RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 SPRR1BP22528 89 aa6.77□□□□□ -1.33
CTTN-208ENST00000498223 ATXN8Q156A1 80 aa6.77□□□□□ -1.33
CTTN-208ENST00000498223 OCIAD2Q56VL3 154 aa6.77□□□□□ -1.33
CTTN-208ENST00000498223 IGLV5-48A0A075B6I7 105 aa6.76□□□□□ -1.33
CTTN-208ENST00000498223 F8WEM9 126 aa6.76□□□□□ -1.33
CTTN-208ENST00000498223 LST1O00453 97 aa6.76□□□□□ -1.33
CTTN-208ENST00000498223 LINC01547P58512 204 aaPredicted RBP6.76□□□□□ -1.33
CTTN-208ENST00000498223 MOBPQ13875 183 aa6.76□□□□□ -1.33
CTTN-208ENST00000498223 KRTAP13-2Q52LG2 175 aa6.76□□□□□ -1.33
CTTN-208ENST00000498223 Q8N377 158 aa6.76□□□□□ -1.33
CTTN-208ENST00000498223 TCL1BO95988 128 aa6.75□□□□□ -1.33
CTTN-208ENST00000498223 TRACP01848 142 aa6.75□□□□□ -1.33
CTTN-208ENST00000498223 FABP2P12104 132 aa6.75□□□□□ -1.33
CTTN-208ENST00000498223 KRTAP10-8P60410 259 aa6.75□□□□□ -1.33
CTTN-208ENST00000498223 ORMDL1Q9P0S3 153 aa6.75□□□□□ -1.33
CTTN-208ENST00000498223 A0A1W2PPM0 123 aa6.74□□□□□ -1.33
CTTN-208ENST00000498223 MT1HL1P0DM35 61 aa6.74□□□□□ -1.33
CTTN-208ENST00000498223 PPDPFLQ8WWR9 84 aa6.74□□□□□ -1.33
CTTN-208ENST00000498223 TRBV20-1A0A075B6N2 111 aa6.73□□□□□ -1.33
CTTN-208ENST00000498223 Q8NBF4 154 aa6.73□□□□□ -1.33
CTTN-208ENST00000498223 H3BQ85 93 aa6.72□□□□□ -1.33
CTTN-208ENST00000498223 C4orf48Q5BLP8 95 aa6.72□□□□□ -1.33
CTTN-208ENST00000498223 SMIM29Q86T20 159 aa6.72□□□□□ -1.33
CTTN-208ENST00000498223 SSBP3-AS1Q7Z2R9 100 aa6.71□□□□□ -1.34
CTTN-208ENST00000498223 LINC00304Q8N9R0 145 aa6.71□□□□□ -1.34
CTTN-208ENST00000498223 TMEM256-PLSCR3K7ERE1 68 aa6.7□□□□□ -1.34
CTTN-208ENST00000498223 BAALC-AS2P0C853 105 aa6.7□□□□□ -1.34
CTTN-208ENST00000498223 NDUFV3P56181 108 aaKnown RBP6.7□□□□□ -1.34
CTTN-208ENST00000498223 SPCS1Q9Y6A9 102 aa6.7□□□□□ -1.34
CTTN-208ENST00000498223 A0A1B0GV72 72 aa6.68□□□□□ -1.34
CTTN-208ENST00000498223 C9JAW5 83 aa6.68□□□□□ -1.34
CTTN-208ENST00000498223 UBR4Q5T4S7 5183 aa6.68□□□□□ -1.34
CTTN-208ENST00000498223 H3BMG7 143 aa6.67□□□□□ -1.34
CTTN-208ENST00000498223 SPAG11AQ6PDA7 123 aa6.67□□□□□ -1.34
CTTN-208ENST00000498223 HRCT1Q6UXD1 115 aa6.67□□□□□ -1.34
CTTN-208ENST00000498223 Q6JHZ5 121 aa6.66□□□□□ -1.34
CTTN-208ENST00000498223 A0A0G2JQZ4 141 aa6.65□□□□□ -1.34
CTTN-208ENST00000498223 UBE2V1Q13404 147 aa6.65□□□□□ -1.34
CTTN-208ENST00000498223 ANKRD29Q8N6D5 301 aa6.65□□□□□ -1.34
CTTN-208ENST00000498223 LCE2DQ5TA82 110 aaPredicted RBP6.64□□□□□ -1.35
CTTN-208ENST00000498223 IGLV8-61A0A075B6I0 122 aa6.63□□□□□ -1.35
CTTN-208ENST00000498223 K7EP34 96 aa6.63□□□□□ -1.35
CTTN-208ENST00000498223 IGFL1Q6UW32 110 aa6.63□□□□□ -1.35
CTTN-208ENST00000498223 GTF2H5Q6ZYL4 71 aa6.63□□□□□ -1.35
CTTN-208ENST00000498223 MTURNQ8N3F0 131 aa6.63□□□□□ -1.35
CTTN-208ENST00000498223 TNXBP22105 4242 aa6.62□□□□□ -1.35
CTTN-208ENST00000498223 SPINK1P00995 79 aa6.62□□□□□ -1.35
CTTN-208ENST00000498223 H3BT86 120 aa6.61□□□□□ -1.35
CTTN-208ENST00000498223 RBM3P98179 157 aaKnown RBP6.6□□□□□ -1.35
CTTN-208ENST00000498223 CD164Q04900 197 aa6.6□□□□□ -1.35
CTTN-208ENST00000498223 DSCR8Q96T75 97 aa6.6□□□□□ -1.35
CTTN-208ENST00000498223 LIMD2Q9BT23 127 aa6.59□□□□□ -1.35
CTTN-208ENST00000498223 JMJD7-PLA2G4BH0Y9G9 81 aa6.58□□□□□ -1.36
CTTN-208ENST00000498223 VPS25Q9BRG1 176 aa6.58□□□□□ -1.36
CTTN-208ENST00000498223 TEN1Q86WV5 123 aa6.57□□□□□ -1.36
CTTN-208ENST00000498223 RETNLBQ9BQ08 111 aa6.57□□□□□ -1.36
CTTN-208ENST00000498223 RPS29P62273 56 aaKnown RBP6.56□□□□□ -1.36
CTTN-208ENST00000498223 PRR4Q16378 134 aa6.56□□□□□ -1.36
CTTN-208ENST00000498223 TRBV7-7A0A0K0K1E9 115 aa6.55□□□□□ -1.36
CTTN-208ENST00000498223 LRP2P98164 4655 aa6.55□□□□□ -1.36
CTTN-208ENST00000498223 A0A1B0GV90 55 aa6.54□□□□□ -1.36
CTTN-208ENST00000498223 CCKP06307 115 aa6.54□□□□□ -1.36
CTTN-208ENST00000498223 C14orf132Q9NPU4 83 aa6.54□□□□□ -1.36
CTTN-208ENST00000498223 TRBV7-4A0A0J9YYF1 115 aa6.53□□□□□ -1.36
CTTN-208ENST00000498223 A0A1W2PNM2 257 aa6.53□□□□□ -1.36
CTTN-208ENST00000498223 F8W1H4 67 aa6.52□□□□□ -1.37
CTTN-208ENST00000498223 PDE6GP18545 87 aa6.52□□□□□ -1.37
CTTN-208ENST00000498223 SMCPP49901 116 aaPredicted RBP6.52□□□□□ -1.37
CTTN-208ENST00000498223 Q6Q795 121 aa6.52□□□□□ -1.37
CTTN-208ENST00000498223 PRO0461Q9UI25 63 aa6.52□□□□□ -1.37
CTTN-208ENST00000498223 A0A087WSZ3 146 aa6.51□□□□□ -1.37
CTTN-208ENST00000498223 SS18L2Q9UHA2 77 aa6.51□□□□□ -1.37
CTTN-208ENST00000498223 LOC110117498A0A087WWA1 95 aa6.49□□□□□ -1.37
CTTN-208ENST00000498223 Q6ZQT0 140 aa6.49□□□□□ -1.37
CTTN-208ENST00000498223 OBSCN-AS1Q96MR7 158 aa6.49□□□□□ -1.37
CTTN-208ENST00000498223 IGLV7-46A0A075B6I9 117 aa6.48□□□□□ -1.37
CTTN-208ENST00000498223 Q5XG85 94 aa6.48□□□□□ -1.37
CTTN-208ENST00000498223 C21orf62-AS1Q17RA5 79 aa6.47□□□□□ -1.37
CTTN-208ENST00000498223 FP248Q71RG6 208 aaPredicted RBP6.47□□□□□ -1.37
CTTN-208ENST00000498223 RNF213Q63HN8 5207 aa6.46□□□□□ -1.37
CTTN-208ENST00000498223 ETDBQ3ZM63 59 aa6.46□□□□□ -1.38
CTTN-208ENST00000498223 C1orf195Q5TG92 126 aa6.45□□□□□ -1.38
CTTN-208ENST00000498223 ASB16-AS1Q495Z4 193 aa6.44□□□□□ -1.38
CTTN-208ENST00000498223 A0A1B0GW54 56 aa6.42□□□□□ -1.38
CTTN-208ENST00000498223 SIGMAR1Q99720 223 aa6.4□□□□□ -1.38
CTTN-208ENST00000498223 IGKV4-1P06312 121 aa6.39□□□□□ -1.39
CTTN-208ENST00000498223 NREPQ16612 68 aa6.39□□□□□ -1.39
CTTN-208ENST00000498223 DEFB116Q30KQ4 102 aa6.39□□□□□ -1.39
CTTN-208ENST00000498223 CDIP1Q9H305 208 aa6.38□□□□□ -1.39
CTTN-208ENST00000498223 C9orf92A6NGG3 77 aa6.37□□□□□ -1.39
CTTN-208ENST00000498223 Q96NJ1 140 aa6.37□□□□□ -1.39
CTTN-208ENST00000498223 TPRXLQ17RH7 258 aa6.36□□□□□ -1.39
CTTN-208ENST00000498223 LINC00472Q9H8W2 130 aa6.36□□□□□ -1.39
CTTN-208ENST00000498223 LPAP08519 4548 aa6.36□□□□□ -1.39
CTTN-208ENST00000498223 J3KT08 172 aa6.35□□□□□ -1.39
CTTN-208ENST00000498223 KRTAP13-3Q3SY46 172 aa6.35□□□□□ -1.39
CTTN-208ENST00000498223 KRTAP3-3Q9BYR6 98 aa6.33□□□□□ -1.4
CTTN-208ENST00000498223 KRTAP3-2Q9BYR7 98 aa6.33□□□□□ -1.4
CTTN-208ENST00000498223 UBL5Q9BZL1 73 aa6.33□□□□□ -1.4
CTTN-208ENST00000498223 NDUFB1O75438 58 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms