RNA–Protein interactions for RNA: ENST00000496108.5

LYSMD4-209, Transcript of LysM domain containing 4, humanhuman

TSL 2

Gene LYSMD4, Length 2,222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-209ENST00000496108 CASC10Q5T4H9 136 aa12.96□□□□□ -0.33
LYSMD4-209ENST00000496108 B9D2Q9BPU9 175 aa12.96□□□□□ -0.33
LYSMD4-209ENST00000496108 C11orf45Q8TAV5 145 aa12.96□□□□□ -0.34
LYSMD4-209ENST00000496108 A0A087WSZ3 146 aa12.94□□□□□ -0.34
LYSMD4-209ENST00000496108 SEC61GP60059 68 aa12.94□□□□□ -0.34
LYSMD4-209ENST00000496108 ANK2Q01484 3957 aa12.94□□□□□ -0.34
LYSMD4-209ENST00000496108 A0A0G2JQZ4 141 aa12.93□□□□□ -0.34
LYSMD4-209ENST00000496108 A0A1W2PNN7 141 aa12.93□□□□□ -0.34
LYSMD4-209ENST00000496108 DEFB116Q30KQ4 102 aa12.93□□□□□ -0.34
LYSMD4-209ENST00000496108 LINC00208Q96KT6 92 aa12.93□□□□□ -0.34
LYSMD4-209ENST00000496108 PMAIP1Q13794 54 aa12.93□□□□□ -0.34
LYSMD4-209ENST00000496108 LINC00588Q9Y4M8 146 aa12.93□□□□□ -0.34
LYSMD4-209ENST00000496108 KRTAP10-11P60412 298 aa12.92□□□□□ -0.34
LYSMD4-209ENST00000496108 A8MUN3 132 aa12.9□□□□□ -0.34
LYSMD4-209ENST00000496108 H0Y9P7 68 aa12.89□□□□□ -0.35
LYSMD4-209ENST00000496108 OXLD1Q5BKU9 147 aa12.89□□□□□ -0.35
LYSMD4-209ENST00000496108 CASC2Q6XLA1 102 aa12.88□□□□□ -0.35
LYSMD4-209ENST00000496108 Q5VV11 94 aa12.87□□□□□ -0.35
LYSMD4-209ENST00000496108 RPL37AP61513 92 aaKnown RBP12.86□□□□□ -0.35
LYSMD4-209ENST00000496108 TRRAPQ9Y4A5 3859 aa12.85□□□□□ -0.35
LYSMD4-209ENST00000496108 PRLHP81277 87 aa12.85□□□□□ -0.35
LYSMD4-209ENST00000496108 LIMD2Q9BT23 127 aa12.85□□□□□ -0.35
LYSMD4-209ENST00000496108 CNBPP62633 177 aaKnown RBP12.84□□□□□ -0.35
LYSMD4-209ENST00000496108 PKD1L1Q8TDX9 2849 aa12.83□□□□□ -0.36
LYSMD4-209ENST00000496108 A8MWP4 228 aa12.82□□□□□ -0.36
LYSMD4-209ENST00000496108 UBE2AP49459 152 aa12.82□□□□□ -0.36
LYSMD4-209ENST00000496108 Q8N9P0 234 aaPredicted RBP12.82□□□□□ -0.36
LYSMD4-209ENST00000496108 C9orf163Q8N9P6 203 aa12.81□□□□□ -0.36
LYSMD4-209ENST00000496108 PRB2P02812 416 aaPredicted RBP12.81□□□□□ -0.36
LYSMD4-209ENST00000496108 DNAH1Q9P2D7 4330 aa12.8□□□□□ -0.36
LYSMD4-209ENST00000496108 C16orf90A8MZG2 172 aa12.8□□□□□ -0.36
LYSMD4-209ENST00000496108 SPRR1BP22528 89 aa12.8□□□□□ -0.36
LYSMD4-209ENST00000496108 LINC00472Q9H8W2 130 aa12.8□□□□□ -0.36
LYSMD4-209ENST00000496108 A0A096LNI7 61 aa12.77□□□□□ -0.36
LYSMD4-209ENST00000496108 H0Y9J4 135 aa12.74□□□□□ -0.37
LYSMD4-209ENST00000496108 TENM3Q9P273 2699 aa12.74□□□□□ -0.37
LYSMD4-209ENST00000496108 CHKB-CPT1BH3BT56 60 aa12.73□□□□□ -0.37
LYSMD4-209ENST00000496108 NBEAL1Q6ZS30 2694 aa12.72□□□□□ -0.37
LYSMD4-209ENST00000496108 IGKV2-24A0A0C4DH68 120 aa12.72□□□□□ -0.37
LYSMD4-209ENST00000496108 MGAM2Q2M2H8 2515 aa12.71□□□□□ -0.37
LYSMD4-209ENST00000496108 PRR15LQ9BU68 103 aa12.7□□□□□ -0.38
LYSMD4-209ENST00000496108 IGLV7-46A0A075B6I9 117 aa12.7□□□□□ -0.38
LYSMD4-209ENST00000496108 MMP24-AS1A0A0U1RRL7 71 aa12.69□□□□□ -0.38
LYSMD4-209ENST00000496108 A8MU10 97 aa12.69□□□□□ -0.38
LYSMD4-209ENST00000496108 Q75L30 129 aa12.69□□□□□ -0.38
LYSMD4-209ENST00000496108 LOC101927531A0A1B0GV80 90 aa12.68□□□□□ -0.38
LYSMD4-209ENST00000496108 COA5Q86WW8 74 aa12.67□□□□□ -0.38
LYSMD4-209ENST00000496108 FBN3Q75N90 2809 aa12.66□□□□□ -0.38
LYSMD4-209ENST00000496108 KRTAP11-1Q8IUC1 163 aa12.62□□□□□ -0.39
LYSMD4-209ENST00000496108 CMYA5Q8N3K9 4069 aa12.62□□□□□ -0.39
LYSMD4-209ENST00000496108 PHF5AQ7RTV0 110 aaKnown RBP12.61□□□□□ -0.39
LYSMD4-209ENST00000496108 CD164Q04900 197 aa12.61□□□□□ -0.39
LYSMD4-209ENST00000496108 ASB16-AS1Q495Z4 193 aa12.61□□□□□ -0.39
LYSMD4-209ENST00000496108 TP53AIP1Q9HCN2 124 aa12.61□□□□□ -0.39
LYSMD4-209ENST00000496108 ATP11AUNQ6ZP68 121 aa12.6□□□□□ -0.39
LYSMD4-209ENST00000496108 NOTCH1P46531 2555 aa12.59□□□□□ -0.39
LYSMD4-209ENST00000496108 MOBPQ13875 183 aa12.57□□□□□ -0.4
LYSMD4-209ENST00000496108 LCA10Q71F78 164 aa12.57□□□□□ -0.4
LYSMD4-209ENST00000496108 KTN1-AS1Q86SY8 53 aa12.56□□□□□ -0.4
LYSMD4-209ENST00000496108 A6NED7 52 aa12.55□□□□□ -0.4
LYSMD4-209ENST00000496108 KRTAP1-5Q9BYS1 174 aa12.55□□□□□ -0.4
LYSMD4-209ENST00000496108 C14orf177Q52M58 125 aa12.54□□□□□ -0.4
LYSMD4-209ENST00000496108 Q6ZR54 194 aa12.54□□□□□ -0.4
LYSMD4-209ENST00000496108 CHTF8P0CG12 524 aa12.53□□□□□ -0.4
LYSMD4-209ENST00000496108 Q96NJ1 140 aa12.53□□□□□ -0.4
LYSMD4-209ENST00000496108 LINC01558Q9Y6Z2 57 aa12.53□□□□□ -0.4
LYSMD4-209ENST00000496108 PLAC8Q9NZF1 115 aa12.52□□□□□ -0.41
LYSMD4-209ENST00000496108 DNAH3Q8TD57 4116 aa12.51□□□□□ -0.41
LYSMD4-209ENST00000496108 CDC42SE1Q9NRR8 79 aa12.51□□□□□ -0.41
LYSMD4-209ENST00000496108 PCOTHQ58A44 107 aa12.5□□□□□ -0.41
LYSMD4-209ENST00000496108 MEGF8Q7Z7M0 2845 aa12.5□□□□□ -0.41
LYSMD4-209ENST00000496108 KRTAP13-1Q8IUC0 172 aa12.5□□□□□ -0.41
LYSMD4-209ENST00000496108 SPTSSBQ8NFR3 76 aa12.5□□□□□ -0.41
LYSMD4-209ENST00000496108 C8orf17Q9NRJ1 99 aa12.48□□□□□ -0.41
LYSMD4-209ENST00000496108 A6NN06 94 aa12.46□□□□□ -0.42
LYSMD4-209ENST00000496108 NDUFS5O43920 106 aa12.46□□□□□ -0.42
LYSMD4-209ENST00000496108 SPAG11AQ6PDA7 123 aa12.41□□□□□ -0.42
LYSMD4-209ENST00000496108 A0A1B0GVX0 72 aa12.4□□□□□ -0.42
LYSMD4-209ENST00000496108 DNAH10Q8IVF4 4471 aa12.39□□□□□ -0.43
LYSMD4-209ENST00000496108 HRES1P13985 223 aa12.38□□□□□ -0.43
LYSMD4-209ENST00000496108 LINC00483Q53H64 154 aa12.38□□□□□ -0.43
LYSMD4-209ENST00000496108 IGLV9-49A0A0B4J1Y8 123 aa12.37□□□□□ -0.43
LYSMD4-209ENST00000496108 SRRM2Q9UQ35 2752 aaKnown RBP12.37□□□□□ -0.43
LYSMD4-209ENST00000496108 MRPL34Q9BQ48 92 aaKnown RBP12.36□□□□□ -0.43
LYSMD4-209ENST00000496108 IGHV6-1A0A0B4J1U7 121 aa12.35□□□□□ -0.43
LYSMD4-209ENST00000496108 UBE2DNLQ8IWF7 75 aa12.34□□□□□ -0.43
LYSMD4-209ENST00000496108 HUWE1Q7Z6Z7 4374 aaKnown RBP12.34□□□□□ -0.43
LYSMD4-209ENST00000496108 RBM12B-AS1Q9P1G2 102 aa12.34□□□□□ -0.43
LYSMD4-209ENST00000496108 CDK2AP2O75956 126 aa12.32□□□□□ -0.44
LYSMD4-209ENST00000496108 K7EIL1 84 aa12.31□□□□□ -0.44
LYSMD4-209ENST00000496108 TENM2Q9NT68 2774 aa12.31□□□□□ -0.44
LYSMD4-209ENST00000496108 PANO1I0J062 215 aa12.3□□□□□ -0.44
LYSMD4-209ENST00000496108 PRKDCP78527 4128 aaKnown RBP12.29□□□□□ -0.44
LYSMD4-209ENST00000496108 C7orf65Q6ZTY9 151 aa12.29□□□□□ -0.44
LYSMD4-209ENST00000496108 ZNF706Q9Y5V0 76 aaPredicted RBP12.29□□□□□ -0.44
LYSMD4-209ENST00000496108 SPINK7P58062 85 aa12.28□□□□□ -0.44
LYSMD4-209ENST00000496108 APLNQ9ULZ1 77 aa12.28□□□□□ -0.44
LYSMD4-209ENST00000496108 LYSTQ99698 3801 aa12.28□□□□□ -0.44
LYSMD4-209ENST00000496108 DNAH9Q9NYC9 4486 aa12.26□□□□□ -0.45
LYSMD4-209ENST00000496108 WWC2-AS2Q96NR7 200 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms