RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 CHD7Q9P2D1 2997 aa-0.44□□□□□ -2.48
PSPC1-205ENST00000497722 DNAH17Q9UFH2 4485 aa-0.44□□□□□ -2.48
PSPC1-205ENST00000497722 CSMD1Q96PZ7 3565 aa-0.44□□□□□ -2.48
PSPC1-205ENST00000497722 ITPR2Q14571 2701 aa-0.44□□□□□ -2.48
PSPC1-205ENST00000497722 CEP295Q9C0D2 2601 aa-0.45□□□□□ -2.48
PSPC1-205ENST00000497722 MYO15AQ9UKN7 3530 aa-0.45□□□□□ -2.48
PSPC1-205ENST00000497722 SPTY2D1-AS1A0A0U1RR47 76 aa-0.45□□□□□ -2.48
PSPC1-205ENST00000497722 MT1EP04732 61 aa-0.45□□□□□ -2.48
PSPC1-205ENST00000497722 KRTAP19-5Q3LI72 72 aa-0.45□□□□□ -2.48
PSPC1-205ENST00000497722 PSENENQ9NZ42 101 aa-0.45□□□□□ -2.48
PSPC1-205ENST00000497722 HIGD1BQ9P298 99 aa-0.45□□□□□ -2.48
PSPC1-205ENST00000497722 C4AP0C0L4 1744 aa-0.45□□□□□ -2.48
PSPC1-205ENST00000497722 C4BP0C0L5 1744 aa-0.45□□□□□ -2.48
PSPC1-205ENST00000497722 CFAP46Q8IYW2 2715 aa-0.45□□□□□ -2.48
PSPC1-205ENST00000497722 DNAH8Q96JB1 4490 aa-0.46□□□□□ -2.48
PSPC1-205ENST00000497722 SMG1Q96Q15 3661 aaKnown RBP-0.46□□□□□ -2.48
PSPC1-205ENST00000497722 ABCC10Q5T3U5 1492 aa-0.46□□□□□ -2.48
PSPC1-205ENST00000497722 TLN1Q9Y490 2541 aaKnown RBP-0.46□□□□□ -2.48
PSPC1-205ENST00000497722 RGPD3A6NKT7 1758 aaPredicted RBP-0.46□□□□□ -2.48
PSPC1-205ENST00000497722 RGPD4Q7Z3J3 1758 aa-0.46□□□□□ -2.48
PSPC1-205ENST00000497722 RPS29P62273 56 aaKnown RBP-0.46□□□□□ -2.48
PSPC1-205ENST00000497722 PRLHP81277 87 aa-0.46□□□□□ -2.48
PSPC1-205ENST00000497722 ETDBQ3ZM63 59 aa-0.46□□□□□ -2.48
PSPC1-205ENST00000497722 NMSQ5H8A3 153 aa-0.46□□□□□ -2.48
PSPC1-205ENST00000497722 ALKAL2Q6UX46 152 aa-0.46□□□□□ -2.48
PSPC1-205ENST00000497722 COX6B2Q6YFQ2 88 aa-0.46□□□□□ -2.48
PSPC1-205ENST00000497722 WFDC13Q8IUB5 93 aa-0.46□□□□□ -2.48
PSPC1-205ENST00000497722 PLXNC1O60486 1568 aa-0.46□□□□□ -2.48
PSPC1-205ENST00000497722 DNAH10Q8IVF4 4471 aa-0.46□□□□□ -2.48
PSPC1-205ENST00000497722 ACACBO00763 2458 aa-0.46□□□□□ -2.48
PSPC1-205ENST00000497722 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.46□□□□□ -2.48
PSPC1-205ENST00000497722 SPENQ96T58 3664 aaKnown RBP-0.46□□□□□ -2.48
PSPC1-205ENST00000497722 ATP10BO94823 1461 aa-0.47□□□□□ -2.48
PSPC1-205ENST00000497722 LRRC9Q6ZRR7 1453 aa-0.47□□□□□ -2.48
PSPC1-205ENST00000497722 MAGI2Q86UL8 1455 aa-0.47□□□□□ -2.48
PSPC1-205ENST00000497722 MAP3K1Q13233 1512 aa-0.47□□□□□ -2.48
PSPC1-205ENST00000497722 THOC2Q8NI27 1593 aaKnown RBP-0.47□□□□□ -2.48
PSPC1-205ENST00000497722 MYO9AB2RTY4 2548 aa-0.47□□□□□ -2.48
PSPC1-205ENST00000497722 C5orf42Q9H799 3197 aa-0.47□□□□□ -2.48
PSPC1-205ENST00000497722 RPL38P63173 70 aaKnown RBP-0.47□□□□□ -2.48
PSPC1-205ENST00000497722 UBE2D4Q9Y2X8 147 aa-0.47□□□□□ -2.48
PSPC1-205ENST00000497722 ADGRG4Q8IZF6 3080 aa-0.47□□□□□ -2.49
PSPC1-205ENST00000497722 BOD1L1Q8NFC6 3051 aa-0.47□□□□□ -2.49
PSPC1-205ENST00000497722 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.47□□□□□ -2.49
PSPC1-205ENST00000497722 TLN2Q9Y4G6 2542 aa-0.47□□□□□ -2.49
PSPC1-205ENST00000497722 DMXL2Q8TDJ6 3036 aa-0.48□□□□□ -2.49
PSPC1-205ENST00000497722 UQCRHLA0A096LP55 91 aa-0.48□□□□□ -2.49
PSPC1-205ENST00000497722 LINC01546A6NGU7 62 aa-0.48□□□□□ -2.49
PSPC1-205ENST00000497722 F8WEM9 126 aa-0.48□□□□□ -2.49
PSPC1-205ENST00000497722 MT1FP04733 61 aa-0.48□□□□□ -2.49
PSPC1-205ENST00000497722 TNP1P09430 55 aa-0.48□□□□□ -2.49
PSPC1-205ENST00000497722 NCMAPQ5T1S8 102 aa-0.48□□□□□ -2.49
PSPC1-205ENST00000497722 LELP1Q5T871 98 aa-0.48□□□□□ -2.49
PSPC1-205ENST00000497722 ZNF720Q7Z2F6 126 aa-0.48□□□□□ -2.49
PSPC1-205ENST00000497722 DEFB106AQ8N104 65 aa-0.48□□□□□ -2.49
PSPC1-205ENST00000497722 RGPD1P0DJD0 1748 aa-0.48□□□□□ -2.49
PSPC1-205ENST00000497722 SPTBN5Q9NRC6 3674 aaKnown RBP-0.48□□□□□ -2.49
PSPC1-205ENST00000497722 CEP162Q5TB80 1403 aa-0.48□□□□□ -2.49
PSPC1-205ENST00000497722 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.49□□□□□ -2.49
PSPC1-205ENST00000497722 DEPDC5O75140 1603 aa-0.49□□□□□ -2.49
PSPC1-205ENST00000497722 NESP48681 1621 aa-0.49□□□□□ -2.49
PSPC1-205ENST00000497722 SUPT6HQ7KZ85 1726 aaKnown RBP-0.49□□□□□ -2.49
PSPC1-205ENST00000497722 A8MTW9 85 aa-0.49□□□□□ -2.49
PSPC1-205ENST00000497722 M0R143 59 aa-0.49□□□□□ -2.49
PSPC1-205ENST00000497722 IGLC2P0DOY2 106 aa-0.49□□□□□ -2.49
PSPC1-205ENST00000497722 IGLC3P0DOY3 106 aa-0.49□□□□□ -2.49
PSPC1-205ENST00000497722 COL5A1-AS1Q5SY13 56 aa-0.49□□□□□ -2.49
PSPC1-205ENST00000497722 MAGI3Q5TCQ9 1506 aa-0.49□□□□□ -2.49
PSPC1-205ENST00000497722 IGLV5-48A0A075B6I7 105 aa-0.5□□□□□ -2.49
PSPC1-205ENST00000497722 MMP24-AS1A0A0U1RRL7 71 aa-0.5□□□□□ -2.49
PSPC1-205ENST00000497722 D6R8Y8 96 aa-0.5□□□□□ -2.49
PSPC1-205ENST00000497722 LEPROTL1O95214 131 aa-0.5□□□□□ -2.49
PSPC1-205ENST00000497722 SPART-AS1P0CW21 52 aa-0.5□□□□□ -2.49
PSPC1-205ENST00000497722 FAUP35544 74 aaKnown RBP-0.5□□□□□ -2.49
PSPC1-205ENST00000497722 MUSTN1Q8IVN3 82 aa-0.5□□□□□ -2.49
PSPC1-205ENST00000497722 PRO3102Q9H379 93 aa-0.5□□□□□ -2.49
PSPC1-205ENST00000497722 ATP7BP35670 1465 aa-0.5□□□□□ -2.49
PSPC1-205ENST00000497722 ATMQ13315 3056 aa-0.5□□□□□ -2.49
PSPC1-205ENST00000497722 USP32Q8NFA0 1604 aa-0.5□□□□□ -2.49
PSPC1-205ENST00000497722 CDC42BPAQ5VT25 1732 aa-0.5□□□□□ -2.49
PSPC1-205ENST00000497722 ZFHX4Q86UP3 3567 aa-0.5□□□□□ -2.49
PSPC1-205ENST00000497722 UBR3Q6ZT12 1888 aa-0.5□□□□□ -2.49
PSPC1-205ENST00000497722 CSMD2Q7Z408 3487 aa-0.51□□□□□ -2.49
PSPC1-205ENST00000497722 POLR1AO95602 1720 aaPredicted RBP-0.51□□□□□ -2.49
PSPC1-205ENST00000497722 BPTFQ12830 3046 aa-0.51□□□□□ -2.49
PSPC1-205ENST00000497722 NWD1Q149M9 1564 aa-0.51□□□□□ -2.49
PSPC1-205ENST00000497722 LRRC7Q96NW7 1537 aa-0.51□□□□□ -2.49
PSPC1-205ENST00000497722 TTTY10Q9BZA0 68 aa-0.51□□□□□ -2.49
PSPC1-205ENST00000497722 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.51□□□□□ -2.49
PSPC1-205ENST00000497722 TRRAPQ9Y4A5 3859 aa-0.51□□□□□ -2.49
PSPC1-205ENST00000497722 WIZO95785 1651 aa-0.52□□□□□ -2.49
PSPC1-205ENST00000497722 TMEM131LA2VDJ0 1609 aa-0.52□□□□□ -2.49
PSPC1-205ENST00000497722 PRUNE2Q8WUY3 3088 aa-0.52□□□□□ -2.49
PSPC1-205ENST00000497722 NDUFA3O95167 84 aa-0.52□□□□□ -2.49
PSPC1-205ENST00000497722 DEFB136Q30KP8 78 aa-0.52□□□□□ -2.49
PSPC1-205ENST00000497722 SNHG12Q9BXW3 62 aa-0.52□□□□□ -2.49
PSPC1-205ENST00000497722 SPEGQ15772 3267 aa-0.52□□□□□ -2.49
PSPC1-205ENST00000497722 LRBAP50851 2863 aa-0.52□□□□□ -2.49
PSPC1-205ENST00000497722 LTN1O94822 1766 aa-0.52□□□□□ -2.49
PSPC1-205ENST00000497722 SPTAN1Q13813 2472 aaKnown RBP-0.53□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms