RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 ACANP16112 2415 aa3.14□□□□□ -1.91
NF1-216ENST00000495910 LINC00472Q9H8W2 130 aa3.13□□□□□ -1.91
NF1-216ENST00000495910 GOLGB1Q14789 3259 aaKnown RBP3.13□□□□□ -1.91
NF1-216ENST00000495910 PANO1I0J062 215 aa3.13□□□□□ -1.91
NF1-216ENST00000495910 K7EIL1 84 aa3.12□□□□□ -1.91
NF1-216ENST00000495910 POLQO75417 2590 aa3.12□□□□□ -1.91
NF1-216ENST00000495910 KRTAP10-11P60412 298 aa3.11□□□□□ -1.91
NF1-216ENST00000495910 A0A087X002 238 aa3.11□□□□□ -1.91
NF1-216ENST00000495910 TNP1P09430 55 aa3.11□□□□□ -1.91
NF1-216ENST00000495910 USP24Q9UPU5 2620 aa3.1□□□□□ -1.91
NF1-216ENST00000495910 A0A096LNT2 108 aa3.1□□□□□ -1.91
NF1-216ENST00000495910 KRTAP26-1Q6PEX3 210 aa3.1□□□□□ -1.91
NF1-216ENST00000495910 SPRR1BP22528 89 aa3.09□□□□□ -1.91
NF1-216ENST00000495910 EPG5Q9HCE0 2579 aa3.09□□□□□ -1.91
NF1-216ENST00000495910 A8MU10 97 aa3.09□□□□□ -1.92
NF1-216ENST00000495910 CFAP46Q8IYW2 2715 aa3.08□□□□□ -1.92
NF1-216ENST00000495910 P0C880 135 aa3.08□□□□□ -1.92
NF1-216ENST00000495910 PLAC8Q9NZF1 115 aa3.08□□□□□ -1.92
NF1-216ENST00000495910 Q5VSD8 79 aa3.08□□□□□ -1.92
NF1-216ENST00000495910 A8MUU9 505 aa3.08□□□□□ -1.92
NF1-216ENST00000495910 SPRR1AP35321 89 aa3.07□□□□□ -1.92
NF1-216ENST00000495910 HELZ2Q9BYK8 2649 aaKnown RBP3.07□□□□□ -1.92
NF1-216ENST00000495910 TRANK1O15050 2925 aa3.06□□□□□ -1.92
NF1-216ENST00000495910 FLNAP21333 2647 aaKnown RBP3.06□□□□□ -1.92
NF1-216ENST00000495910 KRTAP11-1Q8IUC1 163 aa3.04□□□□□ -1.92
NF1-216ENST00000495910 FLG2Q5D862 2391 aaPredicted RBP3.04□□□□□ -1.92
NF1-216ENST00000495910 ITPR3Q14573 2671 aa3.03□□□□□ -1.92
NF1-216ENST00000495910 C5orf42Q9H799 3197 aa3.03□□□□□ -1.93
NF1-216ENST00000495910 CENPEQ02224 2701 aa3.01□□□□□ -1.93
NF1-216ENST00000495910 UTRNP46939 3433 aa3.01□□□□□ -1.93
NF1-216ENST00000495910 KRTAP29-1A8MX34 341 aaPredicted RBP3.01□□□□□ -1.93
NF1-216ENST00000495910 KRTAP4-16G5E9R7 235 aaPredicted RBP3.01□□□□□ -1.93
NF1-216ENST00000495910 ITPR2Q14571 2701 aa3□□□□□ -1.93
NF1-216ENST00000495910 SRCAPQ6ZRS2 3230 aa2.99□□□□□ -1.93
NF1-216ENST00000495910 AKAP13Q12802 2813 aa2.99□□□□□ -1.93
NF1-216ENST00000495910 MAST4O15021 2626 aa2.98□□□□□ -1.93
NF1-216ENST00000495910 KRTAP10-3P60369 221 aa2.98□□□□□ -1.93
NF1-216ENST00000495910 ZNF292O60281 2723 aa2.97□□□□□ -1.93
NF1-216ENST00000495910 ATRQ13535 2644 aa2.95□□□□□ -1.94
NF1-216ENST00000495910 FLNBO75369 2602 aaKnown RBP2.94□□□□□ -1.94
NF1-216ENST00000495910 PCNTO95613 3336 aa2.94□□□□□ -1.94
NF1-216ENST00000495910 HECTD1Q9ULT8 2610 aa2.92□□□□□ -1.94
NF1-216ENST00000495910 TEX15Q9BXT5 2789 aa2.92□□□□□ -1.94
NF1-216ENST00000495910 CEP350Q5VT06 3117 aa2.92□□□□□ -1.94
NF1-216ENST00000495910 LCE6AA0A183 80 aa2.91□□□□□ -1.94
NF1-216ENST00000495910 RPS29P62273 56 aaKnown RBP2.91□□□□□ -1.94
NF1-216ENST00000495910 NOTCH2NLQ7Z3S9 236 aa2.91□□□□□ -1.94
NF1-216ENST00000495910 TEP1Q99973 2627 aaKnown RBP2.91□□□□□ -1.94
NF1-216ENST00000495910 KRTAP10-8P60410 259 aa2.9□□□□□ -1.94
NF1-216ENST00000495910 GCN1Q92616 2671 aaKnown RBP2.89□□□□□ -1.95
NF1-216ENST00000495910 LAMA2P24043 3122 aaKnown RBP2.88□□□□□ -1.95
NF1-216ENST00000495910 CHD7Q9P2D1 2997 aa2.88□□□□□ -1.95
NF1-216ENST00000495910 CHD6Q8TD26 2715 aa2.88□□□□□ -1.95
NF1-216ENST00000495910 KRTAP10-1P60331 282 aa2.88□□□□□ -1.95
NF1-216ENST00000495910 BAHCC1Q9P281 2608 aa2.88□□□□□ -1.95
NF1-216ENST00000495910 UNC79Q9P2D8 2635 aa2.88□□□□□ -1.95
NF1-216ENST00000495910 MGAM2Q2M2H8 2515 aa2.88□□□□□ -1.95
NF1-216ENST00000495910 USP34Q70CQ2 3546 aa2.87□□□□□ -1.95
NF1-216ENST00000495910 NBEAL1Q6ZS30 2694 aa2.87□□□□□ -1.95
NF1-216ENST00000495910 MAP1AP78559 2803 aaPredicted RBP2.84□□□□□ -1.95
NF1-216ENST00000495910 COL6A5A8TX70 2615 aa2.84□□□□□ -1.96
NF1-216ENST00000495910 PRO2289Q9P1D8 64 aa2.83□□□□□ -1.96
NF1-216ENST00000495910 KRTAP10-2P60368 255 aa2.83□□□□□ -1.96
NF1-216ENST00000495910 A0A0C4DFX4 3053 aa2.83□□□□□ -1.96
NF1-216ENST00000495910 VPS13AQ96RL7 3174 aa2.83□□□□□ -1.96
NF1-216ENST00000495910 FRYLO94915 3013 aa2.82□□□□□ -1.96
NF1-216ENST00000495910 SETXQ7Z333 2677 aaKnown RBP2.82□□□□□ -1.96
NF1-216ENST00000495910 STAB1Q9NY15 2570 aa2.82□□□□□ -1.96
NF1-216ENST00000495910 IGSF10Q6WRI0 2623 aa2.82□□□□□ -1.96
NF1-216ENST00000495910 CFAP54Q96N23 3096 aa2.81□□□□□ -1.96
NF1-216ENST00000495910 KRTAP1-5Q9BYS1 174 aa2.81□□□□□ -1.96
NF1-216ENST00000495910 MKI67P46013 3256 aaKnown RBP2.81□□□□□ -1.96
NF1-216ENST00000495910 Q6ZRN7 208 aaPredicted RBP2.81□□□□□ -1.96
NF1-216ENST00000495910 MGAQ8IWI9 3026 aa2.81□□□□□ -1.96
NF1-216ENST00000495910 APCP25054 2843 aa2.81□□□□□ -1.96
NF1-216ENST00000495910 UTP20O75691 2785 aaKnown RBP2.8□□□□□ -1.96
NF1-216ENST00000495910 TRIOO75962 3097 aa2.8□□□□□ -1.96
NF1-216ENST00000495910 CHD9Q3L8U1 2897 aa2.8□□□□□ -1.96
NF1-216ENST00000495910 H0YAA0 97 aa2.8□□□□□ -1.96
NF1-216ENST00000495910 KRTAP1-3Q8IUG1 177 aa2.79□□□□□ -1.96
NF1-216ENST00000495910 XIRP2A4UGR9 3374 aa2.79□□□□□ -1.96
NF1-216ENST00000495910 DSPP15924 2871 aaKnown RBP2.79□□□□□ -1.96
NF1-216ENST00000495910 NSD1Q96L73 2696 aaPredicted RBP2.78□□□□□ -1.96
NF1-216ENST00000495910 STAB2Q8WWQ8 2551 aa2.77□□□□□ -1.97
NF1-216ENST00000495910 KRTAP1-1Q07627 177 aa2.77□□□□□ -1.97
NF1-216ENST00000495910 HTTP42858 3142 aa2.77□□□□□ -1.97
NF1-216ENST00000495910 INE1O15225 51 aa2.76□□□□□ -1.97
NF1-216ENST00000495910 DMBT1Q9UGM3 2413 aaPredicted RBP2.76□□□□□ -1.97
NF1-216ENST00000495910 WDFY4Q6ZS81 3184 aa2.75□□□□□ -1.97
NF1-216ENST00000495910 PRUNE2Q8WUY3 3088 aa2.75□□□□□ -1.97
NF1-216ENST00000495910 NOTCH1P46531 2555 aa2.75□□□□□ -1.97
NF1-216ENST00000495910 LRBAP50851 2863 aa2.74□□□□□ -1.97
NF1-216ENST00000495910 RANBP2P49792 3224 aaKnown RBP2.74□□□□□ -1.97
NF1-216ENST00000495910 BRCA2P51587 3418 aa2.74□□□□□ -1.97
NF1-216ENST00000495910 KRTAP21-3Q3LHN1 58 aa2.74□□□□□ -1.97
NF1-216ENST00000495910 KRTAP13-2Q52LG2 175 aa2.73□□□□□ -1.97
NF1-216ENST00000495910 KRTAP12-2P59991 146 aa2.73□□□□□ -1.97
NF1-216ENST00000495910 A0A1B0GVY2 172 aa2.73□□□□□ -1.97
NF1-216ENST00000495910 LAMA1P25391 3075 aa2.73□□□□□ -1.97
NF1-216ENST00000495910 FRYQ5TBA9 3013 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 195.2 ms