RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 FP248Q71RG6 208 aaPredicted RBP12.41□□□□□ -0.42
HPS3-207ENST00000494327 TEX49A0A1B0GTD5 131 aa12.4□□□□□ -0.42
HPS3-207ENST00000494327 RPS29P62273 56 aaKnown RBP12.39□□□□□ -0.43
HPS3-207ENST00000494327 VAMP3Q15836 100 aa12.38□□□□□ -0.43
HPS3-207ENST00000494327 HRCT1Q6UXD1 115 aa12.38□□□□□ -0.43
HPS3-207ENST00000494327 Q8N377 158 aa12.38□□□□□ -0.43
HPS3-207ENST00000494327 SLC25A20O43772 301 aa12.36□□□□□ -0.43
HPS3-207ENST00000494327 PSMB2P49721 201 aa12.34□□□□□ -0.43
HPS3-207ENST00000494327 COL5A1-AS1Q5SY13 56 aa12.34□□□□□ -0.43
HPS3-207ENST00000494327 LINC01547P58512 204 aaPredicted RBP12.33□□□□□ -0.44
HPS3-207ENST00000494327 IGLV5-48A0A075B6I7 105 aa12.32□□□□□ -0.44
HPS3-207ENST00000494327 SMIM29Q86T20 159 aa12.32□□□□□ -0.44
HPS3-207ENST00000494327 LINC00575Q6W349 94 aa12.31□□□□□ -0.44
HPS3-207ENST00000494327 COX6CP09669 75 aa12.3□□□□□ -0.44
HPS3-207ENST00000494327 TAX1BP3O14907 124 aa12.29□□□□□ -0.44
HPS3-207ENST00000494327 TRIAP1O43715 76 aa12.29□□□□□ -0.44
HPS3-207ENST00000494327 H0YGX0 51 aa12.28□□□□□ -0.44
HPS3-207ENST00000494327 KRTAP13-3Q3SY46 172 aa12.28□□□□□ -0.44
HPS3-207ENST00000494327 hADV29S1A0JD25 119 aa12.27□□□□□ -0.45
HPS3-207ENST00000494327 C9orf118A6NHY6 69 aa12.26□□□□□ -0.45
HPS3-207ENST00000494327 SCGB1C2P0DMR2 95 aa12.26□□□□□ -0.45
HPS3-207ENST00000494327 NAA38Q9BRA0 125 aaKnown RBP12.26□□□□□ -0.45
HPS3-207ENST00000494327 LIMD2Q9BT23 127 aa12.26□□□□□ -0.45
HPS3-207ENST00000494327 A0A0G2JQZ4 141 aa12.24□□□□□ -0.45
HPS3-207ENST00000494327 H3BUT2 72 aa12.24□□□□□ -0.45
HPS3-207ENST00000494327 Q6ZQY7 126 aa12.24□□□□□ -0.45
HPS3-207ENST00000494327 CD164Q04900 197 aa12.22□□□□□ -0.45
HPS3-207ENST00000494327 F8WEM9 126 aa12.2□□□□□ -0.46
HPS3-207ENST00000494327 SNCGO76070 127 aa12.2□□□□□ -0.46
HPS3-207ENST00000494327 LYRM7Q5U5X0 104 aa12.2□□□□□ -0.46
HPS3-207ENST00000494327 MUC2Q02817 5179 aa12.18□□□□□ -0.46
HPS3-207ENST00000494327 CLEC2BQ92478 149 aa12.18□□□□□ -0.46
HPS3-207ENST00000494327 A0A1W2PPM0 123 aa12.17□□□□□ -0.46
HPS3-207ENST00000494327 A0A1B0GX51 115 aa12.16□□□□□ -0.46
HPS3-207ENST00000494327 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.16□□□□□ -0.46
HPS3-207ENST00000494327 FAM218AQ96MZ4 157 aa12.16□□□□□ -0.46
HPS3-207ENST00000494327 FABP2P12104 132 aa12.15□□□□□ -0.46
HPS3-207ENST00000494327 TRBV20-1A0A075B6N2 111 aa12.12□□□□□ -0.47
HPS3-207ENST00000494327 A0A0U1RQV1 116 aa12.12□□□□□ -0.47
HPS3-207ENST00000494327 LST1O00453 97 aa12.11□□□□□ -0.47
HPS3-207ENST00000494327 TCL1BO95988 128 aa12.11□□□□□ -0.47
HPS3-207ENST00000494327 ATXN8Q156A1 80 aa12.11□□□□□ -0.47
HPS3-207ENST00000494327 MUC17Q685J3 4493 aa12.1□□□□□ -0.47
HPS3-207ENST00000494327 DNAL4O96015 105 aa12.09□□□□□ -0.47
HPS3-207ENST00000494327 OCIAD2Q56VL3 154 aa12.09□□□□□ -0.47
HPS3-207ENST00000494327 Q5XG85 94 aa12.09□□□□□ -0.47
HPS3-207ENST00000494327 TRACP01848 142 aa12.08□□□□□ -0.48
HPS3-207ENST00000494327 ASB16-AS1Q495Z4 193 aa12.07□□□□□ -0.48
HPS3-207ENST00000494327 XP32Q5T750 250 aa12.07□□□□□ -0.48
HPS3-207ENST00000494327 Q6JHZ5 121 aa12.07□□□□□ -0.48
HPS3-207ENST00000494327 PPDPFLQ8WWR9 84 aa12.07□□□□□ -0.48
HPS3-207ENST00000494327 C9orf92A6NGG3 77 aa12.06□□□□□ -0.48
HPS3-207ENST00000494327 SEC61BP60468 96 aaKnown RBP12.06□□□□□ -0.48
HPS3-207ENST00000494327 C1orf195Q5TG92 126 aa12.06□□□□□ -0.48
HPS3-207ENST00000494327 SPCS1Q9Y6A9 102 aa12.06□□□□□ -0.48
HPS3-207ENST00000494327 IGLV8-61A0A075B6I0 122 aa12.05□□□□□ -0.48
HPS3-207ENST00000494327 IGFL1Q6UW32 110 aa12.05□□□□□ -0.48
HPS3-207ENST00000494327 GHRHP01286 108 aa12.04□□□□□ -0.48
HPS3-207ENST00000494327 ORMDL1Q9P0S3 153 aa12.01□□□□□ -0.49
HPS3-207ENST00000494327 H3BQ85 93 aa12□□□□□ -0.49
HPS3-207ENST00000494327 H3BMG7 143 aa11.99□□□□□ -0.49
HPS3-207ENST00000494327 K7EP34 96 aa11.99□□□□□ -0.49
HPS3-207ENST00000494327 GTF2H5Q6ZYL4 71 aa11.99□□□□□ -0.49
HPS3-207ENST00000494327 TRBV7-7A0A0K0K1E9 115 aa11.98□□□□□ -0.49
HPS3-207ENST00000494327 TMEM256-PLSCR3K7ERE1 68 aa11.96□□□□□ -0.49
HPS3-207ENST00000494327 C9JAW5 83 aa11.95□□□□□ -0.5
HPS3-207ENST00000494327 BAALC-AS2P0C853 105 aa11.95□□□□□ -0.5
HPS3-207ENST00000494327 NDUFV3P56181 108 aaKnown RBP11.95□□□□□ -0.5
HPS3-207ENST00000494327 KRTAP4-1Q9BYQ7 146 aa11.95□□□□□ -0.5
HPS3-207ENST00000494327 A0A1B0GV90 55 aa11.92□□□□□ -0.5
HPS3-207ENST00000494327 UBE2V1Q13404 147 aa11.89□□□□□ -0.51
HPS3-207ENST00000494327 FAT4Q6V0I7 4981 aa11.89□□□□□ -0.51
HPS3-207ENST00000494327 H3BT86 120 aa11.88□□□□□ -0.51
HPS3-207ENST00000494327 PCOTHQ58A44 107 aa11.88□□□□□ -0.51
HPS3-207ENST00000494327 MTURNQ8N3F0 131 aa11.87□□□□□ -0.51
HPS3-207ENST00000494327 ANKRD29Q8N6D5 301 aa11.85□□□□□ -0.51
HPS3-207ENST00000494327 TEN1Q86WV5 123 aa11.84□□□□□ -0.51
HPS3-207ENST00000494327 Q6Q795 121 aa11.83□□□□□ -0.52
HPS3-207ENST00000494327 F8W1H4 67 aa11.82□□□□□ -0.52
HPS3-207ENST00000494327 LCE2AQ5TA79 106 aaPredicted RBP11.82□□□□□ -0.52
HPS3-207ENST00000494327 PRO0461Q9UI25 63 aa11.82□□□□□ -0.52
HPS3-207ENST00000494327 A0A1B0GV72 72 aa11.81□□□□□ -0.52
HPS3-207ENST00000494327 SS18L2Q9UHA2 77 aa11.8□□□□□ -0.52
HPS3-207ENST00000494327 SMCPP49901 116 aaPredicted RBP11.79□□□□□ -0.52
HPS3-207ENST00000494327 A0A087WSZ3 146 aa11.78□□□□□ -0.52
HPS3-207ENST00000494327 JMJD7-PLA2G4BH0Y9G9 81 aa11.77□□□□□ -0.53
HPS3-207ENST00000494327 RPL37P61927 97 aaKnown RBP11.76□□□□□ -0.53
HPS3-207ENST00000494327 RBM3P98179 157 aaKnown RBP11.76□□□□□ -0.53
HPS3-207ENST00000494327 A0A1W2PNM2 257 aa11.74□□□□□ -0.53
HPS3-207ENST00000494327 OBSCN-AS1Q96MR7 158 aa11.74□□□□□ -0.53
HPS3-207ENST00000494327 DSCR8Q96T75 97 aa11.71□□□□□ -0.53
HPS3-207ENST00000494327 TRBV7-4A0A0J9YYF1 115 aa11.67□□□□□ -0.54
HPS3-207ENST00000494327 PDE6GP18545 87 aa11.65□□□□□ -0.54
HPS3-207ENST00000494327 ETDBQ3ZM63 59 aa11.65□□□□□ -0.54
HPS3-207ENST00000494327 Q96NJ1 140 aa11.65□□□□□ -0.54
HPS3-207ENST00000494327 C14orf132Q9NPU4 83 aa11.65□□□□□ -0.54
HPS3-207ENST00000494327 CCKP06307 115 aa11.64□□□□□ -0.55
HPS3-207ENST00000494327 LOC110117498A0A087WWA1 95 aa11.63□□□□□ -0.55
HPS3-207ENST00000494327 SIGMAR1Q99720 223 aa11.61□□□□□ -0.55
HPS3-207ENST00000494327 C21orf62-AS1Q17RA5 79 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms