RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 DEPDC5O75140 1603 aa0.73□□□□□ -2.29
TRAPPC13-206ENST00000504751 CSPG4Q6UVK1 2322 aa0.73□□□□□ -2.29
TRAPPC13-206ENST00000504751 SERF2P84101 59 aa0.72□□□□□ -2.29
TRAPPC13-206ENST00000504751 SPINK6Q6UWN8 80 aa0.72□□□□□ -2.29
TRAPPC13-206ENST00000504751 PDE4DIPQ5VU43 2346 aa0.71□□□□□ -2.3
TRAPPC13-206ENST00000504751 CELSR1Q9NYQ6 3014 aa0.71□□□□□ -2.3
TRAPPC13-206ENST00000504751 IAPPP10997 89 aa0.71□□□□□ -2.3
TRAPPC13-206ENST00000504751 CDC42BPAQ5VT25 1732 aa0.7□□□□□ -2.3
TRAPPC13-206ENST00000504751 MINOS1Q5TGZ0 78 aa0.7□□□□□ -2.3
TRAPPC13-206ENST00000504751 CMC2Q9NRP2 79 aa0.7□□□□□ -2.3
TRAPPC13-206ENST00000504751 KIAA0586Q9BVV6 1533 aa0.69□□□□□ -2.3
TRAPPC13-206ENST00000504751 FAT2Q9NYQ8 4349 aa0.69□□□□□ -2.3
TRAPPC13-206ENST00000504751 ABCC8Q09428 1581 aa0.69□□□□□ -2.3
TRAPPC13-206ENST00000504751 DSPP15924 2871 aaKnown RBP0.69□□□□□ -2.3
TRAPPC13-206ENST00000504751 PLNP26678 52 aa0.68□□□□□ -2.3
TRAPPC13-206ENST00000504751 RPS27P42677 84 aaKnown RBP0.68□□□□□ -2.3
TRAPPC13-206ENST00000504751 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
TRAPPC13-206ENST00000504751 RPS27LQ71UM5 84 aaKnown RBP0.68□□□□□ -2.3
TRAPPC13-206ENST00000504751 IGF2RP11717 2491 aa0.67□□□□□ -2.3
TRAPPC13-206ENST00000504751 OTOGQ6ZRI0 2925 aa0.67□□□□□ -2.3
TRAPPC13-206ENST00000504751 LINC00308Q8TCZ7 52 aa0.67□□□□□ -2.3
TRAPPC13-206ENST00000504751 CHD6Q8TD26 2715 aa0.67□□□□□ -2.3
TRAPPC13-206ENST00000504751 TENM4Q6N022 2769 aa0.67□□□□□ -2.3
TRAPPC13-206ENST00000504751 DDX60Q8IY21 1712 aaKnown RBP0.67□□□□□ -2.3
TRAPPC13-206ENST00000504751 ATRQ13535 2644 aa0.66□□□□□ -2.3
TRAPPC13-206ENST00000504751 SMIM27A0A1W2PRY6 76 aa0.66□□□□□ -2.3
TRAPPC13-206ENST00000504751 H0YGX0 51 aa0.66□□□□□ -2.3
TRAPPC13-206ENST00000504751 C6orf48Q9UBA6 75 aa0.66□□□□□ -2.3
TRAPPC13-206ENST00000504751 TIMM8BQ9Y5J9 83 aaPredicted RBP0.66□□□□□ -2.3
TRAPPC13-206ENST00000504751 IQGAP1P46940 1657 aa0.65□□□□□ -2.3
TRAPPC13-206ENST00000504751 PIEZO1Q92508 2521 aa0.65□□□□□ -2.31
TRAPPC13-206ENST00000504751 PCNX1Q96RV3 2341 aa0.65□□□□□ -2.31
TRAPPC13-206ENST00000504751 ABCA2Q9BZC7 2435 aa0.64□□□□□ -2.31
TRAPPC13-206ENST00000504751 TOMM5Q8N4H5 51 aa0.64□□□□□ -2.31
TRAPPC13-206ENST00000504751 TRANK1O15050 2925 aa0.64□□□□□ -2.31
TRAPPC13-206ENST00000504751 LINC01546A6NGU7 62 aa0.63□□□□□ -2.31
TRAPPC13-206ENST00000504751 SPINK1P00995 79 aa0.63□□□□□ -2.31
TRAPPC13-206ENST00000504751 TFF3Q07654 80 aa0.63□□□□□ -2.31
TRAPPC13-206ENST00000504751 ABRACLQ9P1F3 81 aa0.63□□□□□ -2.31
TRAPPC13-206ENST00000504751 LMO7Q8WWI1 1683 aa0.62□□□□□ -2.31
TRAPPC13-206ENST00000504751 LYSTQ99698 3801 aa0.62□□□□□ -2.31
TRAPPC13-206ENST00000504751 TMEM167BQ9NRX6 74 aa0.62□□□□□ -2.31
TRAPPC13-206ENST00000504751 SPTA1P02549 2419 aa0.62□□□□□ -2.31
TRAPPC13-206ENST00000504751 PRKDCP78527 4128 aaKnown RBP0.62□□□□□ -2.31
TRAPPC13-206ENST00000504751 TOP2AP11388 1531 aaKnown RBP0.61□□□□□ -2.31
TRAPPC13-206ENST00000504751 PRM1P04553 51 aa0.61□□□□□ -2.31
TRAPPC13-206ENST00000504751 WT1-ASQ06250 92 aa0.61□□□□□ -2.31
TRAPPC13-206ENST00000504751 MUC5BQ9HC84 5762 aaPredicted RBP0.6□□□□□ -2.31
TRAPPC13-206ENST00000504751 S4R3F8 94 aa0.6□□□□□ -2.31
TRAPPC13-206ENST00000504751 U3KQA8 63 aa0.6□□□□□ -2.31
TRAPPC13-206ENST00000504751 AHNAKQ09666 5890 aaKnown RBP0.6□□□□□ -2.31
TRAPPC13-206ENST00000504751 IQGAP2Q13576 1575 aa0.59□□□□□ -2.31
TRAPPC13-206ENST00000504751 TNXBP22105 4242 aa0.59□□□□□ -2.32
TRAPPC13-206ENST00000504751 PKD1L1Q8TDX9 2849 aa0.58□□□□□ -2.32
TRAPPC13-206ENST00000504751 PRRC2CQ9Y520 2896 aaKnown RBP0.58□□□□□ -2.32
TRAPPC13-206ENST00000504751 PHGR1C9JFL3 82 aa0.57□□□□□ -2.32
TRAPPC13-206ENST00000504751 CHD8Q9HCK8 2581 aa0.57□□□□□ -2.32
TRAPPC13-206ENST00000504751 NFAT5O94916 1531 aa0.57□□□□□ -2.32
TRAPPC13-206ENST00000504751 FAM208AQ9UK61 1670 aaKnown RBP0.56□□□□□ -2.32
TRAPPC13-206ENST00000504751 TNRC18O15417 2968 aaPredicted RBP0.55□□□□□ -2.32
TRAPPC13-206ENST00000504751 AHNAK2Q8IVF2 5795 aa0.55□□□□□ -2.32
TRAPPC13-206ENST00000504751 M0R2T5 61 aa0.55□□□□□ -2.32
TRAPPC13-206ENST00000504751 PRLHP81277 87 aa0.55□□□□□ -2.32
TRAPPC13-206ENST00000504751 DEFB135Q30KP9 77 aa0.55□□□□□ -2.32
TRAPPC13-206ENST00000504751 DEFB106AQ8N104 65 aa0.55□□□□□ -2.32
TRAPPC13-206ENST00000504751 USP24Q9UPU5 2620 aa0.55□□□□□ -2.32
TRAPPC13-206ENST00000504751 UNC79Q9P2D8 2635 aa0.54□□□□□ -2.32
TRAPPC13-206ENST00000504751 AKAP13Q12802 2813 aa0.54□□□□□ -2.32
TRAPPC13-206ENST00000504751 NBASA2RRP1 2371 aa0.54□□□□□ -2.32
TRAPPC13-206ENST00000504751 ZFYVE26Q68DK2 2539 aa0.54□□□□□ -2.32
TRAPPC13-206ENST00000504751 UBR5O95071 2799 aaPredicted RBP0.53□□□□□ -2.32
TRAPPC13-206ENST00000504751 EP300Q09472 2414 aaPredicted RBP0.53□□□□□ -2.32
TRAPPC13-206ENST00000504751 KAAG1Q9UBP8 84 aa0.53□□□□□ -2.32
TRAPPC13-206ENST00000504751 HUWE1Q7Z6Z7 4374 aaKnown RBP0.52□□□□□ -2.33
TRAPPC13-206ENST00000504751 WNK1Q9H4A3 2382 aa0.52□□□□□ -2.33
TRAPPC13-206ENST00000504751 SYNE1Q8NF91 8797 aaKnown RBP0.52□□□□□ -2.33
TRAPPC13-206ENST00000504751 WFDC10BQ8IUB3 73 aa0.52□□□□□ -2.33
TRAPPC13-206ENST00000504751 LRP1Q07954 4544 aaKnown RBP0.52□□□□□ -2.33
TRAPPC13-206ENST00000504751 KIF21BO75037 1637 aa0.51□□□□□ -2.33
TRAPPC13-206ENST00000504751 SMIM2Q9BVW6 85 aa0.5□□□□□ -2.33
TRAPPC13-206ENST00000504751 NAV2Q8IVL1 2488 aa0.48□□□□□ -2.33
TRAPPC13-206ENST00000504751 MAP1BP46821 2468 aaKnown RBP0.48□□□□□ -2.33
TRAPPC13-206ENST00000504751 VPS13BQ7Z7G8 4022 aa0.47□□□□□ -2.33
TRAPPC13-206ENST00000504751 KMT2AQ03164 3969 aa0.47□□□□□ -2.33
TRAPPC13-206ENST00000504751 HECTD1Q9ULT8 2610 aa0.47□□□□□ -2.33
TRAPPC13-206ENST00000504751 H0YGG7 62 aa0.47□□□□□ -2.33
TRAPPC13-206ENST00000504751 H3BUA1 57 aa0.47□□□□□ -2.33
TRAPPC13-206ENST00000504751 CEP290O15078 2479 aa0.47□□□□□ -2.33
TRAPPC13-206ENST00000504751 PKD1L2Q7Z442 2459 aa0.47□□□□□ -2.33
TRAPPC13-206ENST00000504751 APC2O95996 2303 aa0.46□□□□□ -2.34
TRAPPC13-206ENST00000504751 ACANP16112 2415 aa0.46□□□□□ -2.34
TRAPPC13-206ENST00000504751 PDZD2O15018 2839 aa0.45□□□□□ -2.34
TRAPPC13-206ENST00000504751 COL7A1Q02388 2944 aa0.45□□□□□ -2.34
TRAPPC13-206ENST00000504751 HRNRQ86YZ3 2850 aaPredicted RBP0.45□□□□□ -2.34
TRAPPC13-206ENST00000504751 A0A0C4DFX4 3053 aa0.45□□□□□ -2.34
TRAPPC13-206ENST00000504751 SPENQ96T58 3664 aaKnown RBP0.45□□□□□ -2.34
TRAPPC13-206ENST00000504751 CUBNO60494 3623 aa0.45□□□□□ -2.34
TRAPPC13-206ENST00000504751 MYCBP2O75592 4640 aa0.44□□□□□ -2.34
TRAPPC13-206ENST00000504751 MUC5ACP98088 5654 aa0.44□□□□□ -2.34
TRAPPC13-206ENST00000504751 IGLV5-48A0A075B6I7 105 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms