RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 SPRR2AP35326 72 aa0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 SNHG12Q9BXW3 62 aa0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 TIMM8BQ9Y5J9 83 aaPredicted RBP0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 MYH6P13533 1939 aa0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 KMT2AQ03164 3969 aa0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 ANKARQ7Z5J8 1434 aa0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 URB1O60287 2271 aaKnown RBP0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 MAP3K1Q13233 1512 aa0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 ADAMTS12P58397 1594 aa0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 CICQ96RK0 1608 aaPredicted RBP0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 PTPN23Q9H3S7 1636 aa0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 TNRC6CQ9HCJ0 1690 aaKnown RBP0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 QSER1Q2KHR3 1735 aa0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 BTAF1O14981 1849 aa0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 ZNF236Q9UL36 1845 aa0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 PDCD11Q14690 1871 aaKnown RBP0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 MYO7BQ6PIF6 2116 aa0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 MYO15AQ9UKN7 3530 aa0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 H3BNG1 76 aa0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 NDUFA4O00483 81 aa0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 IFI6P09912 130 aa0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 LINC00158P58513 81 aa0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 BVES-AS1Q5T3Y7 98 aa0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 C20orf78Q9BR46 151 aa0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 NCOA2Q15596 1464 aa0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 KIAA0586Q9BVV6 1533 aa0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 DCAF1Q9Y4B6 1507 aa0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 PLXNC1O60486 1568 aa0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 TIAM2Q8IVF5 1701 aa0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 ANKRD26Q9UPS8 1709 aa0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 DOCK11Q5JSL3 2073 aa0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 DNAJC13O75165 2243 aa0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 FAT1Q14517 4588 aa0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 SRRM2Q9UQ35 2752 aaKnown RBP0□□□□□ -2.41
PRPF4B-207ENST00000490399 DEFB131BA0A096LNP1 70 aa0□□□□□ -2.41
PRPF4B-207ENST00000490399 LCE6AA0A183 80 aa0□□□□□ -2.41
PRPF4B-207ENST00000490399 H3BUA1 57 aa0□□□□□ -2.41
PRPF4B-207ENST00000490399 PIK3C2BO00750 1634 aa0□□□□□ -2.41
PRPF4B-207ENST00000490399 NDUFA3O95167 84 aa0□□□□□ -2.41
PRPF4B-207ENST00000490399 IAPPP10997 89 aa0□□□□□ -2.41
PRPF4B-207ENST00000490399 NESP48681 1621 aa0□□□□□ -2.41
PRPF4B-207ENST00000490399 AKAP12Q02952 1782 aa0□□□□□ -2.41
PRPF4B-207ENST00000490399 PSME4Q14997 1843 aa0□□□□□ -2.41
PRPF4B-207ENST00000490399 NREPQ16612 68 aa0□□□□□ -2.41
PRPF4B-207ENST00000490399 SVEP1Q4LDE5 3571 aa0□□□□□ -2.41
PRPF4B-207ENST00000490399 NEXMIFQ5QGS0 1516 aa0□□□□□ -2.41
PRPF4B-207ENST00000490399 NIPBLQ6KC79 2804 aaeCLIP0□□□□□ -2.41
PRPF4B-207ENST00000490399 SUPT6HQ7KZ85 1726 aaKnown RBP0□□□□□ -2.41
PRPF4B-207ENST00000490399 KIF20BQ96Q89 1820 aa0□□□□□ -2.41
PRPF4B-207ENST00000490399 ST20Q9HBF5 79 aa0□□□□□ -2.41
PRPF4B-207ENST00000490399 FMN2Q9NZ56 1722 aa0□□□□□ -2.41
PRPF4B-207ENST00000490399 RRBP1Q9P2E9 1410 aaKnown RBP0□□□□□ -2.41
PRPF4B-207ENST00000490399 BRCA2P51587 3418 aa-0□□□□□ -2.41
PRPF4B-207ENST00000490399 CENPFP49454 3210 aa-0□□□□□ -2.41
PRPF4B-207ENST00000490399 LRBAP50851 2863 aa-0□□□□□ -2.41
PRPF4B-207ENST00000490399 PCNX1Q96RV3 2341 aa-0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 USP32Q8NFA0 1604 aa-0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 SMARCA2P51531 1590 aa-0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 CFAP74Q9C0B2 1584 aa-0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 LMTK2Q8IWU2 1503 aa-0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 SMIM13P0DJ93 91 aa-0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 PRLHP81277 87 aa-0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 SERF2P84101 59 aa-0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 DEFB106AQ8N104 65 aa-0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 NOP10Q9NPE3 64 aaKnown RBP-0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 MTORP42345 2549 aa-0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 CNOT1A5YKK6 2376 aaKnown RBP-0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 DMXL2Q8TDJ6 3036 aa-0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 CRYBG3Q68DQ2 2970 aa-0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 UBR3Q6ZT12 1888 aa-0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 PLXNB2O15031 1838 aa-0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 CUBNO60494 3623 aa-0.01□□□□□ -2.41
PRPF4B-207ENST00000490399 COL4A6Q14031 1691 aa-0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 FREM2Q5SZK8 3169 aa-0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 DIP2BQ9P265 1576 aa-0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 USF3Q68DE3 2245 aa-0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 ARHGAP35Q9NRY4 1499 aa-0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 RANBP2P49792 3224 aaKnown RBP-0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 LYNX1G3V0Z9 82 aa-0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 H3BVH4 76 aa-0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 DEFA5Q01523 94 aa-0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 ATXN8Q156A1 80 aa-0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 MINOS1Q5TGZ0 78 aa-0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 ABRACLQ9P1F3 81 aa-0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 GNG13Q9P2W3 67 aa-0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 CSPG4Q6UVK1 2322 aa-0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 CFAP43Q8NDM7 1665 aa-0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 INO80Q9ULG1 1556 aaPredicted RBP-0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 DNAH12Q6ZR08 3092 aa-0.02□□□□□ -2.41
PRPF4B-207ENST00000490399 APOBP04114 4563 aaKnown RBP-0.03□□□□□ -2.41
PRPF4B-207ENST00000490399 ERVK-7P63135 1459 aa-0.03□□□□□ -2.41
PRPF4B-207ENST00000490399 CSMD3Q7Z407 3707 aa-0.03□□□□□ -2.41
PRPF4B-207ENST00000490399 LTN1O94822 1766 aa-0.03□□□□□ -2.41
PRPF4B-207ENST00000490399 RGPD2P0DJD1 1756 aa-0.03□□□□□ -2.41
PRPF4B-207ENST00000490399 HECTD4Q9Y4D8 3996 aa-0.03□□□□□ -2.41
PRPF4B-207ENST00000490399 ASPMQ8IZT6 3477 aa-0.03□□□□□ -2.41
PRPF4B-207ENST00000490399 POLR1AO95602 1720 aaPredicted RBP-0.03□□□□□ -2.41
PRPF4B-207ENST00000490399 C4AP0C0L4 1744 aa-0.03□□□□□ -2.41
PRPF4B-207ENST00000490399 C4BP0C0L5 1744 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms