RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 S4R3F8 94 aa6.3□□□□□ -1.4
COL12A1-207ENST00000483888 CENPEQ02224 2701 aa6.3□□□□□ -1.4
COL12A1-207ENST00000483888 FREM2Q5SZK8 3169 aa6.28□□□□□ -1.4
COL12A1-207ENST00000483888 Q6ZR54 194 aa6.28□□□□□ -1.4
COL12A1-207ENST00000483888 REV3LO60673 3130 aa6.27□□□□□ -1.4
COL12A1-207ENST00000483888 A0A087WTM6 91 aa6.24□□□□□ -1.41
COL12A1-207ENST00000483888 RANBP2P49792 3224 aaKnown RBP6.24□□□□□ -1.41
COL12A1-207ENST00000483888 TNP2Q05952 138 aa6.23□□□□□ -1.41
COL12A1-207ENST00000483888 K7EIL1 84 aa6.23□□□□□ -1.41
COL12A1-207ENST00000483888 SPRR1AP35321 89 aa6.22□□□□□ -1.41
COL12A1-207ENST00000483888 KRTAP26-1Q6PEX3 210 aa6.22□□□□□ -1.41
COL12A1-207ENST00000483888 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.22□□□□□ -1.41
COL12A1-207ENST00000483888 CHD6Q8TD26 2715 aa6.19□□□□□ -1.42
COL12A1-207ENST00000483888 KRTAP29-1A8MX34 341 aaPredicted RBP6.18□□□□□ -1.42
COL12A1-207ENST00000483888 NBEAL1Q6ZS30 2694 aa6.18□□□□□ -1.42
COL12A1-207ENST00000483888 R4GN34 69 aa6.18□□□□□ -1.42
COL12A1-207ENST00000483888 PLAC4Q8WY50 150 aa6.17□□□□□ -1.42
COL12A1-207ENST00000483888 A8MUU9 505 aa6.17□□□□□ -1.42
COL12A1-207ENST00000483888 KRTAP10-11P60412 298 aa6.16□□□□□ -1.42
COL12A1-207ENST00000483888 LCE6AA0A183 80 aa6.16□□□□□ -1.42
COL12A1-207ENST00000483888 DSPP15924 2871 aaKnown RBP6.16□□□□□ -1.42
COL12A1-207ENST00000483888 A0A087X002 238 aa6.15□□□□□ -1.42
COL12A1-207ENST00000483888 PANO1I0J062 215 aa6.15□□□□□ -1.43
COL12A1-207ENST00000483888 J3QL48 77 aa6.14□□□□□ -1.43
COL12A1-207ENST00000483888 SMR3BP02814 79 aaPredicted RBP6.12□□□□□ -1.43
COL12A1-207ENST00000483888 C20orf166-AS1Q96NR2 134 aa6.12□□□□□ -1.43
COL12A1-207ENST00000483888 SPRR1BP22528 89 aa6.12□□□□□ -1.43
COL12A1-207ENST00000483888 Q6ZSA8 131 aa6.12□□□□□ -1.43
COL12A1-207ENST00000483888 GCN1Q92616 2671 aaKnown RBP6.1□□□□□ -1.43
COL12A1-207ENST00000483888 VPS13AQ96RL7 3174 aa6.1□□□□□ -1.43
COL12A1-207ENST00000483888 MGAQ8IWI9 3026 aa6.08□□□□□ -1.44
COL12A1-207ENST00000483888 M0QZ58 72 aa6.08□□□□□ -1.44
COL12A1-207ENST00000483888 HECTD1Q9ULT8 2610 aa6.06□□□□□ -1.44
COL12A1-207ENST00000483888 CELSR3Q9NYQ7 3312 aa6.06□□□□□ -1.44
COL12A1-207ENST00000483888 TRIOO75962 3097 aa6.06□□□□□ -1.44
COL12A1-207ENST00000483888 KRTAP10-3P60369 221 aa6.05□□□□□ -1.44
COL12A1-207ENST00000483888 XIRP2A4UGR9 3374 aa6.05□□□□□ -1.44
COL12A1-207ENST00000483888 UNC79Q9P2D8 2635 aa6.04□□□□□ -1.44
COL12A1-207ENST00000483888 ITPR1Q14643 2758 aa6.04□□□□□ -1.44
COL12A1-207ENST00000483888 KRTAP24-1Q3LI83 254 aa6.04□□□□□ -1.44
COL12A1-207ENST00000483888 KRTAP11-1Q8IUC1 163 aa6.03□□□□□ -1.44
COL12A1-207ENST00000483888 DNAH14Q0VDD8 3507 aa6.03□□□□□ -1.44
COL12A1-207ENST00000483888 MGAM2Q2M2H8 2515 aa6.02□□□□□ -1.45
COL12A1-207ENST00000483888 HELZ2Q9BYK8 2649 aaKnown RBP6.01□□□□□ -1.45
COL12A1-207ENST00000483888 MKI67P46013 3256 aaKnown RBP6.01□□□□□ -1.45
COL12A1-207ENST00000483888 FLNAP21333 2647 aaKnown RBP6.01□□□□□ -1.45
COL12A1-207ENST00000483888 WWC2-AS2Q96NR7 200 aa6□□□□□ -1.45
COL12A1-207ENST00000483888 FRYQ5TBA9 3013 aa6□□□□□ -1.45
COL12A1-207ENST00000483888 KRTAP4-16G5E9R7 235 aaPredicted RBP6□□□□□ -1.45
COL12A1-207ENST00000483888 APCP25054 2843 aa6□□□□□ -1.45
COL12A1-207ENST00000483888 KALRNO60229 2985 aa5.99□□□□□ -1.45
COL12A1-207ENST00000483888 CFAP46Q8IYW2 2715 aa5.98□□□□□ -1.45
COL12A1-207ENST00000483888 NOTCH2NLQ7Z3S9 236 aa5.98□□□□□ -1.45
COL12A1-207ENST00000483888 TRANK1O15050 2925 aa5.97□□□□□ -1.45
COL12A1-207ENST00000483888 NOTCH1P46531 2555 aa5.97□□□□□ -1.45
COL12A1-207ENST00000483888 PLAC8Q9NZF1 115 aa5.96□□□□□ -1.45
COL12A1-207ENST00000483888 ATRQ13535 2644 aa5.96□□□□□ -1.45
COL12A1-207ENST00000483888 C10orf95Q9H7T3 257 aa5.95□□□□□ -1.46
COL12A1-207ENST00000483888 LRBAP50851 2863 aa5.95□□□□□ -1.46
COL12A1-207ENST00000483888 NBEAL2Q6ZNJ1 2754 aa5.93□□□□□ -1.46
COL12A1-207ENST00000483888 ITPR3Q14573 2671 aa5.93□□□□□ -1.46
COL12A1-207ENST00000483888 UNC80Q8N2C7 3258 aa5.91□□□□□ -1.46
COL12A1-207ENST00000483888 STAB2Q8WWQ8 2551 aa5.9□□□□□ -1.46
COL12A1-207ENST00000483888 COL6A5A8TX70 2615 aa5.9□□□□□ -1.47
COL12A1-207ENST00000483888 M0R2T5 61 aa5.89□□□□□ -1.47
COL12A1-207ENST00000483888 STAB1Q9NY15 2570 aa5.87□□□□□ -1.47
COL12A1-207ENST00000483888 MAP1AP78559 2803 aaPredicted RBP5.86□□□□□ -1.47
COL12A1-207ENST00000483888 NBEAQ8NFP9 2946 aa5.86□□□□□ -1.47
COL12A1-207ENST00000483888 PRUNE2Q8WUY3 3088 aa5.85□□□□□ -1.47
COL12A1-207ENST00000483888 UBR5O95071 2799 aaPredicted RBP5.84□□□□□ -1.47
COL12A1-207ENST00000483888 NSD1Q96L73 2696 aaPredicted RBP5.82□□□□□ -1.48
COL12A1-207ENST00000483888 CHD7Q9P2D1 2997 aa5.81□□□□□ -1.48
COL12A1-207ENST00000483888 UTP20O75691 2785 aaKnown RBP5.81□□□□□ -1.48
COL12A1-207ENST00000483888 TEX15Q9BXT5 2789 aa5.81□□□□□ -1.48
COL12A1-207ENST00000483888 BAHCC1Q9P281 2608 aa5.79□□□□□ -1.48
COL12A1-207ENST00000483888 H0YAA0 97 aa5.79□□□□□ -1.48
COL12A1-207ENST00000483888 MAST4O15021 2626 aa5.79□□□□□ -1.48
COL12A1-207ENST00000483888 ASH1LQ9NR48 2969 aaKnown RBP5.79□□□□□ -1.48
COL12A1-207ENST00000483888 P0C880 135 aa5.78□□□□□ -1.48
COL12A1-207ENST00000483888 CDH23Q9H251 3354 aa5.77□□□□□ -1.49
COL12A1-207ENST00000483888 KRTAP1-5Q9BYS1 174 aa5.76□□□□□ -1.49
COL12A1-207ENST00000483888 COL12A1Q99715 3063 aa5.74□□□□□ -1.49
COL12A1-207ENST00000483888 TACC2O95359 2948 aa5.73□□□□□ -1.49
COL12A1-207ENST00000483888 WDFY4Q6ZS81 3184 aa5.72□□□□□ -1.49
COL12A1-207ENST00000483888 LAMA3Q16787 3333 aa5.72□□□□□ -1.49
COL12A1-207ENST00000483888 FRYLO94915 3013 aa5.72□□□□□ -1.49
COL12A1-207ENST00000483888 TNP1P09430 55 aa5.71□□□□□ -1.5
COL12A1-207ENST00000483888 PP632Q6XCG6 107 aa5.71□□□□□ -1.5
COL12A1-207ENST00000483888 KRTAP1-3Q8IUG1 177 aa5.71□□□□□ -1.5
COL12A1-207ENST00000483888 LAMA1P25391 3075 aa5.7□□□□□ -1.5
COL12A1-207ENST00000483888 BRCA2P51587 3418 aa5.69□□□□□ -1.5
COL12A1-207ENST00000483888 DMXL1Q9Y485 3027 aa5.68□□□□□ -1.5
COL12A1-207ENST00000483888 KMT2BQ9UMN6 2715 aaPredicted RBP5.68□□□□□ -1.5
COL12A1-207ENST00000483888 ZZEF1O43149 2961 aa5.66□□□□□ -1.5
COL12A1-207ENST00000483888 COL6A3P12111 3177 aa5.66□□□□□ -1.5
COL12A1-207ENST00000483888 KRTAP1-1Q07627 177 aa5.65□□□□□ -1.5
COL12A1-207ENST00000483888 KRTAP7-1Q8IUC3 87 aa5.64□□□□□ -1.51
COL12A1-207ENST00000483888 VCANP13611 3396 aa5.64□□□□□ -1.51
COL12A1-207ENST00000483888 CHD9Q3L8U1 2897 aa5.64□□□□□ -1.51
COL12A1-207ENST00000483888 KRTAP10-8P60410 259 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 227.8 ms