RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 TSTD3H0UI37 97 aa6.35□□□□□ -1.39
CPSF7-212ENST00000489728 M0R143 59 aa6.35□□□□□ -1.39
CPSF7-212ENST00000489728 CD164Q04900 197 aa6.35□□□□□ -1.39
CPSF7-212ENST00000489728 PRR4Q16378 134 aa6.35□□□□□ -1.39
CPSF7-212ENST00000489728 FP248Q71RG6 208 aaPredicted RBP6.35□□□□□ -1.39
CPSF7-212ENST00000489728 F8WEM9 126 aa6.34□□□□□ -1.39
CPSF7-212ENST00000489728 TRIAP1O43715 76 aa6.34□□□□□ -1.39
CPSF7-212ENST00000489728 COX6CP09669 75 aa6.34□□□□□ -1.39
CPSF7-212ENST00000489728 K7ERJ3 54 aa6.33□□□□□ -1.4
CPSF7-212ENST00000489728 IGLV8-61A0A075B6I0 122 aa6.32□□□□□ -1.4
CPSF7-212ENST00000489728 PSMB2P49721 201 aa6.32□□□□□ -1.4
CPSF7-212ENST00000489728 FAM218AQ96MZ4 157 aa6.32□□□□□ -1.4
CPSF7-212ENST00000489728 LIMD2Q9BT23 127 aa6.32□□□□□ -1.4
CPSF7-212ENST00000489728 LRP2P98164 4655 aa6.32□□□□□ -1.4
CPSF7-212ENST00000489728 H3BQ85 93 aa6.31□□□□□ -1.4
CPSF7-212ENST00000489728 Q6JHZ5 121 aa6.31□□□□□ -1.4
CPSF7-212ENST00000489728 Q5XG85 94 aa6.3□□□□□ -1.4
CPSF7-212ENST00000489728 IGLV7-46A0A075B6I9 117 aa6.29□□□□□ -1.4
CPSF7-212ENST00000489728 TPRXLQ17RH7 258 aa6.29□□□□□ -1.4
CPSF7-212ENST00000489728 RETNLBQ9BQ08 111 aa6.29□□□□□ -1.4
CPSF7-212ENST00000489728 SNHG12Q9BXW3 62 aa6.29□□□□□ -1.4
CPSF7-212ENST00000489728 DNAL4O96015 105 aa6.28□□□□□ -1.4
CPSF7-212ENST00000489728 CLEC2BQ92478 149 aa6.28□□□□□ -1.4
CPSF7-212ENST00000489728 TRACP01848 142 aa6.26□□□□□ -1.41
CPSF7-212ENST00000489728 UBR4Q5T4S7 5183 aa6.25□□□□□ -1.41
CPSF7-212ENST00000489728 NDUFV3P56181 108 aaKnown RBP6.25□□□□□ -1.41
CPSF7-212ENST00000489728 ORMDL1Q9P0S3 153 aa6.25□□□□□ -1.41
CPSF7-212ENST00000489728 TMEM256-PLSCR3K7ERE1 68 aa6.24□□□□□ -1.41
CPSF7-212ENST00000489728 LST1O00453 97 aa6.24□□□□□ -1.41
CPSF7-212ENST00000489728 IGFL1Q6UW32 110 aa6.24□□□□□ -1.41
CPSF7-212ENST00000489728 HRCT1Q6UXD1 115 aa6.24□□□□□ -1.41
CPSF7-212ENST00000489728 TCL1BO95988 128 aa6.23□□□□□ -1.41
CPSF7-212ENST00000489728 SCGB1C2P0DMR2 95 aa6.23□□□□□ -1.41
CPSF7-212ENST00000489728 LYRM7Q5U5X0 104 aa6.23□□□□□ -1.41
CPSF7-212ENST00000489728 FABP2P12104 132 aa6.22□□□□□ -1.41
CPSF7-212ENST00000489728 ASB16-AS1Q495Z4 193 aa6.22□□□□□ -1.41
CPSF7-212ENST00000489728 Q6Q795 121 aa6.22□□□□□ -1.41
CPSF7-212ENST00000489728 LPAP08519 4548 aa6.22□□□□□ -1.41
CPSF7-212ENST00000489728 TRBV7-7A0A0K0K1E9 115 aa6.21□□□□□ -1.42
CPSF7-212ENST00000489728 H3BMG7 143 aa6.21□□□□□ -1.42
CPSF7-212ENST00000489728 KRTAP13-3Q3SY46 172 aa6.21□□□□□ -1.42
CPSF7-212ENST00000489728 H3BUT2 72 aa6.2□□□□□ -1.42
CPSF7-212ENST00000489728 UBE2V1Q13404 147 aa6.2□□□□□ -1.42
CPSF7-212ENST00000489728 CDIP1Q9H305 208 aa6.2□□□□□ -1.42
CPSF7-212ENST00000489728 A0A0G2JQZ4 141 aa6.19□□□□□ -1.42
CPSF7-212ENST00000489728 ATXN8Q156A1 80 aa6.19□□□□□ -1.42
CPSF7-212ENST00000489728 TEN1Q86WV5 123 aa6.19□□□□□ -1.42
CPSF7-212ENST00000489728 TRBV20-1A0A075B6N2 111 aa6.17□□□□□ -1.42
CPSF7-212ENST00000489728 BATFQ16520 125 aa6.17□□□□□ -1.42
CPSF7-212ENST00000489728 C1orf195Q5TG92 126 aa6.17□□□□□ -1.42
CPSF7-212ENST00000489728 SS18L2Q9UHA2 77 aa6.17□□□□□ -1.42
CPSF7-212ENST00000489728 TRBV7-4A0A0J9YYF1 115 aa6.14□□□□□ -1.43
CPSF7-212ENST00000489728 C9orf118A6NHY6 69 aa6.14□□□□□ -1.43
CPSF7-212ENST00000489728 ANKRD29Q8N6D5 301 aa6.14□□□□□ -1.43
CPSF7-212ENST00000489728 NAA38Q9BRA0 125 aaKnown RBP6.14□□□□□ -1.43
CPSF7-212ENST00000489728 BAALC-AS2P0C853 105 aa6.13□□□□□ -1.43
CPSF7-212ENST00000489728 TAX1BP3O14907 124 aa6.12□□□□□ -1.43
CPSF7-212ENST00000489728 LCE2DQ5TA82 110 aaPredicted RBP6.12□□□□□ -1.43
CPSF7-212ENST00000489728 A0A1W2PNM2 257 aa6.11□□□□□ -1.43
CPSF7-212ENST00000489728 A0A1W2PPM0 123 aa6.11□□□□□ -1.43
CPSF7-212ENST00000489728 RBM3P98179 157 aaKnown RBP6.11□□□□□ -1.43
CPSF7-212ENST00000489728 C21orf62-AS1Q17RA5 79 aa6.11□□□□□ -1.43
CPSF7-212ENST00000489728 XP32Q5T750 250 aa6.11□□□□□ -1.43
CPSF7-212ENST00000489728 A0A087WSZ3 146 aa6.1□□□□□ -1.43
CPSF7-212ENST00000489728 JMJD7-PLA2G4BH0Y9G9 81 aa6.1□□□□□ -1.43
CPSF7-212ENST00000489728 DSCR8Q96T75 97 aa6.1□□□□□ -1.43
CPSF7-212ENST00000489728 CCKP06307 115 aa6.09□□□□□ -1.43
CPSF7-212ENST00000489728 COL5A1-AS1Q5SY13 56 aa6.09□□□□□ -1.43
CPSF7-212ENST00000489728 SEC61BP60468 96 aaKnown RBP6.08□□□□□ -1.44
CPSF7-212ENST00000489728 A0A1B0GV72 72 aa6.07□□□□□ -1.44
CPSF7-212ENST00000489728 A0A1B0GW54 56 aa6.07□□□□□ -1.44
CPSF7-212ENST00000489728 C9JAW5 83 aa6.07□□□□□ -1.44
CPSF7-212ENST00000489728 PDE6GP18545 87 aa6.07□□□□□ -1.44
CPSF7-212ENST00000489728 RNF213Q63HN8 5207 aa6.06□□□□□ -1.44
CPSF7-212ENST00000489728 H3BT86 120 aa6.06□□□□□ -1.44
CPSF7-212ENST00000489728 LOC110117498A0A087WWA1 95 aa6.05□□□□□ -1.44
CPSF7-212ENST00000489728 C9orf92A6NGG3 77 aa6.04□□□□□ -1.44
CPSF7-212ENST00000489728 OBSCN-AS1Q96MR7 158 aa6.04□□□□□ -1.44
CPSF7-212ENST00000489728 Q96NJ1 140 aa6.04□□□□□ -1.44
CPSF7-212ENST00000489728 SPCS1Q9Y6A9 102 aa6.03□□□□□ -1.44
CPSF7-212ENST00000489728 MUC17Q685J3 4493 aa6.03□□□□□ -1.44
CPSF7-212ENST00000489728 A0A0U1RQV1 116 aa6.02□□□□□ -1.45
CPSF7-212ENST00000489728 Q6ZQT0 140 aa6.02□□□□□ -1.45
CPSF7-212ENST00000489728 VPS25Q9BRG1 176 aa6.01□□□□□ -1.45
CPSF7-212ENST00000489728 LINC00472Q9H8W2 130 aa6□□□□□ -1.45
CPSF7-212ENST00000489728 PCP4L1A6NKN8 68 aa5.99□□□□□ -1.45
CPSF7-212ENST00000489728 RPL37P61927 97 aaKnown RBP5.99□□□□□ -1.45
CPSF7-212ENST00000489728 SIGMAR1Q99720 223 aa5.99□□□□□ -1.45
CPSF7-212ENST00000489728 C14orf132Q9NPU4 83 aa5.99□□□□□ -1.45
CPSF7-212ENST00000489728 J3KT08 172 aa5.98□□□□□ -1.45
CPSF7-212ENST00000489728 IGKV4-1P06312 121 aa5.98□□□□□ -1.45
CPSF7-212ENST00000489728 K7EP34 96 aa5.97□□□□□ -1.45
CPSF7-212ENST00000489728 MUC2Q02817 5179 aa5.97□□□□□ -1.45
CPSF7-212ENST00000489728 Q75L30 129 aa5.96□□□□□ -1.46
CPSF7-212ENST00000489728 GTF2H5Q6ZYL4 71 aa5.95□□□□□ -1.46
CPSF7-212ENST00000489728 MTURNQ8N3F0 131 aa5.95□□□□□ -1.46
CPSF7-212ENST00000489728 PCOTHQ58A44 107 aa5.94□□□□□ -1.46
CPSF7-212ENST00000489728 LINC00313P59037 77 aa5.93□□□□□ -1.46
CPSF7-212ENST00000489728 C20orf166-AS1Q96NR2 134 aa5.93□□□□□ -1.46
CPSF7-212ENST00000489728 PRO0461Q9UI25 63 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms