RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 TRIAP1O43715 76 aa10.62□□□□□ -0.71
PTCD3-217ENST00000488801 RETNLBQ9BQ08 111 aa10.62□□□□□ -0.71
PTCD3-217ENST00000488801 PRR4Q16378 134 aa10.61□□□□□ -0.71
PTCD3-217ENST00000488801 PPDPFLQ8WWR9 84 aa10.6□□□□□ -0.71
PTCD3-217ENST00000488801 A0A1B0GX51 115 aa10.58□□□□□ -0.72
PTCD3-217ENST00000488801 CD164Q04900 197 aa10.57□□□□□ -0.72
PTCD3-217ENST00000488801 IGLV8-61A0A075B6I0 122 aa10.56□□□□□ -0.72
PTCD3-217ENST00000488801 FP248Q71RG6 208 aaPredicted RBP10.55□□□□□ -0.72
PTCD3-217ENST00000488801 OCIAD2Q56VL3 154 aa10.54□□□□□ -0.72
PTCD3-217ENST00000488801 TSTD3H0UI37 97 aa10.52□□□□□ -0.73
PTCD3-217ENST00000488801 M0R143 59 aa10.52□□□□□ -0.73
PTCD3-217ENST00000488801 TPRXLQ17RH7 258 aa10.52□□□□□ -0.73
PTCD3-217ENST00000488801 CLEC2BQ92478 149 aa10.52□□□□□ -0.73
PTCD3-217ENST00000488801 IGLV7-46A0A075B6I9 117 aa10.5□□□□□ -0.73
PTCD3-217ENST00000488801 A0A0G2JQZ4 141 aa10.5□□□□□ -0.73
PTCD3-217ENST00000488801 F8WEM9 126 aa10.5□□□□□ -0.73
PTCD3-217ENST00000488801 Q5XG85 94 aa10.5□□□□□ -0.73
PTCD3-217ENST00000488801 SNCGO76070 127 aa10.49□□□□□ -0.73
PTCD3-217ENST00000488801 PSMB2P49721 201 aa10.48□□□□□ -0.73
PTCD3-217ENST00000488801 Q6JHZ5 121 aa10.48□□□□□ -0.73
PTCD3-217ENST00000488801 LIMD2Q9BT23 127 aa10.48□□□□□ -0.73
PTCD3-217ENST00000488801 COX6CP09669 75 aa10.47□□□□□ -0.73
PTCD3-217ENST00000488801 HRCT1Q6UXD1 115 aa10.47□□□□□ -0.73
PTCD3-217ENST00000488801 IGFL1Q6UW32 110 aa10.46□□□□□ -0.73
PTCD3-217ENST00000488801 SNHG12Q9BXW3 62 aa10.44□□□□□ -0.74
PTCD3-217ENST00000488801 KRTAP13-3Q3SY46 172 aa10.43□□□□□ -0.74
PTCD3-217ENST00000488801 LST1O00453 97 aa10.42□□□□□ -0.74
PTCD3-217ENST00000488801 GHRHP01286 108 aa10.42□□□□□ -0.74
PTCD3-217ENST00000488801 NDUFV3P56181 108 aaKnown RBP10.42□□□□□ -0.74
PTCD3-217ENST00000488801 H3BUT2 72 aa10.41□□□□□ -0.74
PTCD3-217ENST00000488801 TRACP01848 142 aa10.41□□□□□ -0.74
PTCD3-217ENST00000488801 RNF213Q63HN8 5207 aa10.4□□□□□ -0.74
PTCD3-217ENST00000488801 ORMDL1Q9P0S3 153 aa10.4□□□□□ -0.74
PTCD3-217ENST00000488801 DNAL4O96015 105 aa10.39□□□□□ -0.75
PTCD3-217ENST00000488801 TRBV7-7A0A0K0K1E9 115 aa10.38□□□□□ -0.75
PTCD3-217ENST00000488801 H3BQ85 93 aa10.38□□□□□ -0.75
PTCD3-217ENST00000488801 MUC17Q685J3 4493 aa10.38□□□□□ -0.75
PTCD3-217ENST00000488801 Q6Q795 121 aa10.37□□□□□ -0.75
PTCD3-217ENST00000488801 SCGB1C2P0DMR2 95 aa10.35□□□□□ -0.75
PTCD3-217ENST00000488801 FABP2P12104 132 aa10.35□□□□□ -0.75
PTCD3-217ENST00000488801 ASB16-AS1Q495Z4 193 aa10.35□□□□□ -0.75
PTCD3-217ENST00000488801 C1orf195Q5TG92 126 aa10.35□□□□□ -0.75
PTCD3-217ENST00000488801 NAA38Q9BRA0 125 aaKnown RBP10.34□□□□□ -0.75
PTCD3-217ENST00000488801 H3BMG7 143 aa10.33□□□□□ -0.76
PTCD3-217ENST00000488801 TMEM256-PLSCR3K7ERE1 68 aa10.33□□□□□ -0.76
PTCD3-217ENST00000488801 CDIP1Q9H305 208 aa10.33□□□□□ -0.76
PTCD3-217ENST00000488801 UBE2V1Q13404 147 aa10.32□□□□□ -0.76
PTCD3-217ENST00000488801 TCL1BO95988 128 aa10.31□□□□□ -0.76
PTCD3-217ENST00000488801 BATFQ16520 125 aa10.3□□□□□ -0.76
PTCD3-217ENST00000488801 TEN1Q86WV5 123 aa10.3□□□□□ -0.76
PTCD3-217ENST00000488801 TAX1BP3O14907 124 aa10.27□□□□□ -0.77
PTCD3-217ENST00000488801 ATXN8Q156A1 80 aa10.27□□□□□ -0.77
PTCD3-217ENST00000488801 A0A1W2PNM2 257 aa10.26□□□□□ -0.77
PTCD3-217ENST00000488801 XP32Q5T750 250 aa10.25□□□□□ -0.77
PTCD3-217ENST00000488801 LYRM7Q5U5X0 104 aa10.25□□□□□ -0.77
PTCD3-217ENST00000488801 C9orf118A6NHY6 69 aa10.24□□□□□ -0.77
PTCD3-217ENST00000488801 TRBV7-4A0A0J9YYF1 115 aa10.23□□□□□ -0.77
PTCD3-217ENST00000488801 BAALC-AS2P0C853 105 aa10.22□□□□□ -0.77
PTCD3-217ENST00000488801 SS18L2Q9UHA2 77 aa10.22□□□□□ -0.77
PTCD3-217ENST00000488801 TRBV20-1A0A075B6N2 111 aa10.21□□□□□ -0.77
PTCD3-217ENST00000488801 ANKRD29Q8N6D5 301 aa10.21□□□□□ -0.77
PTCD3-217ENST00000488801 MUC2Q02817 5179 aa10.21□□□□□ -0.78
PTCD3-217ENST00000488801 A0A087WSZ3 146 aa10.2□□□□□ -0.78
PTCD3-217ENST00000488801 A0A1B0GV72 72 aa10.2□□□□□ -0.78
PTCD3-217ENST00000488801 Q96NJ1 140 aa10.19□□□□□ -0.78
PTCD3-217ENST00000488801 A0A1W2PPM0 123 aa10.18□□□□□ -0.78
PTCD3-217ENST00000488801 C9orf92A6NGG3 77 aa10.16□□□□□ -0.78
PTCD3-217ENST00000488801 RBM3P98179 157 aaKnown RBP10.16□□□□□ -0.78
PTCD3-217ENST00000488801 CCKP06307 115 aa10.14□□□□□ -0.79
PTCD3-217ENST00000488801 C9JAW5 83 aa10.12□□□□□ -0.79
PTCD3-217ENST00000488801 OBSCN-AS1Q96MR7 158 aa10.11□□□□□ -0.79
PTCD3-217ENST00000488801 DSCR8Q96T75 97 aa10.11□□□□□ -0.79
PTCD3-217ENST00000488801 JMJD7-PLA2G4BH0Y9G9 81 aa10.1□□□□□ -0.79
PTCD3-217ENST00000488801 SEC61BP60468 96 aaKnown RBP10.1□□□□□ -0.79
PTCD3-217ENST00000488801 COL5A1-AS1Q5SY13 56 aa10.1□□□□□ -0.79
PTCD3-217ENST00000488801 LOC110117498A0A087WWA1 95 aa10.08□□□□□ -0.8
PTCD3-217ENST00000488801 H3BT86 120 aa10.08□□□□□ -0.8
PTCD3-217ENST00000488801 Q6ZQT0 140 aa10.07□□□□□ -0.8
PTCD3-217ENST00000488801 KRTAP4-1Q9BYQ7 146 aa10.06□□□□□ -0.8
PTCD3-217ENST00000488801 LINC00472Q9H8W2 130 aa10.06□□□□□ -0.8
PTCD3-217ENST00000488801 SPCS1Q9Y6A9 102 aa10.04□□□□□ -0.8
PTCD3-217ENST00000488801 RPL37P61927 97 aaKnown RBP10.03□□□□□ -0.8
PTCD3-217ENST00000488801 PDE6GP18545 87 aa10.02□□□□□ -0.81
PTCD3-217ENST00000488801 MTURNQ8N3F0 131 aa10.02□□□□□ -0.81
PTCD3-217ENST00000488801 VPS25Q9BRG1 176 aa10.02□□□□□ -0.81
PTCD3-217ENST00000488801 C14orf132Q9NPU4 83 aa10.02□□□□□ -0.81
PTCD3-217ENST00000488801 A0A1B0GW54 56 aa10.01□□□□□ -0.81
PTCD3-217ENST00000488801 C21orf62-AS1Q17RA5 79 aa10.01□□□□□ -0.81
PTCD3-217ENST00000488801 PCP4L1A6NKN8 68 aa10□□□□□ -0.81
PTCD3-217ENST00000488801 PCOTHQ58A44 107 aa9.98□□□□□ -0.81
PTCD3-217ENST00000488801 SIGMAR1Q99720 223 aa9.98□□□□□ -0.81
PTCD3-217ENST00000488801 IGKV4-1P06312 121 aa9.97□□□□□ -0.81
PTCD3-217ENST00000488801 SMCPP49901 116 aaPredicted RBP9.97□□□□□ -0.81
PTCD3-217ENST00000488801 K7EP34 96 aa9.96□□□□□ -0.82
PTCD3-217ENST00000488801 PRO0461Q9UI25 63 aa9.96□□□□□ -0.82
PTCD3-217ENST00000488801 FAT4Q6V0I7 4981 aa9.96□□□□□ -0.82
PTCD3-217ENST00000488801 Q75L30 129 aa9.95□□□□□ -0.82
PTCD3-217ENST00000488801 A0A0U1RQV1 116 aa9.93□□□□□ -0.82
PTCD3-217ENST00000488801 DEFB116Q30KQ4 102 aa9.93□□□□□ -0.82
PTCD3-217ENST00000488801 C20orf166-AS1Q96NR2 134 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms