 97 aa5.13□□□□□ -1.59
SCAMP1-202ENST00000506858 LAMTOR3Q9UHA4 124 aa5.13□□□□□ -1.59
SCAMP1-202ENST00000506858 FABP2P12104 132 aa5.12□□□□□ -1.59
SCAMP1-202ENST00000506858 COL5A1-AS1Q5SY13 56 aa5.12□□□□□ -1.59
SCAMP1-202ENST00000506858 HRCT1Q6UXD1 115 aa5.12□□□□□ -1.59
SCAMP1-202ENST00000506858 CDIP1Q9H305 208 aa5.12□□□□□ -1.59
SCAMP1-202ENST00000506858 LINC00304Q8N9R0 145 aa5.12□□□□□ -1.59
SCAMP1-202ENST00000506858 A0A1W2PPM0 123 aa5.11□□□□□ -1.59
SCAMP1-202ENST00000506858 SNCGO76070 127 aa5.11□□□□□ -1.59
SCAMP1-202ENST00000506858 DNAL4O96015 105 aa5.11□□□□□ -1.59
SCAMP1-202ENST00000506858 MTURNQ8N3F0 131 aa5.11□□□□□ -1.59
SCAMP1-202ENST00000506858 A0A1B0GX51 115 aa5.1□□□□□ -1.59
SCAMP1-202ENST00000506858 TRACP01848 142 aa5.09□□□□□ -1.59
SCAMP1-202ENST00000506858 BAALC-AS2P0C853 105 aa5.09□□□□□ -1.59
SCAMP1-202ENST00000506858 ATXN8Q156A1 80 aa5.09□□□□□ -1.59
SCAMP1-202ENST00000506858 ORMDL1Q9P0S3 153 aa5.09□□□□□ -1.59
SCAMP1-202ENST00000506858 HMCN2Q8NDA2 5059 aa5.09□□□□□ -1.59
SCAMP1-202ENST00000506858 NDUFV3P56181 108 aaKnown RBP5.08□□□□□ -1.6
SCAMP1-202ENST00000506858 OCIAD2Q56VL3 154 aa5.08□□□□□ -1.6
SCAMP1-202ENST00000506858 SSBP3-AS1Q7Z2R9 100 aa5.08□□□□□ -1.6
SCAMP1-202ENST00000506858 RETNLBQ9BQ08 111 aa5.08□□□□□ -1.6
SCAMP1-202ENST00000506858 KRTAP3-1Q9BYR8 98 aa5.08□□□□□ -1.6
SCAMP1-202ENST00000506858 C9JAW5 83 aa5.08□□□□□ -1.6
SCAMP1-202ENST00000506858 F8WEM9 126 aa5.08□□□□□ -1.6
SCAMP1-202ENST00000506858 H3BMG7 143 aa5.08□□□□□ -1.6
SCAMP1-202ENST00000506858 SPCS1Q9Y6A9 102 aa5.07□□□□□ -1.6
SCAMP1-202ENST00000506858 IGFL1Q6UW32 110 aa5.06□□□□□ -1.6
SCAMP1-202ENST00000506858 LPAP08519 4548 aa5.06□□□□□ -1.6
SCAMP1-202ENST00000506858 LYRM7Q5U5X0 104 aa5.05□□□□□ -1.6
SCAMP1-202ENST00000506858 PPDPFLQ8WWR9 84 aa5.05□□□□□ -1.6
SCAMP1-202ENST00000506858 TRBV20-1A0A075B6N2 111 aa5.05□□□□□ -1.6
SCAMP1-202ENST00000506858 TMEM256-PLSCR3K7ERE1 68 aa5.05□□□□□ -1.6
SCAMP1-202ENST00000506858 IGLV8-61A0A075B6I0 122 aa5.04□□□□□ -1.6
SCAMP1-202ENST00000506858 ANKRD29Q8N6D5 301 aa5.04□□□□□ -1.6
SCAMP1-202ENST00000506858 LRP2P98164 4655 aa5.03□□□□□ -1.6
SCAMP1-202ENST00000506858 UBE2V1Q13404 147 aa5.03□□□□□ -1.6
SCAMP1-202ENST00000506858 SPAG11AQ6PDA7 123 aa5.03□□□□□ -1.6
SCAMP1-202ENST00000506858 SPINK1P00995 79 aa5.02□□□□□ -1.61
SCAMP1-202ENST00000506858 PRR4Q16378 134 aa5.02□□□□□ -1.61
SCAMP1-202ENST00000506858 A0A1W2PNM2 257 aa5.01□□□□□ -1.61
SCAMP1-202ENST00000506858 K7EP34 96 aa5.01□□□□□ -1.61
SCAMP1-202ENST00000506858 Q6JHZ5 121 aa5.01□□□□□ -1.61
SCAMP1-202ENST00000506858 A0A1B0GV90 55 aa4.99□□□□□ -1.61
SCAMP1-202ENST00000506858 H3BQ85 93 aa4.99□□□□□ -1.61
SCAMP1-202ENST00000506858 RBM3P98179 157 aaKnown RBP4.99□□□□□ -1.61
SCAMP1-202ENST00000506858 VPS25Q9BRG1 176 aa4.99□□□□□ -1.61
SCAMP1-202ENST00000506858 PRO0461Q9UI25 63 aa4.99□□□□□ -1.61
SCAMP1-202ENST00000506858 TRBV7-7A0A0K0K1E9 115 aa4.98□□□□□ -1.61
SCAMP1-202ENST00000506858 CD164Q04900 197 aa4.98□□□□□ -1.61
SCAMP1-202ENST00000506858 C14orf132Q9NPU4 83 aa4.98□□□□□ -1.61
SCAMP1-202ENST00000506858 A0A087WSZ3 146 aa4.97□□□□□ -1.61
SCAMP1-202ENST00000506858 TRBV7-4A0A0J9YYF1 115 aa4.97□□□□□ -1.61
SCAMP1-202ENST00000506858 H3BT86 120 aa4.97□□□□□ -1.61
SCAMP1-202ENST00000506858 CCKP06307 115 aa4.97□□□□□ -1.61
SCAMP1-202ENST00000506858 C1orf195Q5TG92 126 aa4.96□□□□□ -1.62
SCAMP1-202ENST00000506858 GTF2H5Q6ZYL4 71 aa4.96□□□□□ -1.62
SCAMP1-202ENST00000506858 TEN1Q86WV5 123 aa4.96□□□□□ -1.62
SCAMP1-202ENST00000506858 DSCR8Q96T75 97 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms