RNA–Protein interactions for RNA: ENST00000503025.5

RUFY3-205, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 2

Gene RUFY3, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-205ENST00000503025 DEFB130AP0DP74 79 aa1.56□□□□□ -2.16
RUFY3-205ENST00000503025 RPL37P61927 97 aaKnown RBP1.56□□□□□ -2.16
RUFY3-205ENST00000503025 LINC01556Q5JQF7 62 aa1.56□□□□□ -2.16
RUFY3-205ENST00000503025 CRIPTQ9P021 101 aa1.56□□□□□ -2.16
RUFY3-205ENST00000503025 CACNA1EQ15878 2313 aa1.56□□□□□ -2.16
RUFY3-205ENST00000503025 TECTAO75443 2155 aa1.55□□□□□ -2.16
RUFY3-205ENST00000503025 A0A096LPF7 62 aa1.55□□□□□ -2.16
RUFY3-205ENST00000503025 J3QKU1 62 aa1.55□□□□□ -2.16
RUFY3-205ENST00000503025 DEFB136Q30KP8 78 aa1.55□□□□□ -2.16
RUFY3-205ENST00000503025 SRCAPQ6ZRS2 3230 aa1.54□□□□□ -2.16
RUFY3-205ENST00000503025 K7EIL1 84 aa1.54□□□□□ -2.16
RUFY3-205ENST00000503025 SPART-AS1P0CW21 52 aa1.54□□□□□ -2.16
RUFY3-205ENST00000503025 KRTAP6-3Q3LI67 103 aa1.54□□□□□ -2.16
RUFY3-205ENST00000503025 C10orf99Q6UWK7 81 aa1.54□□□□□ -2.16
RUFY3-205ENST00000503025 ALMS1Q8TCU4 4167 aa1.54□□□□□ -2.16
RUFY3-205ENST00000503025 SDK1Q7Z5N4 2213 aa1.54□□□□□ -2.16
RUFY3-205ENST00000503025 KRTAP13-1Q8IUC0 172 aa1.53□□□□□ -2.16
RUFY3-205ENST00000503025 DEFB124Q8NES8 71 aa1.53□□□□□ -2.16
RUFY3-205ENST00000503025 FAM186AA6NE01 2351 aa1.52□□□□□ -2.17
RUFY3-205ENST00000503025 AHCTF1Q8WYP5 2266 aa1.52□□□□□ -2.17
RUFY3-205ENST00000503025 PCNTO95613 3336 aa1.52□□□□□ -2.17
RUFY3-205ENST00000503025 PLAC4Q8WY50 150 aa1.52□□□□□ -2.17
RUFY3-205ENST00000503025 HIVEP2P31629 2446 aa1.52□□□□□ -2.17
RUFY3-205ENST00000503025 SPTBN2O15020 2390 aa1.51□□□□□ -2.17
RUFY3-205ENST00000503025 PRLHP81277 87 aa1.51□□□□□ -2.17
RUFY3-205ENST00000503025 MAP1BP46821 2468 aaKnown RBP1.5□□□□□ -2.17
RUFY3-205ENST00000503025 PKDREJQ9NTG1 2253 aa1.5□□□□□ -2.17
RUFY3-205ENST00000503025 WDR87Q6ZQQ6 2873 aa1.49□□□□□ -2.17
RUFY3-205ENST00000503025 DEFB123Q8N688 67 aa1.49□□□□□ -2.17
RUFY3-205ENST00000503025 CEP350Q5VT06 3117 aa1.49□□□□□ -2.17
RUFY3-205ENST00000503025 CENPFP49454 3210 aa1.48□□□□□ -2.17
RUFY3-205ENST00000503025 TPRP12270 2363 aaKnown RBP1.48□□□□□ -2.17
RUFY3-205ENST00000503025 HMCN1Q96RW7 5635 aa1.48□□□□□ -2.17
RUFY3-205ENST00000503025 KRTAP12-3P60328 96 aa1.47□□□□□ -2.17
RUFY3-205ENST00000503025 CEP250Q9BV73 2442 aa1.47□□□□□ -2.17
RUFY3-205ENST00000503025 A0A096LNI7 61 aa1.46□□□□□ -2.18
RUFY3-205ENST00000503025 EP300Q09472 2414 aaPredicted RBP1.46□□□□□ -2.18
RUFY3-205ENST00000503025 GOLGB1Q14789 3259 aaKnown RBP1.45□□□□□ -2.18
RUFY3-205ENST00000503025 CNOT1A5YKK6 2376 aaKnown RBP1.45□□□□□ -2.18
RUFY3-205ENST00000503025 ANKRD17O75179 2603 aaKnown RBP1.45□□□□□ -2.18
RUFY3-205ENST00000503025 SZT2Q5T011 3432 aa1.44□□□□□ -2.18
RUFY3-205ENST00000503025 SPINK1P00995 79 aa1.44□□□□□ -2.18
RUFY3-205ENST00000503025 C10orf95Q9H7T3 257 aa1.44□□□□□ -2.18
RUFY3-205ENST00000503025 S4R3F8 94 aa1.44□□□□□ -2.18
RUFY3-205ENST00000503025 RANBP2P49792 3224 aaKnown RBP1.44□□□□□ -2.18
RUFY3-205ENST00000503025 UTRNP46939 3433 aa1.44□□□□□ -2.18
RUFY3-205ENST00000503025 PCNX1Q96RV3 2341 aa1.44□□□□□ -2.18
RUFY3-205ENST00000503025 C2CD3Q4AC94 2353 aa1.43□□□□□ -2.18
RUFY3-205ENST00000503025 ZZEF1O43149 2961 aa1.43□□□□□ -2.18
RUFY3-205ENST00000503025 DEFB135Q30KP9 77 aa1.43□□□□□ -2.18
RUFY3-205ENST00000503025 UBE2DNLQ8IWF7 75 aa1.43□□□□□ -2.18
RUFY3-205ENST00000503025 COL6A3P12111 3177 aa1.43□□□□□ -2.18
RUFY3-205ENST00000503025 ROS1P08922 2347 aa1.43□□□□□ -2.18
RUFY3-205ENST00000503025 CREBBPQ92793 2442 aa1.42□□□□□ -2.18
RUFY3-205ENST00000503025 ACACAQ13085 2346 aa1.42□□□□□ -2.18
RUFY3-205ENST00000503025 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.42□□□□□ -2.187e-13■■■■■ 48.1
RUFY3-205ENST00000503025 HTN3P15516 51 aa1.42□□□□□ -2.18
RUFY3-205ENST00000503025 RPS29P62273 56 aaKnown RBP1.42□□□□□ -2.18
RUFY3-205ENST00000503025 ANKHD1Q8IWZ3 2542 aaKnown RBP1.42□□□□□ -2.18
RUFY3-205ENST00000503025 COL6A6A6NMZ7 2263 aa1.42□□□□□ -2.18
RUFY3-205ENST00000503025 PTPRZ1P23471 2315 aaPredicted RBP1.41□□□□□ -2.18
RUFY3-205ENST00000503025 AKAP6Q13023 2319 aa1.41□□□□□ -2.18
RUFY3-205ENST00000503025 M0QZ58 72 aa1.41□□□□□ -2.18
RUFY3-205ENST00000503025 TNRC18O15417 2968 aaPredicted RBP1.41□□□□□ -2.18
RUFY3-205ENST00000503025 SPINK6Q6UWN8 80 aa1.41□□□□□ -2.18
RUFY3-205ENST00000503025 APC2O95996 2303 aa1.4□□□□□ -2.18
RUFY3-205ENST00000503025 NCOR1O75376 2440 aa1.4□□□□□ -2.18
RUFY3-205ENST00000503025 UNC80Q8N2C7 3258 aa1.4□□□□□ -2.19
RUFY3-205ENST00000503025 RP1L1Q8IWN7 2480 aaPredicted RBP1.39□□□□□ -2.19
RUFY3-205ENST00000503025 CACNA1HO95180 2353 aa1.39□□□□□ -2.19
RUFY3-205ENST00000503025 DEFB4AO15263 64 aa1.39□□□□□ -2.19
RUFY3-205ENST00000503025 KRTAP21-3Q3LHN1 58 aa1.39□□□□□ -2.19
RUFY3-205ENST00000503025 VPS13AQ96RL7 3174 aa1.38□□□□□ -2.19
RUFY3-205ENST00000503025 CRCT1Q9UGL9 99 aa1.38□□□□□ -2.19
RUFY3-205ENST00000503025 APLNQ9ULZ1 77 aa1.38□□□□□ -2.19
RUFY3-205ENST00000503025 NBEAQ8NFP9 2946 aa1.38□□□□□ -2.19
RUFY3-205ENST00000503025 DNAH12Q6ZR08 3092 aa1.38□□□□□ -2.19
RUFY3-205ENST00000503025 SPTBN5Q9NRC6 3674 aaKnown RBP1.37□□□□□ -2.19
RUFY3-205ENST00000503025 SPTA1P02549 2419 aa1.37□□□□□ -2.19
RUFY3-205ENST00000503025 DNAH14Q0VDD8 3507 aa1.37□□□□□ -2.19
RUFY3-205ENST00000503025 IGF2RP11717 2491 aa1.37□□□□□ -2.19
RUFY3-205ENST00000503025 USP34Q70CQ2 3546 aa1.36□□□□□ -2.19
RUFY3-205ENST00000503025 FLG2Q5D862 2391 aaPredicted RBP1.36□□□□□ -2.19
RUFY3-205ENST00000503025 ABCA2Q9BZC7 2435 aa1.36□□□□□ -2.19
RUFY3-205ENST00000503025 Q5VSD8 79 aa1.36□□□□□ -2.19
RUFY3-205ENST00000503025 MGAQ8IWI9 3026 aa1.36□□□□□ -2.19
RUFY3-205ENST00000503025 CFAP54Q96N23 3096 aa1.36□□□□□ -2.19
RUFY3-205ENST00000503025 CHD9Q3L8U1 2897 aa1.35□□□□□ -2.19
RUFY3-205ENST00000503025 HTTP42858 3142 aa1.35□□□□□ -2.19
RUFY3-205ENST00000503025 A0A0D9SG42 100 aa1.35□□□□□ -2.19
RUFY3-205ENST00000503025 KRTAP12-4P60329 112 aa1.35□□□□□ -2.19
RUFY3-205ENST00000503025 NBASA2RRP1 2371 aa1.35□□□□□ -2.19
RUFY3-205ENST00000503025 MKI67P46013 3256 aaKnown RBP1.35□□□□□ -2.19
RUFY3-205ENST00000503025 XIRP2A4UGR9 3374 aa1.34□□□□□ -2.19
RUFY3-205ENST00000503025 CHD7Q9P2D1 2997 aa1.34□□□□□ -2.19
RUFY3-205ENST00000503025 EP400Q96L91 3159 aa1.34□□□□□ -2.19
RUFY3-205ENST00000503025 CSPG4Q6UVK1 2322 aa1.34□□□□□ -2.2
RUFY3-205ENST00000503025 CFAP47Q6ZTR5 3102 aa1.33□□□□□ -2.2
RUFY3-205ENST00000503025 TRANK1O15050 2925 aa1.33□□□□□ -2.2
RUFY3-205ENST00000503025 SPTBN4Q9H254 2564 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms