RNA–Protein interactions for RNA: ENST00000482785.1

SHQ1-208, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 3

Gene SHQ1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-208ENST00000482785 PCOTHQ58A44 107 aa1.78□□□□□ -2.12
SHQ1-208ENST00000482785 CFAP126Q5VTH2 177 aa1.78□□□□□ -2.12
SHQ1-208ENST00000482785 BAGE2Q86Y30 109 aa1.78□□□□□ -2.12
SHQ1-208ENST00000482785 TIMM21Q9BVV7 248 aa1.78□□□□□ -2.12
SHQ1-208ENST00000482785 MED9Q9NWA0 146 aa1.78□□□□□ -2.12
SHQ1-208ENST00000482785 A0A087WWC5 75 aa1.77□□□□□ -2.13
SHQ1-208ENST00000482785 TRBV27A0A0K0K1C4 114 aa1.77□□□□□ -2.13
SHQ1-208ENST00000482785 H3BMG7 143 aa1.77□□□□□ -2.13
SHQ1-208ENST00000482785 RNASE3P12724 160 aaKnown RBP1.77□□□□□ -2.13
SHQ1-208ENST00000482785 GNG4P50150 75 aa1.77□□□□□ -2.13
SHQ1-208ENST00000482785 CRIP1P50238 77 aa1.77□□□□□ -2.13
SHQ1-208ENST00000482785 LINC01556Q5JQF7 62 aa1.77□□□□□ -2.13
SHQ1-208ENST00000482785 Q5XG85 94 aa1.77□□□□□ -2.13
SHQ1-208ENST00000482785 C7orf65Q6ZTY9 151 aa1.77□□□□□ -2.13
SHQ1-208ENST00000482785 CST9LQ9H4G1 147 aa1.77□□□□□ -2.13
SHQ1-208ENST00000482785 TMEM218A2RU14 115 aa1.76□□□□□ -2.13
SHQ1-208ENST00000482785 ZNF727A8MUV8 499 aa1.76□□□□□ -2.13
SHQ1-208ENST00000482785 IGHV3-30P01768 117 aa1.76□□□□□ -2.13
SHQ1-208ENST00000482785 IGHV3-33P01772 117 aa1.76□□□□□ -2.13
SHQ1-208ENST00000482785 MT-ND6P03923 174 aa1.76□□□□□ -2.13
SHQ1-208ENST00000482785 SFTA3P0C7M3 94 aa1.76□□□□□ -2.13
SHQ1-208ENST00000482785 LINC00694P0DN24 101 aa1.76□□□□□ -2.13
SHQ1-208ENST00000482785 IGHV3-30-5P0DP03 117 aa1.76□□□□□ -2.13
SHQ1-208ENST00000482785 ELOBQ15370 118 aa1.76□□□□□ -2.13
SHQ1-208ENST00000482785 RHOHQ15669 191 aa1.76□□□□□ -2.13
SHQ1-208ENST00000482785 Q86TA4 180 aa1.76□□□□□ -2.13
SHQ1-208ENST00000482785 ATP6V0E2Q8NHE4 81 aa1.76□□□□□ -2.13
SHQ1-208ENST00000482785 DIRC1Q969H9 104 aa1.76□□□□□ -2.13
SHQ1-208ENST00000482785 CHCHD1Q96BP2 118 aaKnown RBP1.76□□□□□ -2.13
SHQ1-208ENST00000482785 PRELID3AQ96N28 172 aa1.76□□□□□ -2.13
SHQ1-208ENST00000482785 SMIM7Q9BQ49 75 aa1.76□□□□□ -2.13
SHQ1-208ENST00000482785 KRTAP4-4Q9BYR3 166 aa1.76□□□□□ -2.13
SHQ1-208ENST00000482785 TRBV10-1A0A0K0K1A3 114 aa1.75□□□□□ -2.13
SHQ1-208ENST00000482785 F2Z2F3 143 aa1.75□□□□□ -2.13
SHQ1-208ENST00000482785 F8W036 122 aa1.75□□□□□ -2.13
SHQ1-208ENST00000482785 ARMS2P0C7Q2 107 aa1.75□□□□□ -2.13
SHQ1-208ENST00000482785 FOXA3P55318 350 aaPredicted RBP1.75□□□□□ -2.13
SHQ1-208ENST00000482785 ROMO1P60602 79 aa1.75□□□□□ -2.13
SHQ1-208ENST00000482785 MRPS36P82909 103 aaKnown RBP1.75□□□□□ -2.13
SHQ1-208ENST00000482785 BRK1Q8WUW1 75 aa1.75□□□□□ -2.13
SHQ1-208ENST00000482785 SEC11CQ9BY50 192 aa1.75□□□□□ -2.13
SHQ1-208ENST00000482785 TRBV7-3A0A075B6L6 115 aa1.74□□□□□ -2.13
SHQ1-208ENST00000482785 MT-ND4LP03901 98 aa1.74□□□□□ -2.13
SHQ1-208ENST00000482785 UBE2D3P61077 147 aa1.74□□□□□ -2.13
SHQ1-208ENST00000482785 UBE2D2P62837 147 aa1.74□□□□□ -2.13
SHQ1-208ENST00000482785 ADIRFQ15847 76 aa1.74□□□□□ -2.13
SHQ1-208ENST00000482785 SPANXN1Q5VSR9 72 aa1.74□□□□□ -2.13
SHQ1-208ENST00000482785 TSKUQ8WUA8 353 aa1.74□□□□□ -2.13
SHQ1-208ENST00000482785 AP1S3Q96PC3 154 aa1.74□□□□□ -2.13
SHQ1-208ENST00000482785 TRBV6-8A0A0A6YYG3 113 aa1.73□□□□□ -2.13
SHQ1-208ENST00000482785 A0A1B0GUT8 65 aa1.73□□□□□ -2.13
SHQ1-208ENST00000482785 SMIM27A0A1W2PRY6 76 aa1.73□□□□□ -2.13
SHQ1-208ENST00000482785 H3BVH4 76 aa1.73□□□□□ -2.13
SHQ1-208ENST00000482785 S100A8P05109 93 aa1.73□□□□□ -2.13
SHQ1-208ENST00000482785 IGKV4-1P06312 121 aa1.73□□□□□ -2.13
SHQ1-208ENST00000482785 IGLC6P0CF74 106 aa1.73□□□□□ -2.13
SHQ1-208ENST00000482785 FABP4P15090 132 aa1.73□□□□□ -2.13
SHQ1-208ENST00000482785 PKIAP61925 76 aa1.73□□□□□ -2.13
SHQ1-208ENST00000482785 Q0VG73 95 aa1.73□□□□□ -2.13
SHQ1-208ENST00000482785 Q1T7F1 81 aa1.73□□□□□ -2.13
SHQ1-208ENST00000482785 SVBPQ8N300 66 aa1.73□□□□□ -2.13
SHQ1-208ENST00000482785 OR10AG1Q8NH19 301 aa1.73□□□□□ -2.13
SHQ1-208ENST00000482785 CNFNQ9BYD5 112 aa1.73□□□□□ -2.13
SHQ1-208ENST00000482785 TMEM242Q9NWH2 141 aa1.73□□□□□ -2.13
SHQ1-208ENST00000482785 V9GYV3 84 aa1.73□□□□□ -2.13
SHQ1-208ENST00000482785 TRAV12-1A0A0B4J245 112 aa1.72□□□□□ -2.13
SHQ1-208ENST00000482785 C7orf77A4D0Y5 90 aa1.72□□□□□ -2.13
SHQ1-208ENST00000482785 HIGD1CA8MV81 97 aa1.72□□□□□ -2.13
SHQ1-208ENST00000482785 M0QY20 66 aa1.72□□□□□ -2.13
SHQ1-208ENST00000482785 UQCRQO14949 82 aa1.72□□□□□ -2.13
SHQ1-208ENST00000482785 PPP1R17O96001 155 aa1.72□□□□□ -2.13
SHQ1-208ENST00000482785 APOC3P02656 99 aa1.72□□□□□ -2.13
SHQ1-208ENST00000482785 ADCYAP1P18509 176 aa1.72□□□□□ -2.13
SHQ1-208ENST00000482785 S100PP25815 95 aa1.72□□□□□ -2.13
SHQ1-208ENST00000482785 IQCJQ1A5X6 159 aa1.72□□□□□ -2.13
SHQ1-208ENST00000482785 FAM74A4Q5TZK3 123 aa1.72□□□□□ -2.13
SHQ1-208ENST00000482785 ENHOQ6UWT2 76 aa1.72□□□□□ -2.13
SHQ1-208ENST00000482785 TMEM254Q8TBM7 123 aa1.72□□□□□ -2.13
SHQ1-208ENST00000482785 TMEM191AQ9H0A3 160 aa1.72□□□□□ -2.13
SHQ1-208ENST00000482785 IGKV2D-26A0A0A0MRZ7 120 aa1.71□□□□□ -2.14
SHQ1-208ENST00000482785 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.71□□□□□ -2.14
SHQ1-208ENST00000482785 IGHV1-24A0A0C4DH33 117 aa1.71□□□□□ -2.14
SHQ1-208ENST00000482785 hDV103S1A0JD37 113 aa1.71□□□□□ -2.14
SHQ1-208ENST00000482785 TMEM262E9PQX1 116 aa1.71□□□□□ -2.14
SHQ1-208ENST00000482785 CRPP02741 224 aa1.71□□□□□ -2.14
SHQ1-208ENST00000482785 S100A1P23297 94 aa1.71□□□□□ -2.14
SHQ1-208ENST00000482785 ZNF56Q15929 161 aa1.71□□□□□ -2.14
SHQ1-208ENST00000482785 KRTAP26-1Q6PEX3 210 aa1.71□□□□□ -2.14
SHQ1-208ENST00000482785 VPS25Q9BRG1 176 aa1.71□□□□□ -2.14
SHQ1-208ENST00000482785 NIT2Q9NQR4 276 aa1.71□□□□□ -2.14
SHQ1-208ENST00000482785 SMCO4Q9NRQ5 59 aa1.71□□□□□ -2.14
SHQ1-208ENST00000482785 TRBV25-1A0A075B6N4 114 aa1.7□□□□□ -2.14
SHQ1-208ENST00000482785 A0A087WSZ3 146 aa1.7□□□□□ -2.14
SHQ1-208ENST00000482785 TRBV6-5A0A0K0K1A5 114 aa1.7□□□□□ -2.14
SHQ1-208ENST00000482785 J3QR89 54 aa1.7□□□□□ -2.14
SHQ1-208ENST00000482785 NCR2O95944 276 aa1.7□□□□□ -2.14
SHQ1-208ENST00000482785 ANGP03950 147 aaKnown RBP1.7□□□□□ -2.14
SHQ1-208ENST00000482785 MGPP08493 103 aa1.7□□□□□ -2.14
SHQ1-208ENST00000482785 CKS2P33552 79 aa1.7□□□□□ -2.14
SHQ1-208ENST00000482785 LINC00269Q8N2A0 174 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms