RNA–Protein interactions for RNA: ENST00000497542.1

NT5C3A-212, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

TSL 4

Gene NT5C3A, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-212ENST00000497542 IFI6P09912 130 aa0.56□□□□□ -2.32
NT5C3A-212ENST00000497542 SMIM13P0DJ93 91 aa0.56□□□□□ -2.32
NT5C3A-212ENST00000497542 HMGA1P17096 107 aaKnown RBP0.56□□□□□ -2.32
NT5C3A-212ENST00000497542 NBEAQ8NFP9 2946 aa0.56□□□□□ -2.32
NT5C3A-212ENST00000497542 CICQ96RK0 1608 aaPredicted RBP0.56□□□□□ -2.32
NT5C3A-212ENST00000497542 LAMA3Q16787 3333 aa0.56□□□□□ -2.32
NT5C3A-212ENST00000497542 TLN1Q9Y490 2541 aaKnown RBP0.56□□□□□ -2.32
NT5C3A-212ENST00000497542 LRRIQ1Q96JM4 1722 aa0.55□□□□□ -2.32
NT5C3A-212ENST00000497542 ASPMQ8IZT6 3477 aa0.55□□□□□ -2.32
NT5C3A-212ENST00000497542 MDN1Q9NU22 5596 aa0.55□□□□□ -2.32
NT5C3A-212ENST00000497542 RIF1Q5UIP0 2472 aaKnown RBP0.55□□□□□ -2.32
NT5C3A-212ENST00000497542 UTRNP46939 3433 aa0.55□□□□□ -2.32
NT5C3A-212ENST00000497542 LCE6AA0A183 80 aa0.55□□□□□ -2.32
NT5C3A-212ENST00000497542 COX6B2Q6YFQ2 88 aa0.55□□□□□ -2.32
NT5C3A-212ENST00000497542 APLNQ9ULZ1 77 aa0.55□□□□□ -2.32
NT5C3A-212ENST00000497542 USP34Q70CQ2 3546 aa0.55□□□□□ -2.32
NT5C3A-212ENST00000497542 DOT1LQ8TEK3 1739 aa0.55□□□□□ -2.32
NT5C3A-212ENST00000497542 TENM2Q9NT68 2774 aa0.55□□□□□ -2.32
NT5C3A-212ENST00000497542 MUC3AQ02505 3323 aa0.54□□□□□ -2.32
NT5C3A-212ENST00000497542 CELSR1Q9NYQ6 3014 aa0.54□□□□□ -2.32
NT5C3A-212ENST00000497542 CFAP54Q96N23 3096 aa0.54□□□□□ -2.32
NT5C3A-212ENST00000497542 C5orf42Q9H799 3197 aa0.54□□□□□ -2.32
NT5C3A-212ENST00000497542 SMCO4Q9NRQ5 59 aa0.54□□□□□ -2.32
NT5C3A-212ENST00000497542 DCHS1Q96JQ0 3298 aa0.54□□□□□ -2.32
NT5C3A-212ENST00000497542 BRCA2P51587 3418 aa0.54□□□□□ -2.32
NT5C3A-212ENST00000497542 SPTAN1Q13813 2472 aaKnown RBP0.54□□□□□ -2.32
NT5C3A-212ENST00000497542 HIVEP1P15822 2718 aa0.53□□□□□ -2.32
NT5C3A-212ENST00000497542 MXRA5Q9NR99 2828 aa0.53□□□□□ -2.32
NT5C3A-212ENST00000497542 FXYD6Q9H0Q3 95 aa0.53□□□□□ -2.32
NT5C3A-212ENST00000497542 CD163L1Q9NR16 1453 aa0.53□□□□□ -2.33
NT5C3A-212ENST00000497542 HTTP42858 3142 aa0.53□□□□□ -2.33
NT5C3A-212ENST00000497542 CENPFP49454 3210 aa0.53□□□□□ -2.33
NT5C3A-212ENST00000497542 WNK2Q9Y3S1 2297 aa0.52□□□□□ -2.33
NT5C3A-212ENST00000497542 H1FX-AS1Q4G0G2 97 aa0.52□□□□□ -2.33
NT5C3A-212ENST00000497542 NWD1Q149M9 1564 aa0.52□□□□□ -2.33
NT5C3A-212ENST00000497542 CFAP43Q8NDM7 1665 aa0.52□□□□□ -2.33
NT5C3A-212ENST00000497542 ACANP16112 2415 aa0.52□□□□□ -2.33
NT5C3A-212ENST00000497542 PDCD5O14737 125 aa0.51□□□□□ -2.33
NT5C3A-212ENST00000497542 NREPQ16612 68 aa0.51□□□□□ -2.33
NT5C3A-212ENST00000497542 CSPG4Q6UVK1 2322 aa0.51□□□□□ -2.33
NT5C3A-212ENST00000497542 COL12A1Q99715 3063 aa0.51□□□□□ -2.33
NT5C3A-212ENST00000497542 CDKN2A-AS1Q9UH64 79 aa0.51□□□□□ -2.33
NT5C3A-212ENST00000497542 ANKRD50Q9ULJ7 1429 aa0.51□□□□□ -2.33
NT5C3A-212ENST00000497542 TLN2Q9Y4G6 2542 aa0.5□□□□□ -2.33
NT5C3A-212ENST00000497542 GOLGB1Q14789 3259 aaKnown RBP0.5□□□□□ -2.33
NT5C3A-212ENST00000497542 KLK9Q2XQG4 91 aa0.5□□□□□ -2.33
NT5C3A-212ENST00000497542 HEPN1Q6WQI6 88 aa0.5□□□□□ -2.33
NT5C3A-212ENST00000497542 DMBT1Q9UGM3 2413 aaPredicted RBP0.5□□□□□ -2.33
NT5C3A-212ENST00000497542 DSPP15924 2871 aaKnown RBP0.5□□□□□ -2.33
NT5C3A-212ENST00000497542 NF1P21359 2839 aa0.5□□□□□ -2.33
NT5C3A-212ENST00000497542 MYO5CQ9NQX4 1742 aa0.5□□□□□ -2.33
NT5C3A-212ENST00000497542 UGGT2Q9NYU1 1516 aa0.49□□□□□ -2.33
NT5C3A-212ENST00000497542 MGAM2Q2M2H8 2515 aa0.49□□□□□ -2.33
NT5C3A-212ENST00000497542 TGP01266 2768 aa0.49□□□□□ -2.33
NT5C3A-212ENST00000497542 PRRC2CQ9Y520 2896 aaKnown RBP0.48□□□□□ -2.33
NT5C3A-212ENST00000497542 CRYBG3Q68DQ2 2970 aa0.48□□□□□ -2.33
NT5C3A-212ENST00000497542 TNRC6CQ9HCJ0 1690 aaKnown RBP0.48□□□□□ -2.33
NT5C3A-212ENST00000497542 IQGAP3Q86VI3 1631 aa0.48□□□□□ -2.33
NT5C3A-212ENST00000497542 CEP290O15078 2479 aa0.47□□□□□ -2.33
NT5C3A-212ENST00000497542 FAT3Q8TDW7 4589 aa0.47□□□□□ -2.33
NT5C3A-212ENST00000497542 FAM186AA6NE01 2351 aa0.47□□□□□ -2.33
NT5C3A-212ENST00000497542 USH2AO75445 5202 aa0.47□□□□□ -2.33
NT5C3A-212ENST00000497542 WDR87Q6ZQQ6 2873 aa0.46□□□□□ -2.34
NT5C3A-212ENST00000497542 NDUFA4O00483 81 aa0.46□□□□□ -2.34
NT5C3A-212ENST00000497542 DUOX2Q9NRD8 1548 aa0.46□□□□□ -2.34
NT5C3A-212ENST00000497542 LOC400499M0QZD8 3231 aa0.46□□□□□ -2.34
NT5C3A-212ENST00000497542 MUC12Q9UKN1 5478 aa0.46□□□□□ -2.34
NT5C3A-212ENST00000497542 EIF2AK4Q9P2K8 1649 aaKnown RBP0.46□□□□□ -2.34
NT5C3A-212ENST00000497542 MTORP42345 2549 aa0.45□□□□□ -2.34
NT5C3A-212ENST00000497542 ITPR2Q14571 2701 aa0.45□□□□□ -2.34
NT5C3A-212ENST00000497542 COL7A1Q02388 2944 aa0.45□□□□□ -2.34
NT5C3A-212ENST00000497542 SYNE1Q8NF91 8797 aaKnown RBP0.45□□□□□ -2.34
NT5C3A-212ENST00000497542 DEFA5Q01523 94 aa0.45□□□□□ -2.34
NT5C3A-212ENST00000497542 NIPBLQ6KC79 2804 aaeCLIP0.45□□□□□ -2.34
NT5C3A-212ENST00000497542 DNAH14Q0VDD8 3507 aa0.44□□□□□ -2.34
NT5C3A-212ENST00000497542 FRYLO94915 3013 aa0.44□□□□□ -2.34
NT5C3A-212ENST00000497542 LELP1Q5T871 98 aa0.44□□□□□ -2.34
NT5C3A-212ENST00000497542 LRBAP50851 2863 aa0.44□□□□□ -2.34
NT5C3A-212ENST00000497542 XIRP2A4UGR9 3374 aa0.43□□□□□ -2.34
NT5C3A-212ENST00000497542 PLCH1Q4KWH8 1693 aa0.43□□□□□ -2.34
NT5C3A-212ENST00000497542 SPENQ96T58 3664 aaKnown RBP0.43□□□□□ -2.34
NT5C3A-212ENST00000497542 KNL1Q8NG31 2342 aa0.43□□□□□ -2.34
NT5C3A-212ENST00000497542 WFDC13Q8IUB5 93 aa0.43□□□□□ -2.34
NT5C3A-212ENST00000497542 CSMD2Q7Z408 3487 aa0.43□□□□□ -2.34
NT5C3A-212ENST00000497542 LRP1Q07954 4544 aaKnown RBP0.43□□□□□ -2.34
NT5C3A-212ENST00000497542 NBPF19A0A087WUL8 3843 aa0.43□□□□□ -2.34
NT5C3A-212ENST00000497542 LMTK2Q8IWU2 1503 aa0.43□□□□□ -2.34
NT5C3A-212ENST00000497542 FRYQ5TBA9 3013 aa0.42□□□□□ -2.34
NT5C3A-212ENST00000497542 RICTORQ6R327 1708 aa0.42□□□□□ -2.34
NT5C3A-212ENST00000497542 NDUFA3O95167 84 aa0.42□□□□□ -2.34
NT5C3A-212ENST00000497542 VPS13AQ96RL7 3174 aa0.42□□□□□ -2.34
NT5C3A-212ENST00000497542 FREM2Q5SZK8 3169 aa0.41□□□□□ -2.34
NT5C3A-212ENST00000497542 SMG1Q96Q15 3661 aaKnown RBP0.41□□□□□ -2.34
NT5C3A-212ENST00000497542 HRNRQ86YZ3 2850 aaPredicted RBP0.41□□□□□ -2.34
NT5C3A-212ENST00000497542 CDH23Q9H251 3354 aa0.41□□□□□ -2.34
NT5C3A-212ENST00000497542 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
NT5C3A-212ENST00000497542 H3BVH4 76 aa0.41□□□□□ -2.34
NT5C3A-212ENST00000497542 CLASP1Q7Z460 1538 aa0.41□□□□□ -2.34
NT5C3A-212ENST00000497542 DMXL1Q9Y485 3027 aa0.41□□□□□ -2.34
NT5C3A-212ENST00000497542 PRUNE2Q8WUY3 3088 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms