RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 FBN3Q75N90 2809 aa1.64□□□□□ -2.15
RBM39-233ENST00000482563 MINOS1Q5TGZ0 78 aa1.63□□□□□ -2.15
RBM39-233ENST00000482563 SPINK6Q6UWN8 80 aa1.63□□□□□ -2.15
RBM39-233ENST00000482563 WNK2Q9Y3S1 2297 aa1.63□□□□□ -2.15
RBM39-233ENST00000482563 ZNF469Q96JG9 3925 aaPredicted RBP1.63□□□□□ -2.15
RBM39-233ENST00000482563 CDC42BPAQ5VT25 1732 aa1.61□□□□□ -2.15
RBM39-233ENST00000482563 OTOGQ6ZRI0 2925 aa1.59□□□□□ -2.15
RBM39-233ENST00000482563 H0YGX0 51 aa1.59□□□□□ -2.16
RBM39-233ENST00000482563 ABCA2Q9BZC7 2435 aa1.59□□□□□ -2.16
RBM39-233ENST00000482563 PDE4DIPQ5VU43 2346 aa1.57□□□□□ -2.16
RBM39-233ENST00000482563 SMIM27A0A1W2PRY6 76 aa1.57□□□□□ -2.16
RBM39-233ENST00000482563 RPS27P42677 84 aaKnown RBP1.57□□□□□ -2.16
RBM39-233ENST00000482563 RPS27LQ71UM5 84 aaKnown RBP1.57□□□□□ -2.16
RBM39-233ENST00000482563 LINC00308Q8TCZ7 52 aa1.57□□□□□ -2.16
RBM39-233ENST00000482563 C6orf48Q9UBA6 75 aa1.57□□□□□ -2.16
RBM39-233ENST00000482563 SPTA1P02549 2419 aa1.57□□□□□ -2.16
RBM39-233ENST00000482563 TOP2AP11388 1531 aaKnown RBP1.56□□□□□ -2.16
RBM39-233ENST00000482563 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
RBM39-233ENST00000482563 TOMM5Q8N4H5 51 aa1.54□□□□□ -2.16
RBM39-233ENST00000482563 ABRACLQ9P1F3 81 aa1.54□□□□□ -2.16
RBM39-233ENST00000482563 IQGAP2Q13576 1575 aa1.54□□□□□ -2.16
RBM39-233ENST00000482563 NCOR1O75376 2440 aa1.53□□□□□ -2.16
RBM39-233ENST00000482563 IQGAP1P46940 1657 aa1.53□□□□□ -2.16
RBM39-233ENST00000482563 LINC01546A6NGU7 62 aa1.53□□□□□ -2.16
RBM39-233ENST00000482563 IGF2RP11717 2491 aa1.52□□□□□ -2.17
RBM39-233ENST00000482563 NOTCH1P46531 2555 aa1.52□□□□□ -2.17
RBM39-233ENST00000482563 AKAP13Q12802 2813 aa1.52□□□□□ -2.17
RBM39-233ENST00000482563 TMEM167BQ9NRX6 74 aa1.52□□□□□ -2.17
RBM39-233ENST00000482563 BSNQ9UPA5 3926 aa1.5□□□□□ -2.17
RBM39-233ENST00000482563 CSPG4Q6UVK1 2322 aa1.5□□□□□ -2.17
RBM39-233ENST00000482563 ZFYVE26Q68DK2 2539 aa1.49□□□□□ -2.17
RBM39-233ENST00000482563 LMO7Q8WWI1 1683 aa1.48□□□□□ -2.17
RBM39-233ENST00000482563 TIMM8BQ9Y5J9 83 aaPredicted RBP1.47□□□□□ -2.17
RBM39-233ENST00000482563 PRRC2CQ9Y520 2896 aaKnown RBP1.46□□□□□ -2.18
RBM39-233ENST00000482563 UNC79Q9P2D8 2635 aa1.46□□□□□ -2.18
RBM39-233ENST00000482563 FAT2Q9NYQ8 4349 aa1.46□□□□□ -2.18
RBM39-233ENST00000482563 SPINK1P00995 79 aa1.44□□□□□ -2.18
RBM39-233ENST00000482563 FAM208AQ9UK61 1670 aaKnown RBP1.44□□□□□ -2.18
RBM39-233ENST00000482563 DDX60Q8IY21 1712 aaKnown RBP1.44□□□□□ -2.18
RBM39-233ENST00000482563 PCNX1Q96RV3 2341 aa1.43□□□□□ -2.18
RBM39-233ENST00000482563 TNXBP22105 4242 aa1.43□□□□□ -2.18
RBM39-233ENST00000482563 WT1-ASQ06250 92 aa1.43□□□□□ -2.18
RBM39-233ENST00000482563 CHD8Q9HCK8 2581 aa1.42□□□□□ -2.18
RBM39-233ENST00000482563 HECTD1Q9ULT8 2610 aa1.42□□□□□ -2.18
RBM39-233ENST00000482563 PRKDCP78527 4128 aaKnown RBP1.41□□□□□ -2.18
RBM39-233ENST00000482563 TFF3Q07654 80 aa1.4□□□□□ -2.18
RBM39-233ENST00000482563 PKD1L1Q8TDX9 2849 aa1.39□□□□□ -2.19
RBM39-233ENST00000482563 S4R3F8 94 aa1.39□□□□□ -2.19
RBM39-233ENST00000482563 NFAT5O94916 1531 aa1.38□□□□□ -2.19
RBM39-233ENST00000482563 CELSR1Q9NYQ6 3014 aa1.37□□□□□ -2.19
RBM39-233ENST00000482563 U3KQA8 63 aa1.37□□□□□ -2.19
RBM39-233ENST00000482563 TNRC18O15417 2968 aaPredicted RBP1.33□□□□□ -2.2
RBM39-233ENST00000482563 MUC5BQ9HC84 5762 aaPredicted RBP1.33□□□□□ -2.2
RBM39-233ENST00000482563 PRM1P04553 51 aa1.33□□□□□ -2.2
RBM39-233ENST00000482563 DEFB106AQ8N104 65 aa1.31□□□□□ -2.2
RBM39-233ENST00000482563 CRCT1Q9UGL9 99 aa1.31□□□□□ -2.2
RBM39-233ENST00000482563 KIF21BO75037 1637 aa1.3□□□□□ -2.2
RBM39-233ENST00000482563 SYNE1Q8NF91 8797 aaKnown RBP1.29□□□□□ -2.2
RBM39-233ENST00000482563 M0R2T5 61 aa1.29□□□□□ -2.2
RBM39-233ENST00000482563 DEFB135Q30KP9 77 aa1.29□□□□□ -2.2
RBM39-233ENST00000482563 CEP290O15078 2479 aa1.28□□□□□ -2.21
RBM39-233ENST00000482563 EP300Q09472 2414 aaPredicted RBP1.27□□□□□ -2.21
RBM39-233ENST00000482563 HUWE1Q7Z6Z7 4374 aaKnown RBP1.27□□□□□ -2.21
RBM39-233ENST00000482563 KRTAP4-1Q9BYQ7 146 aa1.27□□□□□ -2.21
RBM39-233ENST00000482563 PTPN13Q12923 2485 aa1.27□□□□□ -2.21
RBM39-233ENST00000482563 PRLHP81277 87 aa1.26□□□□□ -2.21
RBM39-233ENST00000482563 SETXQ7Z333 2677 aaKnown RBP1.26□□□□□ -2.21
RBM39-233ENST00000482563 FCGBPQ9Y6R7 5405 aaPredicted RBP1.25□□□□□ -2.21
RBM39-233ENST00000482563 MAP1BP46821 2468 aaKnown RBP1.23□□□□□ -2.21
RBM39-233ENST00000482563 SMIM2Q9BVW6 85 aa1.23□□□□□ -2.21
RBM39-233ENST00000482563 UBR5O95071 2799 aaPredicted RBP1.22□□□□□ -2.21
RBM39-233ENST00000482563 KAAG1Q9UBP8 84 aa1.22□□□□□ -2.21
RBM39-233ENST00000482563 ATP7AQ04656 1500 aa1.22□□□□□ -2.21
RBM39-233ENST00000482563 LYSTQ99698 3801 aa1.21□□□□□ -2.22
RBM39-233ENST00000482563 PKD1L2Q7Z442 2459 aa1.21□□□□□ -2.22
RBM39-233ENST00000482563 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
RBM39-233ENST00000482563 WFDC10BQ8IUB3 73 aa1.2□□□□□ -2.22
RBM39-233ENST00000482563 H3BUA1 57 aa1.2□□□□□ -2.22
RBM39-233ENST00000482563 CREBBPQ92793 2442 aa1.2□□□□□ -2.22
RBM39-233ENST00000482563 USP24Q9UPU5 2620 aa1.2□□□□□ -2.22
RBM39-233ENST00000482563 NAV2Q8IVL1 2488 aa1.19□□□□□ -2.22
RBM39-233ENST00000482563 LRP1Q07954 4544 aaKnown RBP1.19□□□□□ -2.22
RBM39-233ENST00000482563 NBASA2RRP1 2371 aa1.17□□□□□ -2.22
RBM39-233ENST00000482563 PDZD2O15018 2839 aa1.16□□□□□ -2.22
RBM39-233ENST00000482563 CACNA1AO00555 2505 aa1.14□□□□□ -2.23
RBM39-233ENST00000482563 H0YGG7 62 aa1.14□□□□□ -2.23
RBM39-233ENST00000482563 TRPM2O94759 1503 aa1.13□□□□□ -2.23
RBM39-233ENST00000482563 AHNAKQ09666 5890 aaKnown RBP1.13□□□□□ -2.23
RBM39-233ENST00000482563 WNK1Q9H4A3 2382 aa1.13□□□□□ -2.23
RBM39-233ENST00000482563 SRRM2Q9UQ35 2752 aaKnown RBP1.12□□□□□ -2.23
RBM39-233ENST00000482563 NSD1Q96L73 2696 aaPredicted RBP1.12□□□□□ -2.23
RBM39-233ENST00000482563 A0A0C4DFX4 3053 aa1.12□□□□□ -2.23
RBM39-233ENST00000482563 NF1P21359 2839 aa1.11□□□□□ -2.23
RBM39-233ENST00000482563 KMT2AQ03164 3969 aa1.1□□□□□ -2.23
RBM39-233ENST00000482563 HIVEP3Q5T1R4 2406 aa1.1□□□□□ -2.23
RBM39-233ENST00000482563 MYCBP2O75592 4640 aa1.1□□□□□ -2.23
RBM39-233ENST00000482563 SAMD9LQ8IVG5 1584 aa1.09□□□□□ -2.23
RBM39-233ENST00000482563 NCOR2Q9Y618 2525 aa1.09□□□□□ -2.23
RBM39-233ENST00000482563 ACANP16112 2415 aa1.09□□□□□ -2.24
RBM39-233ENST00000482563 NDUFA1O15239 70 aa1.09□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms