RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 SNHG12Q9BXW3 62 aa7.47□□□□□ -1.21
TCOF1-210ENST00000506767 SCGB1C2P0DMR2 95 aa7.46□□□□□ -1.22
TCOF1-210ENST00000506767 LINC00304Q8N9R0 145 aa7.46□□□□□ -1.22
TCOF1-210ENST00000506767 Q8NBF4 154 aa7.45□□□□□ -1.22
TCOF1-210ENST00000506767 NAA38Q9BRA0 125 aaKnown RBP7.45□□□□□ -1.22
TCOF1-210ENST00000506767 LST1O00453 97 aa7.44□□□□□ -1.22
TCOF1-210ENST00000506767 TAX1BP3O14907 124 aa7.44□□□□□ -1.22
TCOF1-210ENST00000506767 C9orf153Q5TBE3 101 aa7.44□□□□□ -1.22
TCOF1-210ENST00000506767 TRACP01848 142 aa7.43□□□□□ -1.22
TCOF1-210ENST00000506767 SPAG11AQ6PDA7 123 aa7.43□□□□□ -1.22
TCOF1-210ENST00000506767 C9orf118A6NHY6 69 aa7.42□□□□□ -1.22
TCOF1-210ENST00000506767 PCP4L1A6NKN8 68 aa7.42□□□□□ -1.22
TCOF1-210ENST00000506767 GHRHP01286 108 aa7.42□□□□□ -1.22
TCOF1-210ENST00000506767 H3BUT2 72 aa7.41□□□□□ -1.22
TCOF1-210ENST00000506767 DNAL4O96015 105 aa7.41□□□□□ -1.22
TCOF1-210ENST00000506767 IGLV8-61A0A075B6I0 122 aa7.4□□□□□ -1.22
TCOF1-210ENST00000506767 TCL1BO95988 128 aa7.4□□□□□ -1.22
TCOF1-210ENST00000506767 ORMDL1Q9P0S3 153 aa7.4□□□□□ -1.22
TCOF1-210ENST00000506767 H3BQ85 93 aa7.39□□□□□ -1.23
TCOF1-210ENST00000506767 SPINK1P00995 79 aa7.39□□□□□ -1.23
TCOF1-210ENST00000506767 C4orf48Q5BLP8 95 aa7.39□□□□□ -1.23
TCOF1-210ENST00000506767 HMCN2Q8NDA2 5059 aa7.39□□□□□ -1.23
TCOF1-210ENST00000506767 F8WEM9 126 aa7.38□□□□□ -1.23
TCOF1-210ENST00000506767 NDUFV3P56181 108 aaKnown RBP7.38□□□□□ -1.23
TCOF1-210ENST00000506767 ATXN8Q156A1 80 aa7.38□□□□□ -1.23
TCOF1-210ENST00000506767 COL5A1-AS1Q5SY13 56 aa7.38□□□□□ -1.23
TCOF1-210ENST00000506767 LYRM7Q5U5X0 104 aa7.38□□□□□ -1.23
TCOF1-210ENST00000506767 TRBV20-1A0A075B6N2 111 aa7.37□□□□□ -1.23
TCOF1-210ENST00000506767 A0A1W2PPM0 123 aa7.37□□□□□ -1.23
TCOF1-210ENST00000506767 TMEM256-PLSCR3K7ERE1 68 aa7.37□□□□□ -1.23
TCOF1-210ENST00000506767 FABP2P12104 132 aa7.37□□□□□ -1.23
TCOF1-210ENST00000506767 RPS29P62273 56 aaKnown RBP7.37□□□□□ -1.23
TCOF1-210ENST00000506767 CD164Q04900 197 aa7.36□□□□□ -1.23
TCOF1-210ENST00000506767 A0A0G2JQZ4 141 aa7.35□□□□□ -1.23
TCOF1-210ENST00000506767 Q6JHZ5 121 aa7.35□□□□□ -1.23
TCOF1-210ENST00000506767 UBR4Q5T4S7 5183 aa7.35□□□□□ -1.23
TCOF1-210ENST00000506767 UBE2V1Q13404 147 aa7.34□□□□□ -1.23
TCOF1-210ENST00000506767 IGFL1Q6UW32 110 aa7.34□□□□□ -1.23
TCOF1-210ENST00000506767 H3BMG7 143 aa7.33□□□□□ -1.24
TCOF1-210ENST00000506767 BAALC-AS2P0C853 105 aa7.33□□□□□ -1.24
TCOF1-210ENST00000506767 HRCT1Q6UXD1 115 aa7.32□□□□□ -1.24
TCOF1-210ENST00000506767 Q5XG85 94 aa7.29□□□□□ -1.24
TCOF1-210ENST00000506767 RETNLBQ9BQ08 111 aa7.29□□□□□ -1.24
TCOF1-210ENST00000506767 Q6Q795 121 aa7.28□□□□□ -1.24
TCOF1-210ENST00000506767 ANKRD29Q8N6D5 301 aa7.28□□□□□ -1.24
TCOF1-210ENST00000506767 LIMD2Q9BT23 127 aa7.28□□□□□ -1.24
TCOF1-210ENST00000506767 SPCS1Q9Y6A9 102 aa7.28□□□□□ -1.24
TCOF1-210ENST00000506767 C9JAW5 83 aa7.27□□□□□ -1.25
TCOF1-210ENST00000506767 TRBV7-7A0A0K0K1E9 115 aa7.26□□□□□ -1.25
TCOF1-210ENST00000506767 PRR4Q16378 134 aa7.26□□□□□ -1.25
TCOF1-210ENST00000506767 TEN1Q86WV5 123 aa7.25□□□□□ -1.25
TCOF1-210ENST00000506767 TRBV7-4A0A0J9YYF1 115 aa7.24□□□□□ -1.25
TCOF1-210ENST00000506767 A0A1B0GV72 72 aa7.24□□□□□ -1.25
TCOF1-210ENST00000506767 A0A1W2PNM2 257 aa7.24□□□□□ -1.25
TCOF1-210ENST00000506767 H3BT86 120 aa7.24□□□□□ -1.25
TCOF1-210ENST00000506767 RBM3P98179 157 aaKnown RBP7.24□□□□□ -1.25
TCOF1-210ENST00000506767 FP248Q71RG6 208 aaPredicted RBP7.24□□□□□ -1.25
TCOF1-210ENST00000506767 K7EP34 96 aa7.23□□□□□ -1.25
TCOF1-210ENST00000506767 JMJD7-PLA2G4BH0Y9G9 81 aa7.22□□□□□ -1.25
TCOF1-210ENST00000506767 ASB16-AS1Q495Z4 193 aa7.22□□□□□ -1.25
TCOF1-210ENST00000506767 OBSCN-AS1Q96MR7 158 aa7.22□□□□□ -1.25
TCOF1-210ENST00000506767 IGLV7-46A0A075B6I9 117 aa7.21□□□□□ -1.26
TCOF1-210ENST00000506767 MTURNQ8N3F0 131 aa7.21□□□□□ -1.26
TCOF1-210ENST00000506767 LRP2P98164 4655 aa7.21□□□□□ -1.26
TCOF1-210ENST00000506767 C1orf195Q5TG92 126 aa7.2□□□□□ -1.26
TCOF1-210ENST00000506767 DSCR8Q96T75 97 aa7.2□□□□□ -1.26
TCOF1-210ENST00000506767 CCKP06307 115 aa7.19□□□□□ -1.26
TCOF1-210ENST00000506767 SMCPP49901 116 aaPredicted RBP7.19□□□□□ -1.26
TCOF1-210ENST00000506767 PRO0461Q9UI25 63 aa7.19□□□□□ -1.26
TCOF1-210ENST00000506767 LPAP08519 4548 aa7.18□□□□□ -1.26
TCOF1-210ENST00000506767 GTF2H5Q6ZYL4 71 aa7.18□□□□□ -1.26
TCOF1-210ENST00000506767 A0A087WSZ3 146 aa7.17□□□□□ -1.26
TCOF1-210ENST00000506767 LOC110117498A0A087WWA1 95 aa7.17□□□□□ -1.26
TCOF1-210ENST00000506767 TPRXLQ17RH7 258 aa7.17□□□□□ -1.26
TCOF1-210ENST00000506767 Q6ZQT0 140 aa7.16□□□□□ -1.26
TCOF1-210ENST00000506767 SS18L2Q9UHA2 77 aa7.16□□□□□ -1.26
TCOF1-210ENST00000506767 PDE6GP18545 87 aa7.15□□□□□ -1.26
TCOF1-210ENST00000506767 C14orf132Q9NPU4 83 aa7.15□□□□□ -1.26
TCOF1-210ENST00000506767 KRTAP13-3Q3SY46 172 aa7.14□□□□□ -1.27
TCOF1-210ENST00000506767 VPS25Q9BRG1 176 aa7.13□□□□□ -1.27
TCOF1-210ENST00000506767 Q96NJ1 140 aa7.12□□□□□ -1.27
TCOF1-210ENST00000506767 A0A1B0GW54 56 aa7.11□□□□□ -1.27
TCOF1-210ENST00000506767 F8W1H4 67 aa7.11□□□□□ -1.27
TCOF1-210ENST00000506767 C21orf62-AS1Q17RA5 79 aa7.11□□□□□ -1.27
TCOF1-210ENST00000506767 RNF213Q63HN8 5207 aa7.1□□□□□ -1.27
TCOF1-210ENST00000506767 LINC00472Q9H8W2 130 aa7.08□□□□□ -1.28
TCOF1-210ENST00000506767 CDIP1Q9H305 208 aa7.07□□□□□ -1.28
TCOF1-210ENST00000506767 A0A1B0GV90 55 aa7.06□□□□□ -1.28
TCOF1-210ENST00000506767 C9orf92A6NGG3 77 aa7.03□□□□□ -1.28
TCOF1-210ENST00000506767 ETDBQ3ZM63 59 aa7.03□□□□□ -1.28
TCOF1-210ENST00000506767 XP32Q5T750 250 aa7.03□□□□□ -1.28
TCOF1-210ENST00000506767 IGKV4-1P06312 121 aa7.02□□□□□ -1.29
TCOF1-210ENST00000506767 DEFB116Q30KQ4 102 aa7.02□□□□□ -1.29
TCOF1-210ENST00000506767 MUC17Q685J3 4493 aa7.01□□□□□ -1.29
TCOF1-210ENST00000506767 SIGMAR1Q99720 223 aa6.99□□□□□ -1.29
TCOF1-210ENST00000506767 J3KT08 172 aa6.98□□□□□ -1.29
TCOF1-210ENST00000506767 NREPQ16612 68 aa6.98□□□□□ -1.29
TCOF1-210ENST00000506767 LINC00846Q9NV44 126 aa6.94□□□□□ -1.3
TCOF1-210ENST00000506767 A0A1B0GVX0 72 aa6.93□□□□□ -1.3
TCOF1-210ENST00000506767 Q6ZVQ6 151 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms