RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 CRIPTQ9P021 101 aa-0.12□□□□□ -2.43
GYPB-207ENST00000506679 KNL1Q8NG31 2342 aa-0.12□□□□□ -2.43
GYPB-207ENST00000506679 URB1O60287 2271 aaKnown RBP-0.12□□□□□ -2.43
GYPB-207ENST00000506679 I3L3M4 83 aa-0.13□□□□□ -2.43
GYPB-207ENST00000506679 DEFB107AQ8IZN7 70 aa-0.13□□□□□ -2.43
GYPB-207ENST00000506679 MYH4Q9Y623 1939 aa-0.13□□□□□ -2.43
GYPB-207ENST00000506679 NESP48681 1621 aa-0.13□□□□□ -2.43
GYPB-207ENST00000506679 EPRSP07814 1512 aaKnown RBP-0.13□□□□□ -2.43
GYPB-207ENST00000506679 DNAH8Q96JB1 4490 aa-0.13□□□□□ -2.43
GYPB-207ENST00000506679 DNAJC13O75165 2243 aa-0.14□□□□□ -2.43
GYPB-207ENST00000506679 NKTRP30414 1462 aaKnown RBP-0.14□□□□□ -2.43
GYPB-207ENST00000506679 VPS13DQ5THJ4 4388 aa-0.14□□□□□ -2.43
GYPB-207ENST00000506679 CPSF4LA6NMK7 179 aaKnown RBP-0.14□□□□□ -2.43
GYPB-207ENST00000506679 COL5A1-AS1Q5SY13 56 aa-0.14□□□□□ -2.43
GYPB-207ENST00000506679 ZNF720Q7Z2F6 126 aa-0.14□□□□□ -2.43
GYPB-207ENST00000506679 ANKRD26Q9UPS8 1709 aa-0.14□□□□□ -2.43
GYPB-207ENST00000506679 CRYBG1Q9Y4K1 1723 aa-0.14□□□□□ -2.43
GYPB-207ENST00000506679 CUX1P39880 1505 aa-0.14□□□□□ -2.43
GYPB-207ENST00000506679 VPS8Q8N3P4 1428 aa-0.14□□□□□ -2.43
GYPB-207ENST00000506679 AKAP12Q02952 1782 aa-0.14□□□□□ -2.43
GYPB-207ENST00000506679 FANCAO15360 1455 aa-0.15□□□□□ -2.43
GYPB-207ENST00000506679 UQCRHLA0A096LP55 91 aa-0.15□□□□□ -2.43
GYPB-207ENST00000506679 TRBV7-7A0A0K0K1E9 115 aa-0.15□□□□□ -2.43
GYPB-207ENST00000506679 M0R143 59 aa-0.15□□□□□ -2.43
GYPB-207ENST00000506679 M0R2T5 61 aa-0.15□□□□□ -2.43
GYPB-207ENST00000506679 ETDBQ3ZM63 59 aa-0.15□□□□□ -2.43
GYPB-207ENST00000506679 APLNQ9ULZ1 77 aa-0.15□□□□□ -2.43
GYPB-207ENST00000506679 ADAMTS12P58397 1594 aa-0.15□□□□□ -2.43
GYPB-207ENST00000506679 SAMD9Q5K651 1589 aa-0.15□□□□□ -2.43
GYPB-207ENST00000506679 PKD1L3Q7Z443 1732 aa-0.16□□□□□ -2.43
GYPB-207ENST00000506679 NRXN1Q9ULB1 1477 aa-0.16□□□□□ -2.43
GYPB-207ENST00000506679 ALKQ9UM73 1620 aa-0.16□□□□□ -2.43
GYPB-207ENST00000506679 CCL22O00626 93 aa-0.16□□□□□ -2.44
GYPB-207ENST00000506679 SMR3BP02814 79 aaPredicted RBP-0.16□□□□□ -2.44
GYPB-207ENST00000506679 S100A8P05109 93 aa-0.16□□□□□ -2.44
GYPB-207ENST00000506679 DEFA5Q01523 94 aa-0.16□□□□□ -2.44
GYPB-207ENST00000506679 RGPD2P0DJD1 1756 aa-0.17□□□□□ -2.44
GYPB-207ENST00000506679 CLASP1Q7Z460 1538 aa-0.17□□□□□ -2.44
GYPB-207ENST00000506679 D6R8Y8 96 aa-0.17□□□□□ -2.44
GYPB-207ENST00000506679 LEPROTL1O95214 131 aa-0.17□□□□□ -2.44
GYPB-207ENST00000506679 FAUP35544 74 aaKnown RBP-0.17□□□□□ -2.44
GYPB-207ENST00000506679 NWD1Q149M9 1564 aa-0.17□□□□□ -2.44
GYPB-207ENST00000506679 NCMAPQ5T1S8 102 aa-0.17□□□□□ -2.44
GYPB-207ENST00000506679 MUSTN1Q8IVN3 82 aa-0.17□□□□□ -2.44
GYPB-207ENST00000506679 BCORQ6W2J9 1755 aa-0.17□□□□□ -2.44
GYPB-207ENST00000506679 TMEM131LA2VDJ0 1609 aa-0.17□□□□□ -2.44
GYPB-207ENST00000506679 LRRC7Q96NW7 1537 aa-0.18□□□□□ -2.44
GYPB-207ENST00000506679 QSER1Q2KHR3 1735 aa-0.18□□□□□ -2.44
GYPB-207ENST00000506679 CLIP1P30622 1438 aa-0.18□□□□□ -2.44
GYPB-207ENST00000506679 SPTY2D1-AS1A0A0U1RR47 76 aa-0.18□□□□□ -2.44
GYPB-207ENST00000506679 H0YGG7 62 aa-0.18□□□□□ -2.44
GYPB-207ENST00000506679 GYPAP02724 150 aa-0.18□□□□□ -2.44
GYPB-207ENST00000506679 MRPL34Q9BQ48 92 aaKnown RBP-0.18□□□□□ -2.44
GYPB-207ENST00000506679 ATP10BO94823 1461 aa-0.18□□□□□ -2.44
GYPB-207ENST00000506679 UBR3Q6ZT12 1888 aa-0.18□□□□□ -2.44
GYPB-207ENST00000506679 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.19□□□□□ -2.44
GYPB-207ENST00000506679 F8WEM9 126 aa-0.19□□□□□ -2.44
GYPB-207ENST00000506679 SMIM11AP58511 58 aa-0.19□□□□□ -2.44
GYPB-207ENST00000506679 PKIAP61925 76 aa-0.19□□□□□ -2.44
GYPB-207ENST00000506679 DEFB112Q30KQ8 113 aa-0.19□□□□□ -2.44
GYPB-207ENST00000506679 H1FX-AS1Q4G0G2 97 aa-0.19□□□□□ -2.44
GYPB-207ENST00000506679 PSENENQ9NZ42 101 aa-0.19□□□□□ -2.44
GYPB-207ENST00000506679 ABCC10Q5T3U5 1492 aa-0.19□□□□□ -2.44
GYPB-207ENST00000506679 RALGAPBQ86X10 1494 aa-0.19□□□□□ -2.44
GYPB-207ENST00000506679 RGPD4Q7Z3J3 1758 aa-0.19□□□□□ -2.44
GYPB-207ENST00000506679 MYO3AQ8NEV4 1616 aa-0.2□□□□□ -2.44
GYPB-207ENST00000506679 TROQ12816 1431 aaPredicted RBP-0.2□□□□□ -2.44
GYPB-207ENST00000506679 K7EP34 96 aa-0.2□□□□□ -2.44
GYPB-207ENST00000506679 DEFB135Q30KP9 77 aa-0.2□□□□□ -2.44
GYPB-207ENST00000506679 UBE2D4Q9Y2X8 147 aa-0.2□□□□□ -2.44
GYPB-207ENST00000506679 EFCAB6Q5THR3 1501 aa-0.2□□□□□ -2.44
GYPB-207ENST00000506679 MAP3K4Q9Y6R4 1608 aa-0.2□□□□□ -2.44
GYPB-207ENST00000506679 RGPD3A6NKT7 1758 aaPredicted RBP-0.21□□□□□ -2.44
GYPB-207ENST00000506679 H3BNG1 76 aa-0.21□□□□□ -2.44
GYPB-207ENST00000506679 IGLC2P0DOY2 106 aa-0.21□□□□□ -2.44
GYPB-207ENST00000506679 IGLC3P0DOY3 106 aa-0.21□□□□□ -2.44
GYPB-207ENST00000506679 KRTAP6-2Q3LI66 62 aa-0.21□□□□□ -2.44
GYPB-207ENST00000506679 C9orf62Q8N4C0 152 aa-0.21□□□□□ -2.44
GYPB-207ENST00000506679 CDKN2A-AS1Q9UH64 79 aa-0.21□□□□□ -2.44
GYPB-207ENST00000506679 ANKRD50Q9ULJ7 1429 aa-0.21□□□□□ -2.44
GYPB-207ENST00000506679 RGPD8O14715 1765 aaPredicted RBP-0.22□□□□□ -2.44
GYPB-207ENST00000506679 RGPD5Q99666 1765 aa-0.22□□□□□ -2.44
GYPB-207ENST00000506679 ASXL1Q8IXJ9 1541 aa-0.22□□□□□ -2.44
GYPB-207ENST00000506679 HMGN2P05204 90 aaKnown RBP-0.22□□□□□ -2.44
GYPB-207ENST00000506679 PEA15Q15121 130 aa-0.22□□□□□ -2.44
GYPB-207ENST00000506679 NMSQ5H8A3 153 aa-0.22□□□□□ -2.44
GYPB-207ENST00000506679 HEPN1Q6WQI6 88 aa-0.22□□□□□ -2.44
GYPB-207ENST00000506679 SNHG12Q9BXW3 62 aa-0.22□□□□□ -2.44
GYPB-207ENST00000506679 HIGD1BQ9P298 99 aa-0.22□□□□□ -2.44
GYPB-207ENST00000506679 TIAM2Q8IVF5 1701 aa-0.22□□□□□ -2.44
GYPB-207ENST00000506679 UBR1Q8IWV7 1749 aa-0.22□□□□□ -2.44
GYPB-207ENST00000506679 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.23□□□□□ -2.45
GYPB-207ENST00000506679 PREX1Q8TCU6 1659 aa-0.23□□□□□ -2.45
GYPB-207ENST00000506679 DEFB1P60022 68 aa-0.23□□□□□ -2.45
GYPB-207ENST00000506679 RPL38P63173 70 aaKnown RBP-0.23□□□□□ -2.45
GYPB-207ENST00000506679 PLGLAQ15195 96 aa-0.23□□□□□ -2.45
GYPB-207ENST00000506679 CCNB3Q8WWL7 1395 aa-0.23□□□□□ -2.45
GYPB-207ENST00000506679 CEP162Q5TB80 1403 aa-0.23□□□□□ -2.45
GYPB-207ENST00000506679 ZNF831Q5JPB2 1677 aa-0.24□□□□□ -2.45
GYPB-207ENST00000506679 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms