RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 LINC00304Q8N9R0 145 aa10.4□□□□□ -0.74
PDLIM7-208ENST00000493815 LAMTOR3Q9UHA4 124 aa10.4□□□□□ -0.74
PDLIM7-208ENST00000493815 A0A1B0GV90 55 aa10.39□□□□□ -0.75
PDLIM7-208ENST00000493815 SCGB1C2P0DMR2 95 aa10.38□□□□□ -0.75
PDLIM7-208ENST00000493815 SNCGO76070 127 aa10.38□□□□□ -0.75
PDLIM7-208ENST00000493815 C21orf62-AS1Q17RA5 79 aa10.36□□□□□ -0.75
PDLIM7-208ENST00000493815 SSBP3-AS1Q7Z2R9 100 aa10.34□□□□□ -0.75
PDLIM7-208ENST00000493815 SNHG12Q9BXW3 62 aa10.34□□□□□ -0.75
PDLIM7-208ENST00000493815 A0A1B0GX51 115 aa10.34□□□□□ -0.75
PDLIM7-208ENST00000493815 A0A0G2JQZ4 141 aa10.33□□□□□ -0.76
PDLIM7-208ENST00000493815 C4orf48Q5BLP8 95 aa10.31□□□□□ -0.76
PDLIM7-208ENST00000493815 DNAL4O96015 105 aa10.31□□□□□ -0.76
PDLIM7-208ENST00000493815 H3BUT2 72 aa10.3□□□□□ -0.76
PDLIM7-208ENST00000493815 TAX1BP3O14907 124 aa10.3□□□□□ -0.76
PDLIM7-208ENST00000493815 LST1O00453 97 aa10.29□□□□□ -0.76
PDLIM7-208ENST00000493815 OCIAD2Q56VL3 154 aa10.29□□□□□ -0.76
PDLIM7-208ENST00000493815 HRCT1Q6UXD1 115 aa10.29□□□□□ -0.76
PDLIM7-208ENST00000493815 HMCN2Q8NDA2 5059 aa10.29□□□□□ -0.76
PDLIM7-208ENST00000493815 F8WEM9 126 aa10.28□□□□□ -0.76
PDLIM7-208ENST00000493815 FABP2P12104 132 aa10.28□□□□□ -0.76
PDLIM7-208ENST00000493815 PPDPFLQ8WWR9 84 aa10.28□□□□□ -0.76
PDLIM7-208ENST00000493815 SPAG11AQ6PDA7 123 aa10.28□□□□□ -0.76
PDLIM7-208ENST00000493815 TCL1BO95988 128 aa10.27□□□□□ -0.77
PDLIM7-208ENST00000493815 TRACP01848 142 aa10.26□□□□□ -0.77
PDLIM7-208ENST00000493815 RETNLBQ9BQ08 111 aa10.26□□□□□ -0.77
PDLIM7-208ENST00000493815 ORMDL1Q9P0S3 153 aa10.26□□□□□ -0.77
PDLIM7-208ENST00000493815 C9orf118A6NHY6 69 aa10.25□□□□□ -0.77
PDLIM7-208ENST00000493815 SPINK1P00995 79 aa10.25□□□□□ -0.77
PDLIM7-208ENST00000493815 NDUFV3P56181 108 aaKnown RBP10.24□□□□□ -0.77
PDLIM7-208ENST00000493815 ATXN8Q156A1 80 aa10.22□□□□□ -0.77
PDLIM7-208ENST00000493815 A0A1B0GV72 72 aa10.22□□□□□ -0.77
PDLIM7-208ENST00000493815 IGLV8-61A0A075B6I0 122 aa10.21□□□□□ -0.78
PDLIM7-208ENST00000493815 GHRHP01286 108 aa10.21□□□□□ -0.78
PDLIM7-208ENST00000493815 COL5A1-AS1Q5SY13 56 aa10.21□□□□□ -0.78
PDLIM7-208ENST00000493815 IGFL1Q6UW32 110 aa10.21□□□□□ -0.78
PDLIM7-208ENST00000493815 A0A1W2PPM0 123 aa10.2□□□□□ -0.78
PDLIM7-208ENST00000493815 PRR4Q16378 134 aa10.2□□□□□ -0.78
PDLIM7-208ENST00000493815 LYRM7Q5U5X0 104 aa10.19□□□□□ -0.78
PDLIM7-208ENST00000493815 H3BMG7 143 aa10.18□□□□□ -0.78
PDLIM7-208ENST00000493815 TMEM256-PLSCR3K7ERE1 68 aa10.18□□□□□ -0.78
PDLIM7-208ENST00000493815 Q6JHZ5 121 aa10.18□□□□□ -0.78
PDLIM7-208ENST00000493815 BAALC-AS2P0C853 105 aa10.17□□□□□ -0.78
PDLIM7-208ENST00000493815 TRBV20-1A0A075B6N2 111 aa10.16□□□□□ -0.78
PDLIM7-208ENST00000493815 RPS29P62273 56 aaKnown RBP10.15□□□□□ -0.78
PDLIM7-208ENST00000493815 CD164Q04900 197 aa10.15□□□□□ -0.78
PDLIM7-208ENST00000493815 H3BQ85 93 aa10.15□□□□□ -0.79
PDLIM7-208ENST00000493815 UBE2V1Q13404 147 aa10.13□□□□□ -0.79
PDLIM7-208ENST00000493815 C9JAW5 83 aa10.12□□□□□ -0.79
PDLIM7-208ENST00000493815 LPAP08519 4548 aa10.12□□□□□ -0.79
PDLIM7-208ENST00000493815 ANKRD29Q8N6D5 301 aa10.12□□□□□ -0.79
PDLIM7-208ENST00000493815 MTURNQ8N3F0 131 aa10.1□□□□□ -0.79
PDLIM7-208ENST00000493815 LIMD2Q9BT23 127 aa10.1□□□□□ -0.79
PDLIM7-208ENST00000493815 SPCS1Q9Y6A9 102 aa10.1□□□□□ -0.79
PDLIM7-208ENST00000493815 LRP2P98164 4655 aa10.09□□□□□ -0.79
PDLIM7-208ENST00000493815 TRBV7-7A0A0K0K1E9 115 aa10.08□□□□□ -0.8
PDLIM7-208ENST00000493815 IGLV7-46A0A075B6I9 117 aa10.07□□□□□ -0.8
PDLIM7-208ENST00000493815 A0A1W2PNM2 257 aa10.05□□□□□ -0.8
PDLIM7-208ENST00000493815 RBM3P98179 157 aaKnown RBP10.05□□□□□ -0.8
PDLIM7-208ENST00000493815 Q5XG85 94 aa10.04□□□□□ -0.8
PDLIM7-208ENST00000493815 TEN1Q86WV5 123 aa10.04□□□□□ -0.8
PDLIM7-208ENST00000493815 FP248Q71RG6 208 aaPredicted RBP10.02□□□□□ -0.8
PDLIM7-208ENST00000493815 Q6Q795 121 aa10.02□□□□□ -0.81
PDLIM7-208ENST00000493815 TRBV7-4A0A0J9YYF1 115 aa10.01□□□□□ -0.81
PDLIM7-208ENST00000493815 C1orf195Q5TG92 126 aa10.01□□□□□ -0.81
PDLIM7-208ENST00000493815 A0A087WSZ3 146 aa10□□□□□ -0.81
PDLIM7-208ENST00000493815 K7EP34 96 aa10□□□□□ -0.81
PDLIM7-208ENST00000493815 CCKP06307 115 aa10□□□□□ -0.81
PDLIM7-208ENST00000493815 DSCR8Q96T75 97 aa10□□□□□ -0.81
PDLIM7-208ENST00000493815 VPS25Q9BRG1 176 aa9.99□□□□□ -0.81
PDLIM7-208ENST00000493815 UBR4Q5T4S7 5183 aa9.98□□□□□ -0.81
PDLIM7-208ENST00000493815 H3BT86 120 aa9.98□□□□□ -0.81
PDLIM7-208ENST00000493815 JMJD7-PLA2G4BH0Y9G9 81 aa9.97□□□□□ -0.81
PDLIM7-208ENST00000493815 C14orf132Q9NPU4 83 aa9.96□□□□□ -0.81
PDLIM7-208ENST00000493815 SMCPP49901 116 aaPredicted RBP9.96□□□□□ -0.82
PDLIM7-208ENST00000493815 TPRXLQ17RH7 258 aa9.95□□□□□ -0.82
PDLIM7-208ENST00000493815 ASB16-AS1Q495Z4 193 aa9.94□□□□□ -0.82
PDLIM7-208ENST00000493815 OBSCN-AS1Q96MR7 158 aa9.94□□□□□ -0.82
PDLIM7-208ENST00000493815 KRTAP13-3Q3SY46 172 aa9.93□□□□□ -0.82
PDLIM7-208ENST00000493815 Q6ZQT0 140 aa9.93□□□□□ -0.82
PDLIM7-208ENST00000493815 SS18L2Q9UHA2 77 aa9.93□□□□□ -0.82
PDLIM7-208ENST00000493815 PRO0461Q9UI25 63 aa9.93□□□□□ -0.82
PDLIM7-208ENST00000493815 GTF2H5Q6ZYL4 71 aa9.92□□□□□ -0.82
PDLIM7-208ENST00000493815 CDIP1Q9H305 208 aa9.91□□□□□ -0.82
PDLIM7-208ENST00000493815 LOC110117498A0A087WWA1 95 aa9.9□□□□□ -0.82
PDLIM7-208ENST00000493815 C9orf92A6NGG3 77 aa9.87□□□□□ -0.83
PDLIM7-208ENST00000493815 Q96NJ1 140 aa9.87□□□□□ -0.83
PDLIM7-208ENST00000493815 PDE6GP18545 87 aa9.85□□□□□ -0.83
PDLIM7-208ENST00000493815 DEFB116Q30KQ4 102 aa9.84□□□□□ -0.83
PDLIM7-208ENST00000493815 SCGB1A1P11684 91 aa9.83□□□□□ -0.84
PDLIM7-208ENST00000493815 LINC00472Q9H8W2 130 aa9.8□□□□□ -0.84
PDLIM7-208ENST00000493815 F8W1H4 67 aa9.8□□□□□ -0.84
PDLIM7-208ENST00000493815 IGKV4-1P06312 121 aa9.79□□□□□ -0.84
PDLIM7-208ENST00000493815 XP32Q5T750 250 aa9.79□□□□□ -0.84
PDLIM7-208ENST00000493815 SIGMAR1Q99720 223 aa9.79□□□□□ -0.84
PDLIM7-208ENST00000493815 RNF213Q63HN8 5207 aa9.78□□□□□ -0.84
PDLIM7-208ENST00000493815 K7ERU9 68 aa9.77□□□□□ -0.85
PDLIM7-208ENST00000493815 ETDBQ3ZM63 59 aa9.77□□□□□ -0.85
PDLIM7-208ENST00000493815 A0A1B0GW54 56 aa9.74□□□□□ -0.85
PDLIM7-208ENST00000493815 NREPQ16612 68 aa9.7□□□□□ -0.86
PDLIM7-208ENST00000493815 DSCR10P59022 87 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms