RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 A0A1B0GX51 115 aa9.28□□□□□ -0.92
FAM3A-220ENST00000497506 SNCGO76070 127 aa9.28□□□□□ -0.92
FAM3A-220ENST00000497506 CLEC2BQ92478 149 aa9.28□□□□□ -0.92
FAM3A-220ENST00000497506 PPDPFLQ8WWR9 84 aa9.27□□□□□ -0.93
FAM3A-220ENST00000497506 COX6CP09669 75 aa9.26□□□□□ -0.93
FAM3A-220ENST00000497506 PRR4Q16378 134 aa9.26□□□□□ -0.93
FAM3A-220ENST00000497506 RETNLBQ9BQ08 111 aa9.26□□□□□ -0.93
FAM3A-220ENST00000497506 RPS29P62273 56 aaKnown RBP9.25□□□□□ -0.93
FAM3A-220ENST00000497506 OCIAD2Q56VL3 154 aa9.25□□□□□ -0.93
FAM3A-220ENST00000497506 A0A0G2JQZ4 141 aa9.23□□□□□ -0.93
FAM3A-220ENST00000497506 IGLV8-61A0A075B6I0 122 aa9.22□□□□□ -0.93
FAM3A-220ENST00000497506 F8WEM9 126 aa9.22□□□□□ -0.93
FAM3A-220ENST00000497506 SNHG12Q9BXW3 62 aa9.22□□□□□ -0.93
FAM3A-220ENST00000497506 HRCT1Q6UXD1 115 aa9.21□□□□□ -0.94
FAM3A-220ENST00000497506 SCGB1C2P0DMR2 95 aa9.2□□□□□ -0.94
FAM3A-220ENST00000497506 CD164Q04900 197 aa9.2□□□□□ -0.94
FAM3A-220ENST00000497506 LRP2P98164 4655 aa9.19□□□□□ -0.94
FAM3A-220ENST00000497506 BATFQ16520 125 aa9.19□□□□□ -0.94
FAM3A-220ENST00000497506 NAA38Q9BRA0 125 aaKnown RBP9.18□□□□□ -0.94
FAM3A-220ENST00000497506 LST1O00453 97 aa9.17□□□□□ -0.94
FAM3A-220ENST00000497506 DNAL4O96015 105 aa9.17□□□□□ -0.94
FAM3A-220ENST00000497506 GHRHP01286 108 aa9.17□□□□□ -0.94
FAM3A-220ENST00000497506 NDUFV3P56181 108 aaKnown RBP9.17□□□□□ -0.94
FAM3A-220ENST00000497506 Q6JHZ5 121 aa9.17□□□□□ -0.94
FAM3A-220ENST00000497506 LPAP08519 4548 aa9.17□□□□□ -0.94
FAM3A-220ENST00000497506 TRACP01848 142 aa9.16□□□□□ -0.94
FAM3A-220ENST00000497506 IGFL1Q6UW32 110 aa9.16□□□□□ -0.94
FAM3A-220ENST00000497506 ORMDL1Q9P0S3 153 aa9.16□□□□□ -0.94
FAM3A-220ENST00000497506 H3BUT2 72 aa9.15□□□□□ -0.94
FAM3A-220ENST00000497506 FABP2P12104 132 aa9.15□□□□□ -0.94
FAM3A-220ENST00000497506 IGLV7-46A0A075B6I9 117 aa9.14□□□□□ -0.95
FAM3A-220ENST00000497506 FP248Q71RG6 208 aaPredicted RBP9.14□□□□□ -0.95
FAM3A-220ENST00000497506 LIMD2Q9BT23 127 aa9.14□□□□□ -0.95
FAM3A-220ENST00000497506 H3BQ85 93 aa9.12□□□□□ -0.95
FAM3A-220ENST00000497506 Q5XG85 94 aa9.12□□□□□ -0.95
FAM3A-220ENST00000497506 TCL1BO95988 128 aa9.11□□□□□ -0.95
FAM3A-220ENST00000497506 H3BMG7 143 aa9.1□□□□□ -0.95
FAM3A-220ENST00000497506 TMEM256-PLSCR3K7ERE1 68 aa9.1□□□□□ -0.95
FAM3A-220ENST00000497506 TAX1BP3O14907 124 aa9.1□□□□□ -0.95
FAM3A-220ENST00000497506 TPRXLQ17RH7 258 aa9.09□□□□□ -0.95
FAM3A-220ENST00000497506 UBR4Q5T4S7 5183 aa9.09□□□□□ -0.95
FAM3A-220ENST00000497506 C9orf118A6NHY6 69 aa9.08□□□□□ -0.96
FAM3A-220ENST00000497506 ATXN8Q156A1 80 aa9.08□□□□□ -0.96
FAM3A-220ENST00000497506 TRBV7-7A0A0K0K1E9 115 aa9.07□□□□□ -0.96
FAM3A-220ENST00000497506 UBE2V1Q13404 147 aa9.07□□□□□ -0.96
FAM3A-220ENST00000497506 LYRM7Q5U5X0 104 aa9.06□□□□□ -0.96
FAM3A-220ENST00000497506 BAALC-AS2P0C853 105 aa9.05□□□□□ -0.96
FAM3A-220ENST00000497506 KRTAP13-3Q3SY46 172 aa9.05□□□□□ -0.96
FAM3A-220ENST00000497506 C1orf195Q5TG92 126 aa9.04□□□□□ -0.96
FAM3A-220ENST00000497506 Q6Q795 121 aa9.04□□□□□ -0.96
FAM3A-220ENST00000497506 TRBV20-1A0A075B6N2 111 aa9.03□□□□□ -0.96
FAM3A-220ENST00000497506 TEN1Q86WV5 123 aa9.03□□□□□ -0.96
FAM3A-220ENST00000497506 A0A1B0GV72 72 aa9.02□□□□□ -0.97
FAM3A-220ENST00000497506 A0A1W2PPM0 123 aa9.02□□□□□ -0.97
FAM3A-220ENST00000497506 A0A1W2PNM2 257 aa9.01□□□□□ -0.97
FAM3A-220ENST00000497506 ASB16-AS1Q495Z4 193 aa9.01□□□□□ -0.97
FAM3A-220ENST00000497506 ANKRD29Q8N6D5 301 aa9.01□□□□□ -0.97
FAM3A-220ENST00000497506 PCP4L1A6NKN8 68 aa9□□□□□ -0.97
FAM3A-220ENST00000497506 CDIP1Q9H305 208 aa9□□□□□ -0.97
FAM3A-220ENST00000497506 COL5A1-AS1Q5SY13 56 aa8.99□□□□□ -0.97
FAM3A-220ENST00000497506 TRBV7-4A0A0J9YYF1 115 aa8.97□□□□□ -0.97
FAM3A-220ENST00000497506 RBM3P98179 157 aaKnown RBP8.97□□□□□ -0.97
FAM3A-220ENST00000497506 C9JAW5 83 aa8.96□□□□□ -0.98
FAM3A-220ENST00000497506 A0A087WSZ3 146 aa8.95□□□□□ -0.98
FAM3A-220ENST00000497506 SS18L2Q9UHA2 77 aa8.94□□□□□ -0.98
FAM3A-220ENST00000497506 CCKP06307 115 aa8.93□□□□□ -0.98
FAM3A-220ENST00000497506 DSCR8Q96T75 97 aa8.92□□□□□ -0.98
FAM3A-220ENST00000497506 SPCS1Q9Y6A9 102 aa8.91□□□□□ -0.98
FAM3A-220ENST00000497506 JMJD7-PLA2G4BH0Y9G9 81 aa8.9□□□□□ -0.98
FAM3A-220ENST00000497506 C9orf92A6NGG3 77 aa8.89□□□□□ -0.99
FAM3A-220ENST00000497506 H3BT86 120 aa8.88□□□□□ -0.99
FAM3A-220ENST00000497506 XP32Q5T750 250 aa8.88□□□□□ -0.99
FAM3A-220ENST00000497506 MTURNQ8N3F0 131 aa8.88□□□□□ -0.99
FAM3A-220ENST00000497506 OBSCN-AS1Q96MR7 158 aa8.88□□□□□ -0.99
FAM3A-220ENST00000497506 Q96NJ1 140 aa8.88□□□□□ -0.99
FAM3A-220ENST00000497506 VPS25Q9BRG1 176 aa8.87□□□□□ -0.99
FAM3A-220ENST00000497506 RNF213Q63HN8 5207 aa8.86□□□□□ -0.99
FAM3A-220ENST00000497506 LOC110117498A0A087WWA1 95 aa8.86□□□□□ -0.99
FAM3A-220ENST00000497506 Q6ZQT0 140 aa8.86□□□□□ -0.99
FAM3A-220ENST00000497506 MUC17Q685J3 4493 aa8.86□□□□□ -0.99
FAM3A-220ENST00000497506 C14orf132Q9NPU4 83 aa8.84□□□□□ -0.99
FAM3A-220ENST00000497506 K7EP34 96 aa8.83□□□□□ -1
FAM3A-220ENST00000497506 PDE6GP18545 87 aa8.82□□□□□ -1
FAM3A-220ENST00000497506 SMCPP49901 116 aaPredicted RBP8.81□□□□□ -1
FAM3A-220ENST00000497506 LINC00472Q9H8W2 130 aa8.81□□□□□ -1
FAM3A-220ENST00000497506 C21orf62-AS1Q17RA5 79 aa8.79□□□□□ -1
FAM3A-220ENST00000497506 PRO0461Q9UI25 63 aa8.79□□□□□ -1
FAM3A-220ENST00000497506 A0A1B0GW54 56 aa8.77□□□□□ -1.01
FAM3A-220ENST00000497506 SEC61BP60468 96 aaKnown RBP8.77□□□□□ -1.01
FAM3A-220ENST00000497506 DEFB116Q30KQ4 102 aa8.77□□□□□ -1.01
FAM3A-220ENST00000497506 IGKV4-1P06312 121 aa8.76□□□□□ -1.01
FAM3A-220ENST00000497506 SIGMAR1Q99720 223 aa8.76□□□□□ -1.01
FAM3A-220ENST00000497506 MUC2Q02817 5179 aa8.74□□□□□ -1.01
FAM3A-220ENST00000497506 GTF2H5Q6ZYL4 71 aa8.74□□□□□ -1.01
FAM3A-220ENST00000497506 RPL37P61927 97 aaKnown RBP8.72□□□□□ -1.01
FAM3A-220ENST00000497506 KRTAP4-1Q9BYQ7 146 aa8.71□□□□□ -1.02
FAM3A-220ENST00000497506 DSCR10P59022 87 aa8.69□□□□□ -1.02
FAM3A-220ENST00000497506 PCOTHQ58A44 107 aa8.69□□□□□ -1.02
FAM3A-220ENST00000497506 J3KT08 172 aa8.68□□□□□ -1.02
FAM3A-220ENST00000497506 F8W1H4 67 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms