RNA–Protein interactions for RNA: ENST00000485155.1

MDH1-212, Transcript of malate dehydrogenase 1, humanhuman

TSL 1 (best)

Gene MDH1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-212ENST00000485155 H1FX-AS1Q4G0G2 97 aa2.39□□□□□ -2.03
MDH1-212ENST00000485155 MAP1BP46821 2468 aaKnown RBP2.39□□□□□ -2.03
MDH1-212ENST00000485155 A0A096LPF7 62 aa2.38□□□□□ -2.03
MDH1-212ENST00000485155 TPRXLQ17RH7 258 aa2.38□□□□□ -2.03
MDH1-212ENST00000485155 RPL37P61927 97 aaKnown RBP2.36□□□□□ -2.03
MDH1-212ENST00000485155 C10orf99Q6UWK7 81 aa2.36□□□□□ -2.03
MDH1-212ENST00000485155 SPACA4Q8TDM5 124 aa2.36□□□□□ -2.03
MDH1-212ENST00000485155 COL6A3P12111 3177 aa2.36□□□□□ -2.03
MDH1-212ENST00000485155 DNAH12Q6ZR08 3092 aa2.36□□□□□ -2.03
MDH1-212ENST00000485155 APC2O95996 2303 aa2.35□□□□□ -2.03
MDH1-212ENST00000485155 TNRC18O15417 2968 aaPredicted RBP2.34□□□□□ -2.03
MDH1-212ENST00000485155 TPRP12270 2363 aaKnown RBP2.34□□□□□ -2.03
MDH1-212ENST00000485155 ZZEF1O43149 2961 aa2.34□□□□□ -2.03
MDH1-212ENST00000485155 ALMS1Q8TCU4 4167 aa2.34□□□□□ -2.03
MDH1-212ENST00000485155 EP300Q09472 2414 aaPredicted RBP2.33□□□□□ -2.04
MDH1-212ENST00000485155 PCNX1Q96RV3 2341 aa2.33□□□□□ -2.04
MDH1-212ENST00000485155 GPR179Q6PRD1 2367 aa2.33□□□□□ -2.04
MDH1-212ENST00000485155 COL6A6A6NMZ7 2263 aa2.33□□□□□ -2.04
MDH1-212ENST00000485155 PRLHP81277 87 aa2.32□□□□□ -2.04
MDH1-212ENST00000485155 DEFB124Q8NES8 71 aa2.32□□□□□ -2.04
MDH1-212ENST00000485155 ROS1P08922 2347 aa2.32□□□□□ -2.04
MDH1-212ENST00000485155 CNOT1A5YKK6 2376 aaKnown RBP2.32□□□□□ -2.04
MDH1-212ENST00000485155 KRTAP13-1Q8IUC0 172 aa2.31□□□□□ -2.04
MDH1-212ENST00000485155 PLAC4Q8WY50 150 aa2.31□□□□□ -2.04
MDH1-212ENST00000485155 MGAQ8IWI9 3026 aa2.31□□□□□ -2.04
MDH1-212ENST00000485155 RANBP2P49792 3224 aaKnown RBP2.31□□□□□ -2.04
MDH1-212ENST00000485155 ACACAQ13085 2346 aa2.3□□□□□ -2.04
MDH1-212ENST00000485155 TRIOBPQ9H2D6 2365 aa2.3□□□□□ -2.04
MDH1-212ENST00000485155 UTRNP46939 3433 aa2.3□□□□□ -2.04
MDH1-212ENST00000485155 K7EIL1 84 aa2.3□□□□□ -2.04
MDH1-212ENST00000485155 AKAP6Q13023 2319 aa2.29□□□□□ -2.04
MDH1-212ENST00000485155 RP1L1Q8IWN7 2480 aaPredicted RBP2.29□□□□□ -2.04
MDH1-212ENST00000485155 PTPRZ1P23471 2315 aaPredicted RBP2.27□□□□□ -2.05
MDH1-212ENST00000485155 UNC80Q8N2C7 3258 aa2.27□□□□□ -2.05
MDH1-212ENST00000485155 HTN3P15516 51 aa2.26□□□□□ -2.05
MDH1-212ENST00000485155 ANKRD17O75179 2603 aaKnown RBP2.26□□□□□ -2.05
MDH1-212ENST00000485155 NBEAQ8NFP9 2946 aa2.26□□□□□ -2.05
MDH1-212ENST00000485155 ANKHD1Q8IWZ3 2542 aaKnown RBP2.26□□□□□ -2.05
MDH1-212ENST00000485155 SZT2Q5T011 3432 aa2.26□□□□□ -2.05
MDH1-212ENST00000485155 VPS13AQ96RL7 3174 aa2.25□□□□□ -2.05
MDH1-212ENST00000485155 A0A096LNI7 61 aa2.25□□□□□ -2.05
MDH1-212ENST00000485155 INE1O15225 51 aa2.25□□□□□ -2.05
MDH1-212ENST00000485155 C2CD3Q4AC94 2353 aa2.25□□□□□ -2.05
MDH1-212ENST00000485155 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.25□□□□□ -2.052e-14■■■■■ 39
MDH1-212ENST00000485155 CACNA1HO95180 2353 aa2.24□□□□□ -2.05
MDH1-212ENST00000485155 EP400Q96L91 3159 aa2.24□□□□□ -2.05
MDH1-212ENST00000485155 SPINK1P00995 79 aa2.24□□□□□ -2.05
MDH1-212ENST00000485155 DEFB135Q30KP9 77 aa2.24□□□□□ -2.05
MDH1-212ENST00000485155 SPTA1P02549 2419 aa2.24□□□□□ -2.05
MDH1-212ENST00000485155 CREBBPQ92793 2442 aa2.23□□□□□ -2.05
MDH1-212ENST00000485155 DEFB123Q8N688 67 aa2.23□□□□□ -2.05
MDH1-212ENST00000485155 NCOR1O75376 2440 aa2.23□□□□□ -2.05
MDH1-212ENST00000485155 TRANK1O15050 2925 aa2.23□□□□□ -2.05
MDH1-212ENST00000485155 CFAP54Q96N23 3096 aa2.22□□□□□ -2.05
MDH1-212ENST00000485155 PP632Q6XCG6 107 aa2.22□□□□□ -2.05
MDH1-212ENST00000485155 Q6ZRN7 208 aaPredicted RBP2.22□□□□□ -2.05
MDH1-212ENST00000485155 SPINK6Q6UWN8 80 aa2.21□□□□□ -2.06
MDH1-212ENST00000485155 MKI67P46013 3256 aaKnown RBP2.2□□□□□ -2.06
MDH1-212ENST00000485155 PIEZO2Q9H5I5 2752 aa2.2□□□□□ -2.06
MDH1-212ENST00000485155 UBE2DNLQ8IWF7 75 aa2.2□□□□□ -2.06
MDH1-212ENST00000485155 KALRNO60229 2985 aa2.19□□□□□ -2.06
MDH1-212ENST00000485155 S4R3F8 94 aa2.19□□□□□ -2.06
MDH1-212ENST00000485155 ABCA2Q9BZC7 2435 aa2.19□□□□□ -2.06
MDH1-212ENST00000485155 CFAP47Q6ZTR5 3102 aa2.19□□□□□ -2.06
MDH1-212ENST00000485155 CHD7Q9P2D1 2997 aa2.19□□□□□ -2.06
MDH1-212ENST00000485155 FRYQ5TBA9 3013 aa2.18□□□□□ -2.06
MDH1-212ENST00000485155 CHD9Q3L8U1 2897 aa2.18□□□□□ -2.06
MDH1-212ENST00000485155 DEFB4AO15263 64 aa2.18□□□□□ -2.06
MDH1-212ENST00000485155 ZFHX2Q9C0A1 2572 aaPredicted RBP2.18□□□□□ -2.06
MDH1-212ENST00000485155 TENM2Q9NT68 2774 aa2.18□□□□□ -2.06
MDH1-212ENST00000485155 FRYLO94915 3013 aa2.17□□□□□ -2.06
MDH1-212ENST00000485155 NBASA2RRP1 2371 aa2.17□□□□□ -2.06
MDH1-212ENST00000485155 IGF2RP11717 2491 aa2.17□□□□□ -2.06
MDH1-212ENST00000485155 SPTBN4Q9H254 2564 aa2.17□□□□□ -2.06
MDH1-212ENST00000485155 SPRR5A0A1B0GTR4 108 aa2.17□□□□□ -2.06
MDH1-212ENST00000485155 RPS29P62273 56 aaKnown RBP2.17□□□□□ -2.06
MDH1-212ENST00000485155 ZDBF2Q9HCK1 2354 aa2.17□□□□□ -2.06
MDH1-212ENST00000485155 HTTP42858 3142 aa2.16□□□□□ -2.06
MDH1-212ENST00000485155 CSPG4Q6UVK1 2322 aa2.16□□□□□ -2.06
MDH1-212ENST00000485155 TRIOO75962 3097 aa2.16□□□□□ -2.06
MDH1-212ENST00000485155 C10orf95Q9H7T3 257 aa2.16□□□□□ -2.06
MDH1-212ENST00000485155 DNAH14Q0VDD8 3507 aa2.16□□□□□ -2.06
MDH1-212ENST00000485155 MAP1AP78559 2803 aaPredicted RBP2.16□□□□□ -2.06
MDH1-212ENST00000485155 AKAP13Q12802 2813 aa2.16□□□□□ -2.06
MDH1-212ENST00000485155 WDFY4Q6ZS81 3184 aa2.16□□□□□ -2.06
MDH1-212ENST00000485155 PRUNE2Q8WUY3 3088 aa2.15□□□□□ -2.06
MDH1-212ENST00000485155 SPG11Q96JI7 2443 aa2.15□□□□□ -2.07
MDH1-212ENST00000485155 M0QZ58 72 aa2.15□□□□□ -2.07
MDH1-212ENST00000485155 APLNQ9ULZ1 77 aa2.15□□□□□ -2.07
MDH1-212ENST00000485155 SPTAN1Q13813 2472 aaKnown RBP2.15□□□□□ -2.07
MDH1-212ENST00000485155 XIRP2A4UGR9 3374 aa2.14□□□□□ -2.07
MDH1-212ENST00000485155 NCOR2Q9Y618 2525 aa2.14□□□□□ -2.07
MDH1-212ENST00000485155 CHD6Q8TD26 2715 aa2.13□□□□□ -2.07
MDH1-212ENST00000485155 LCE3DQ9BYE3 92 aa2.13□□□□□ -2.07
MDH1-212ENST00000485155 ITPR1Q14643 2758 aa2.12□□□□□ -2.07
MDH1-212ENST00000485155 GVINP1Q7Z2Y8 2422 aa2.12□□□□□ -2.07
MDH1-212ENST00000485155 FLG2Q5D862 2391 aaPredicted RBP2.12□□□□□ -2.07
MDH1-212ENST00000485155 DCHS1Q96JQ0 3298 aa2.11□□□□□ -2.07
MDH1-212ENST00000485155 C5orf42Q9H799 3197 aa2.1□□□□□ -2.07
MDH1-212ENST00000485155 LAMA2P24043 3122 aaKnown RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 178.6 ms