RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 B5MCH6 92 aa5.55□□□□□ -1.52
TMEM39A-210ENST00000490099 IGLV6-57P01721 117 aa5.55□□□□□ -1.52
TMEM39A-210ENST00000490099 Q1RN00 199 aa5.55□□□□□ -1.52
TMEM39A-210ENST00000490099 K7ERJ3 54 aa5.54□□□□□ -1.52
TMEM39A-210ENST00000490099 KRTAP3-1Q9BYR8 98 aa5.54□□□□□ -1.52
TMEM39A-210ENST00000490099 TRAV23DV6A0A075B6W5 121 aa5.53□□□□□ -1.52
TMEM39A-210ENST00000490099 ETDCA0A1B0GVM5 59 aa5.53□□□□□ -1.52
TMEM39A-210ENST00000490099 ERC2-IT1O76042 136 aa5.53□□□□□ -1.52
TMEM39A-210ENST00000490099 Q9BRP9 147 aa5.53□□□□□ -1.52
TMEM39A-210ENST00000490099 H7C2G1 150 aa5.52□□□□□ -1.53
TMEM39A-210ENST00000490099 COX6CP09669 75 aa5.52□□□□□ -1.53
TMEM39A-210ENST00000490099 LYRM7Q5U5X0 104 aa5.52□□□□□ -1.53
TMEM39A-210ENST00000490099 Q6ZRX8 168 aa5.52□□□□□ -1.53
TMEM39A-210ENST00000490099 FP248Q71RG6 208 aaPredicted RBP5.52□□□□□ -1.53
TMEM39A-210ENST00000490099 A0A0U1RQV1 116 aa5.51□□□□□ -1.53
TMEM39A-210ENST00000490099 SPINK1P00995 79 aa5.51□□□□□ -1.53
TMEM39A-210ENST00000490099 PSMB2P49721 201 aa5.51□□□□□ -1.53
TMEM39A-210ENST00000490099 VAMP3Q15836 100 aa5.51□□□□□ -1.53
TMEM39A-210ENST00000490099 Q8NBF4 154 aa5.51□□□□□ -1.53
TMEM39A-210ENST00000490099 TRBV7-6A0A0J9YX20 115 aa5.5□□□□□ -1.53
TMEM39A-210ENST00000490099 ZNF73O43830 326 aaPredicted RBP5.5□□□□□ -1.53
TMEM39A-210ENST00000490099 RPS29P62273 56 aaKnown RBP5.5□□□□□ -1.53
TMEM39A-210ENST00000490099 SSBP3-AS1Q7Z2R9 100 aa5.5□□□□□ -1.53
TMEM39A-210ENST00000490099 SMIM11BQ8TCY0 68 aa5.5□□□□□ -1.53
TMEM39A-210ENST00000490099 TAX1BP3O14907 124 aa5.49□□□□□ -1.53
TMEM39A-210ENST00000490099 SNCGO76070 127 aa5.49□□□□□ -1.53
TMEM39A-210ENST00000490099 KRTAP13-3Q3SY46 172 aa5.49□□□□□ -1.53
TMEM39A-210ENST00000490099 GAGE2AQ6NT46 116 aa5.49□□□□□ -1.53
TMEM39A-210ENST00000490099 H0YGX0 51 aa5.48□□□□□ -1.53
TMEM39A-210ENST00000490099 C6orf99Q4VX62 202 aa5.48□□□□□ -1.53
TMEM39A-210ENST00000490099 MUC17Q685J3 4493 aa5.47□□□□□ -1.53
TMEM39A-210ENST00000490099 H3BUT2 72 aa5.47□□□□□ -1.53
TMEM39A-210ENST00000490099 TRIAP1O43715 76 aa5.47□□□□□ -1.53
TMEM39A-210ENST00000490099 SCGB1C2P0DMR2 95 aa5.47□□□□□ -1.53
TMEM39A-210ENST00000490099 FABP2P12104 132 aa5.47□□□□□ -1.53
TMEM39A-210ENST00000490099 COX7BP24311 80 aa5.47□□□□□ -1.53
TMEM39A-210ENST00000490099 A0A1W2PPM0 123 aa5.46□□□□□ -1.54
TMEM39A-210ENST00000490099 SLC25A20O43772 301 aa5.46□□□□□ -1.54
TMEM39A-210ENST00000490099 ELOF1P60002 83 aaKnown RBP5.46□□□□□ -1.54
TMEM39A-210ENST00000490099 MOBPQ13875 183 aa5.46□□□□□ -1.54
TMEM39A-210ENST00000490099 Q8N377 158 aa5.46□□□□□ -1.54
TMEM39A-210ENST00000490099 FAT4Q6V0I7 4981 aa5.45□□□□□ -1.54
TMEM39A-210ENST00000490099 TRBV20-1A0A075B6N2 111 aa5.45□□□□□ -1.54
TMEM39A-210ENST00000490099 A0A1B0GX51 115 aa5.45□□□□□ -1.54
TMEM39A-210ENST00000490099 SPRR1BP22528 89 aa5.45□□□□□ -1.54
TMEM39A-210ENST00000490099 DHRS4-AS1Q9P1J3 65 aa5.45□□□□□ -1.54
TMEM39A-210ENST00000490099 ASB16-AS1Q495Z4 193 aa5.44□□□□□ -1.54
TMEM39A-210ENST00000490099 NAA38Q9BRA0 125 aaKnown RBP5.44□□□□□ -1.54
TMEM39A-210ENST00000490099 KRTAP9-3Q9BYQ3 159 aa5.44□□□□□ -1.54
TMEM39A-210ENST00000490099 IGLV9-49A0A0B4J1Y8 123 aa5.43□□□□□ -1.54
TMEM39A-210ENST00000490099 ATXN8Q156A1 80 aa5.43□□□□□ -1.54
TMEM39A-210ENST00000490099 ST20-AS1Q8NBB2 130 aa5.43□□□□□ -1.54
TMEM39A-210ENST00000490099 DNAL4O96015 105 aa5.42□□□□□ -1.54
TMEM39A-210ENST00000490099 LINC00575Q6W349 94 aa5.42□□□□□ -1.54
TMEM39A-210ENST00000490099 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
TMEM39A-210ENST00000490099 hADV29S1A0JD25 119 aa5.41□□□□□ -1.54
TMEM39A-210ENST00000490099 LST1O00453 97 aa5.41□□□□□ -1.54
TMEM39A-210ENST00000490099 TRACP01848 142 aa5.41□□□□□ -1.54
TMEM39A-210ENST00000490099 GTF2H5Q6ZYL4 71 aa5.41□□□□□ -1.54
TMEM39A-210ENST00000490099 CLEC2BQ92478 149 aa5.41□□□□□ -1.54
TMEM39A-210ENST00000490099 SPCS1Q9Y6A9 102 aa5.41□□□□□ -1.54
TMEM39A-210ENST00000490099 H3BQ85 93 aa5.4□□□□□ -1.54
TMEM39A-210ENST00000490099 TCL1BO95988 128 aa5.4□□□□□ -1.54
TMEM39A-210ENST00000490099 KRTAP23-1A1A580 65 aa5.39□□□□□ -1.55
TMEM39A-210ENST00000490099 K7EP34 96 aa5.39□□□□□ -1.55
TMEM39A-210ENST00000490099 OCIAD2Q56VL3 154 aa5.39□□□□□ -1.55
TMEM39A-210ENST00000490099 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.39□□□□□ -1.55
TMEM39A-210ENST00000490099 KRTAP4-1Q9BYQ7 146 aa5.39□□□□□ -1.55
TMEM39A-210ENST00000490099 FAM218AQ96MZ4 157 aa5.38□□□□□ -1.55
TMEM39A-210ENST00000490099 SEC61BP60468 96 aaKnown RBP5.37□□□□□ -1.55
TMEM39A-210ENST00000490099 PPDPFLQ8WWR9 84 aa5.37□□□□□ -1.55
TMEM39A-210ENST00000490099 KRTAP4-9Q9BYQ8 210 aa5.37□□□□□ -1.55
TMEM39A-210ENST00000490099 ORMDL1Q9P0S3 153 aa5.37□□□□□ -1.55
TMEM39A-210ENST00000490099 H3BMG7 143 aa5.36□□□□□ -1.55
TMEM39A-210ENST00000490099 C9orf153Q5TBE3 101 aa5.36□□□□□ -1.55
TMEM39A-210ENST00000490099 Q6ZQY7 126 aa5.36□□□□□ -1.55
TMEM39A-210ENST00000490099 IGLV5-48A0A075B6I7 105 aa5.35□□□□□ -1.55
TMEM39A-210ENST00000490099 A0A1B0GV90 55 aa5.35□□□□□ -1.55
TMEM39A-210ENST00000490099 LINC01547P58512 204 aaPredicted RBP5.35□□□□□ -1.55
TMEM39A-210ENST00000490099 CD164Q04900 197 aa5.35□□□□□ -1.55
TMEM39A-210ENST00000490099 LCE5AQ5TCM9 118 aa5.35□□□□□ -1.55
TMEM39A-210ENST00000490099 Q5XG85 94 aa5.35□□□□□ -1.55
TMEM39A-210ENST00000490099 SMIM29Q86T20 159 aa5.35□□□□□ -1.55
TMEM39A-210ENST00000490099 LAMTOR3Q9UHA4 124 aa5.35□□□□□ -1.55
TMEM39A-210ENST00000490099 TEX49A0A1B0GTD5 131 aa5.34□□□□□ -1.55
TMEM39A-210ENST00000490099 C9JAW5 83 aa5.34□□□□□ -1.55
TMEM39A-210ENST00000490099 TMEM256-PLSCR3K7ERE1 68 aa5.34□□□□□ -1.55
TMEM39A-210ENST00000490099 H3BT86 120 aa5.33□□□□□ -1.56
TMEM39A-210ENST00000490099 UBE2V1Q13404 147 aa5.33□□□□□ -1.56
TMEM39A-210ENST00000490099 BAALC-AS2P0C853 105 aa5.32□□□□□ -1.56
TMEM39A-210ENST00000490099 DEFB105AQ8NG35 78 aa5.32□□□□□ -1.56
TMEM39A-210ENST00000490099 LIMD2Q9BT23 127 aa5.32□□□□□ -1.56
TMEM39A-210ENST00000490099 F8W1H4 67 aa5.31□□□□□ -1.56
TMEM39A-210ENST00000490099 F8WEM9 126 aa5.3□□□□□ -1.56
TMEM39A-210ENST00000490099 KRTAP19-2Q3LHN2 52 aa5.3□□□□□ -1.56
TMEM39A-210ENST00000490099 ANKRD29Q8N6D5 301 aa5.3□□□□□ -1.56
TMEM39A-210ENST00000490099 HRCT1Q6UXD1 115 aa5.29□□□□□ -1.56
TMEM39A-210ENST00000490099 PRO0461Q9UI25 63 aa5.28□□□□□ -1.56
TMEM39A-210ENST00000490099 JMJD7-PLA2G4BH0Y9G9 81 aa5.27□□□□□ -1.57
TMEM39A-210ENST00000490099 NDUFV3P56181 108 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms