RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 K7ERJ3 54 aa11.93□□□□□ -0.5
SEC13-217ENST00000482647 LOC105371267A0A1B0GV96 52 aa11.92□□□□□ -0.5
SEC13-217ENST00000482647 F8WEM9 126 aa11.91□□□□□ -0.5
SEC13-217ENST00000482647 TRIAP1O43715 76 aa11.9□□□□□ -0.5
SEC13-217ENST00000482647 PPDPFLQ8WWR9 84 aa11.9□□□□□ -0.5
SEC13-217ENST00000482647 IGLV7-46A0A075B6I9 117 aa11.89□□□□□ -0.51
SEC13-217ENST00000482647 PSMB2P49721 201 aa11.89□□□□□ -0.51
SEC13-217ENST00000482647 FAM218AQ96MZ4 157 aa11.89□□□□□ -0.51
SEC13-217ENST00000482647 CD164Q04900 197 aa11.88□□□□□ -0.51
SEC13-217ENST00000482647 OCIAD2Q56VL3 154 aa11.88□□□□□ -0.51
SEC13-217ENST00000482647 HRCT1Q6UXD1 115 aa11.88□□□□□ -0.51
SEC13-217ENST00000482647 FP248Q71RG6 208 aaPredicted RBP11.88□□□□□ -0.51
SEC13-217ENST00000482647 A0A1B0GX51 115 aa11.87□□□□□ -0.51
SEC13-217ENST00000482647 COX6CP09669 75 aa11.86□□□□□ -0.51
SEC13-217ENST00000482647 SNHG12Q9BXW3 62 aa11.86□□□□□ -0.51
SEC13-217ENST00000482647 TSTD3H0UI37 97 aa11.84□□□□□ -0.51
SEC13-217ENST00000482647 M0R143 59 aa11.84□□□□□ -0.51
SEC13-217ENST00000482647 LIMD2Q9BT23 127 aa11.84□□□□□ -0.51
SEC13-217ENST00000482647 GHRHP01286 108 aa11.83□□□□□ -0.52
SEC13-217ENST00000482647 Q6JHZ5 121 aa11.81□□□□□ -0.52
SEC13-217ENST00000482647 IGLV8-61A0A075B6I0 122 aa11.8□□□□□ -0.52
SEC13-217ENST00000482647 A0A0G2JQZ4 141 aa11.8□□□□□ -0.52
SEC13-217ENST00000482647 TPRXLQ17RH7 258 aa11.8□□□□□ -0.52
SEC13-217ENST00000482647 CLEC2BQ92478 149 aa11.8□□□□□ -0.52
SEC13-217ENST00000482647 RNF213Q63HN8 5207 aa11.8□□□□□ -0.52
SEC13-217ENST00000482647 DNAL4O96015 105 aa11.77□□□□□ -0.53
SEC13-217ENST00000482647 SCGB1C2P0DMR2 95 aa11.77□□□□□ -0.53
SEC13-217ENST00000482647 CDIP1Q9H305 208 aa11.75□□□□□ -0.53
SEC13-217ENST00000482647 FABP2P12104 132 aa11.74□□□□□ -0.53
SEC13-217ENST00000482647 NDUFV3P56181 108 aaKnown RBP11.74□□□□□ -0.53
SEC13-217ENST00000482647 Q5XG85 94 aa11.74□□□□□ -0.53
SEC13-217ENST00000482647 IGFL1Q6UW32 110 aa11.74□□□□□ -0.53
SEC13-217ENST00000482647 H3BQ85 93 aa11.73□□□□□ -0.53
SEC13-217ENST00000482647 H3BUT2 72 aa11.72□□□□□ -0.53
SEC13-217ENST00000482647 ORMDL1Q9P0S3 153 aa11.72□□□□□ -0.53
SEC13-217ENST00000482647 TCL1BO95988 128 aa11.7□□□□□ -0.54
SEC13-217ENST00000482647 TRACP01848 142 aa11.69□□□□□ -0.54
SEC13-217ENST00000482647 KRTAP13-3Q3SY46 172 aa11.69□□□□□ -0.54
SEC13-217ENST00000482647 H3BMG7 143 aa11.68□□□□□ -0.54
SEC13-217ENST00000482647 TMEM256-PLSCR3K7ERE1 68 aa11.67□□□□□ -0.54
SEC13-217ENST00000482647 LST1O00453 97 aa11.67□□□□□ -0.54
SEC13-217ENST00000482647 TRBV7-7A0A0K0K1E9 115 aa11.66□□□□□ -0.54
SEC13-217ENST00000482647 BATFQ16520 125 aa11.65□□□□□ -0.54
SEC13-217ENST00000482647 C1orf195Q5TG92 126 aa11.63□□□□□ -0.55
SEC13-217ENST00000482647 NAA38Q9BRA0 125 aaKnown RBP11.61□□□□□ -0.55
SEC13-217ENST00000482647 Q6Q795 121 aa11.6□□□□□ -0.55
SEC13-217ENST00000482647 TEN1Q86WV5 123 aa11.6□□□□□ -0.55
SEC13-217ENST00000482647 UBE2V1Q13404 147 aa11.59□□□□□ -0.55
SEC13-217ENST00000482647 ASB16-AS1Q495Z4 193 aa11.59□□□□□ -0.55
SEC13-217ENST00000482647 ATXN8Q156A1 80 aa11.58□□□□□ -0.56
SEC13-217ENST00000482647 ANKRD29Q8N6D5 301 aa11.57□□□□□ -0.56
SEC13-217ENST00000482647 LYRM7Q5U5X0 104 aa11.55□□□□□ -0.56
SEC13-217ENST00000482647 A0A1B0GV72 72 aa11.54□□□□□ -0.56
SEC13-217ENST00000482647 BAALC-AS2P0C853 105 aa11.54□□□□□ -0.56
SEC13-217ENST00000482647 SS18L2Q9UHA2 77 aa11.54□□□□□ -0.56
SEC13-217ENST00000482647 MUC2Q02817 5179 aa11.54□□□□□ -0.56
SEC13-217ENST00000482647 MUC17Q685J3 4493 aa11.5□□□□□ -0.57
SEC13-217ENST00000482647 TRBV20-1A0A075B6N2 111 aa11.5□□□□□ -0.57
SEC13-217ENST00000482647 A0A1W2PNM2 257 aa11.5□□□□□ -0.57
SEC13-217ENST00000482647 A0A087WSZ3 146 aa11.49□□□□□ -0.57
SEC13-217ENST00000482647 C9orf92A6NGG3 77 aa11.49□□□□□ -0.57
SEC13-217ENST00000482647 C9orf118A6NHY6 69 aa11.49□□□□□ -0.57
SEC13-217ENST00000482647 XP32Q5T750 250 aa11.49□□□□□ -0.57
SEC13-217ENST00000482647 RBM3P98179 157 aaKnown RBP11.48□□□□□ -0.57
SEC13-217ENST00000482647 TRBV7-4A0A0J9YYF1 115 aa11.47□□□□□ -0.57
SEC13-217ENST00000482647 TAX1BP3O14907 124 aa11.47□□□□□ -0.57
SEC13-217ENST00000482647 CCKP06307 115 aa11.45□□□□□ -0.58
SEC13-217ENST00000482647 SEC61BP60468 96 aaKnown RBP11.45□□□□□ -0.58
SEC13-217ENST00000482647 DSCR8Q96T75 97 aa11.45□□□□□ -0.58
SEC13-217ENST00000482647 A0A1W2PPM0 123 aa11.42□□□□□ -0.58
SEC13-217ENST00000482647 C9JAW5 83 aa11.4□□□□□ -0.58
SEC13-217ENST00000482647 JMJD7-PLA2G4BH0Y9G9 81 aa11.39□□□□□ -0.59
SEC13-217ENST00000482647 VPS25Q9BRG1 176 aa11.38□□□□□ -0.59
SEC13-217ENST00000482647 COL5A1-AS1Q5SY13 56 aa11.37□□□□□ -0.59
SEC13-217ENST00000482647 Q96NJ1 140 aa11.34□□□□□ -0.59
SEC13-217ENST00000482647 A0A0U1RQV1 116 aa11.31□□□□□ -0.6
SEC13-217ENST00000482647 PDE6GP18545 87 aa11.31□□□□□ -0.6
SEC13-217ENST00000482647 C21orf62-AS1Q17RA5 79 aa11.31□□□□□ -0.6
SEC13-217ENST00000482647 LOC110117498A0A087WWA1 95 aa11.3□□□□□ -0.6
SEC13-217ENST00000482647 OBSCN-AS1Q96MR7 158 aa11.3□□□□□ -0.6
SEC13-217ENST00000482647 PCP4L1A6NKN8 68 aa11.29□□□□□ -0.6
SEC13-217ENST00000482647 H3BT86 120 aa11.29□□□□□ -0.6
SEC13-217ENST00000482647 SPCS1Q9Y6A9 102 aa11.29□□□□□ -0.6
SEC13-217ENST00000482647 Q6ZQT0 140 aa11.28□□□□□ -0.6
SEC13-217ENST00000482647 IGKV4-1P06312 121 aa11.27□□□□□ -0.61
SEC13-217ENST00000482647 PCOTHQ58A44 107 aa11.27□□□□□ -0.61
SEC13-217ENST00000482647 SIGMAR1Q99720 223 aa11.27□□□□□ -0.61
SEC13-217ENST00000482647 LINC00472Q9H8W2 130 aa11.27□□□□□ -0.61
SEC13-217ENST00000482647 RPL37P61927 97 aaKnown RBP11.26□□□□□ -0.61
SEC13-217ENST00000482647 C14orf132Q9NPU4 83 aa11.26□□□□□ -0.61
SEC13-217ENST00000482647 FAT4Q6V0I7 4981 aa11.25□□□□□ -0.61
SEC13-217ENST00000482647 A0A1B0GW54 56 aa11.25□□□□□ -0.61
SEC13-217ENST00000482647 MTURNQ8N3F0 131 aa11.24□□□□□ -0.61
SEC13-217ENST00000482647 DEFB116Q30KQ4 102 aa11.23□□□□□ -0.61
SEC13-217ENST00000482647 KRTAP4-1Q9BYQ7 146 aa11.21□□□□□ -0.61
SEC13-217ENST00000482647 Q75L30 129 aa11.18□□□□□ -0.62
SEC13-217ENST00000482647 DSCR10P59022 87 aa11.17□□□□□ -0.62
SEC13-217ENST00000482647 J3KT08 172 aa11.16□□□□□ -0.62
SEC13-217ENST00000482647 K7EP34 96 aa11.16□□□□□ -0.62
SEC13-217ENST00000482647 LINC00313P59037 77 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms