RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 CCL22O00626 93 aa1.08□□□□□ -2.24
SF3B1-210ENST00000482158 LELP1Q5T871 98 aa1.08□□□□□ -2.24
SF3B1-210ENST00000482158 TMEM167BQ9NRX6 74 aa1.08□□□□□ -2.24
SF3B1-210ENST00000482158 SPTBN2O15020 2390 aa1.08□□□□□ -2.24
SF3B1-210ENST00000482158 ALMS1Q8TCU4 4167 aa1.08□□□□□ -2.24
SF3B1-210ENST00000482158 USF3Q68DE3 2245 aa1.08□□□□□ -2.24
SF3B1-210ENST00000482158 LINC00308Q8TCZ7 52 aa1.07□□□□□ -2.24
SF3B1-210ENST00000482158 PTPRQQ9UMZ3 2332 aa1.07□□□□□ -2.24
SF3B1-210ENST00000482158 TFF3Q07654 80 aa1.06□□□□□ -2.24
SF3B1-210ENST00000482158 PRO0255Q9UI72 69 aa1.06□□□□□ -2.24
SF3B1-210ENST00000482158 SPTBN4Q9H254 2564 aa1.06□□□□□ -2.24
SF3B1-210ENST00000482158 HTTP42858 3142 aa1.06□□□□□ -2.24
SF3B1-210ENST00000482158 RANBP2P49792 3224 aaKnown RBP1.05□□□□□ -2.24
SF3B1-210ENST00000482158 BRCA2P51587 3418 aa1.05□□□□□ -2.24
SF3B1-210ENST00000482158 LAMA2P24043 3122 aaKnown RBP1.05□□□□□ -2.24
SF3B1-210ENST00000482158 APC2O95996 2303 aa1.05□□□□□ -2.24
SF3B1-210ENST00000482158 CEP250Q9BV73 2442 aa1.05□□□□□ -2.24
SF3B1-210ENST00000482158 PCNX1Q96RV3 2341 aa1.04□□□□□ -2.24
SF3B1-210ENST00000482158 MAP1BP46821 2468 aaKnown RBP1.04□□□□□ -2.24
SF3B1-210ENST00000482158 FASNP49327 2511 aaKnown RBP1.04□□□□□ -2.24
SF3B1-210ENST00000482158 SPRR1AP35321 89 aa1.04□□□□□ -2.24
SF3B1-210ENST00000482158 SPINK9Q5DT21 86 aa1.04□□□□□ -2.24
SF3B1-210ENST00000482158 BDP1A6H8Y1 2624 aa1.04□□□□□ -2.24
SF3B1-210ENST00000482158 SZT2Q5T011 3432 aa1.04□□□□□ -2.24
SF3B1-210ENST00000482158 SPTA1P02549 2419 aa1.04□□□□□ -2.24
SF3B1-210ENST00000482158 ACACBO00763 2458 aa1.04□□□□□ -2.24
SF3B1-210ENST00000482158 PIEZO2Q9H5I5 2752 aa1.03□□□□□ -2.24
SF3B1-210ENST00000482158 UNC80Q8N2C7 3258 aa1.03□□□□□ -2.24
SF3B1-210ENST00000482158 LAMA3Q16787 3333 aa1.03□□□□□ -2.24
SF3B1-210ENST00000482158 SPTBN1Q01082 2364 aaKnown RBP1.03□□□□□ -2.24
SF3B1-210ENST00000482158 CREBBPQ92793 2442 aa1.03□□□□□ -2.24
SF3B1-210ENST00000482158 CD52P31358 61 aa1.03□□□□□ -2.24
SF3B1-210ENST00000482158 MINOS1Q5TGZ0 78 aa1.03□□□□□ -2.24
SF3B1-210ENST00000482158 Q5VSD8 79 aa1.03□□□□□ -2.24
SF3B1-210ENST00000482158 C5orf42Q9H799 3197 aa1.02□□□□□ -2.25
SF3B1-210ENST00000482158 A0A0D9SG42 100 aa1.02□□□□□ -2.25
SF3B1-210ENST00000482158 H1FX-AS1Q4G0G2 97 aa1.02□□□□□ -2.25
SF3B1-210ENST00000482158 GVINP1Q7Z2Y8 2422 aa1.02□□□□□ -2.25
SF3B1-210ENST00000482158 SMIM2Q9BVW6 85 aa1.02□□□□□ -2.25
SF3B1-210ENST00000482158 CHD7Q9P2D1 2997 aa1.02□□□□□ -2.25
SF3B1-210ENST00000482158 C6orf48Q9UBA6 75 aa1.02□□□□□ -2.25
SF3B1-210ENST00000482158 CFAP54Q96N23 3096 aa1.02□□□□□ -2.25
SF3B1-210ENST00000482158 NBASA2RRP1 2371 aa1.01□□□□□ -2.25
SF3B1-210ENST00000482158 C2CD3Q4AC94 2353 aa1.01□□□□□ -2.25
SF3B1-210ENST00000482158 PKDREJQ9NTG1 2253 aa1.01□□□□□ -2.25
SF3B1-210ENST00000482158 AHNAK2Q8IVF2 5795 aa1.01□□□□□ -2.25
SF3B1-210ENST00000482158 EYSQ5T1H1 3165 aa1.01□□□□□ -2.25
SF3B1-210ENST00000482158 DEFB105AQ8NG35 78 aa1.01□□□□□ -2.25
SF3B1-210ENST00000482158 APLNQ9ULZ1 77 aa1.01□□□□□ -2.25
SF3B1-210ENST00000482158 TRIOO75962 3097 aa1.01□□□□□ -2.25
SF3B1-210ENST00000482158 TRANK1O15050 2925 aa1.01□□□□□ -2.25
SF3B1-210ENST00000482158 NDUFA1O15239 70 aa1□□□□□ -2.25
SF3B1-210ENST00000482158 IAPPP10997 89 aa1□□□□□ -2.25
SF3B1-210ENST00000482158 RPS27P42677 84 aaKnown RBP1□□□□□ -2.25
SF3B1-210ENST00000482158 RPS27LQ71UM5 84 aaKnown RBP1□□□□□ -2.25
SF3B1-210ENST00000482158 WDFY4Q6ZS81 3184 aa1□□□□□ -2.25
SF3B1-210ENST00000482158 REV3LO60673 3130 aa1□□□□□ -2.25
SF3B1-210ENST00000482158 CHD8Q9HCK8 2581 aa1□□□□□ -2.25
SF3B1-210ENST00000482158 PKD1L2Q7Z442 2459 aa0.99□□□□□ -2.25
SF3B1-210ENST00000482158 VCANP13611 3396 aa0.99□□□□□ -2.25
SF3B1-210ENST00000482158 SPRR1BP22528 89 aa0.99□□□□□ -2.25
SF3B1-210ENST00000482158 WFDC13Q8IUB5 93 aa0.99□□□□□ -2.25
SF3B1-210ENST00000482158 ASH1LQ9NR48 2969 aaKnown RBP0.99□□□□□ -2.25
SF3B1-210ENST00000482158 CACNA1AO00555 2505 aa0.99□□□□□ -2.25
SF3B1-210ENST00000482158 NCOR2Q9Y618 2525 aa0.99□□□□□ -2.25
SF3B1-210ENST00000482158 NAV2Q8IVL1 2488 aa0.99□□□□□ -2.25
SF3B1-210ENST00000482158 HIVEP3Q5T1R4 2406 aa0.99□□□□□ -2.25
SF3B1-210ENST00000482158 ZFYVE26Q68DK2 2539 aa0.98□□□□□ -2.25
SF3B1-210ENST00000482158 ZNF462Q96JM2 2506 aa0.98□□□□□ -2.25
SF3B1-210ENST00000482158 SPTAN1Q13813 2472 aaKnown RBP0.98□□□□□ -2.25
SF3B1-210ENST00000482158 VPS13AQ96RL7 3174 aa0.98□□□□□ -2.25
SF3B1-210ENST00000482158 CDH23Q9H251 3354 aa0.98□□□□□ -2.25
SF3B1-210ENST00000482158 MUC3AQ02505 3323 aa0.98□□□□□ -2.25
SF3B1-210ENST00000482158 DCHS1Q96JQ0 3298 aa0.98□□□□□ -2.25
SF3B1-210ENST00000482158 DEFB130BP0DP73 79 aa0.98□□□□□ -2.25
SF3B1-210ENST00000482158 DEFB130AP0DP74 79 aa0.98□□□□□ -2.25
SF3B1-210ENST00000482158 DEFB124Q8NES8 71 aa0.98□□□□□ -2.25
SF3B1-210ENST00000482158 PTPN13Q12923 2485 aa0.98□□□□□ -2.25
SF3B1-210ENST00000482158 CHD9Q3L8U1 2897 aa0.98□□□□□ -2.25
SF3B1-210ENST00000482158 EPG5Q9HCE0 2579 aa0.98□□□□□ -2.25
SF3B1-210ENST00000482158 MYO18BQ8IUG5 2567 aa0.97□□□□□ -2.25
SF3B1-210ENST00000482158 DMXL1Q9Y485 3027 aa0.97□□□□□ -2.25
SF3B1-210ENST00000482158 AKAP6Q13023 2319 aa0.97□□□□□ -2.25
SF3B1-210ENST00000482158 WNK2Q9Y3S1 2297 aa0.96□□□□□ -2.26
SF3B1-210ENST00000482158 ANKRD11Q6UB99 2663 aaPredicted RBP0.96□□□□□ -2.26
SF3B1-210ENST00000482158 KLK9Q2XQG4 91 aa0.96□□□□□ -2.26
SF3B1-210ENST00000482158 XIRP2A4UGR9 3374 aa0.96□□□□□ -2.26
SF3B1-210ENST00000482158 DOPEY1Q5JWR5 2465 aa0.96□□□□□ -2.26
SF3B1-210ENST00000482158 ZNF292O60281 2723 aa0.95□□□□□ -2.26
SF3B1-210ENST00000482158 SPG11Q96JI7 2443 aa0.95□□□□□ -2.26
SF3B1-210ENST00000482158 CFAP47Q6ZTR5 3102 aa0.95□□□□□ -2.26
SF3B1-210ENST00000482158 LAMA1P25391 3075 aa0.95□□□□□ -2.26
SF3B1-210ENST00000482158 IGF2RP11717 2491 aa0.95□□□□□ -2.26
SF3B1-210ENST00000482158 FLNBO75369 2602 aaKnown RBP0.95□□□□□ -2.26
SF3B1-210ENST00000482158 WDR87Q6ZQQ6 2873 aa0.94□□□□□ -2.26
SF3B1-210ENST00000482158 MYO9AB2RTY4 2548 aa0.94□□□□□ -2.26
SF3B1-210ENST00000482158 DMXL2Q8TDJ6 3036 aa0.94□□□□□ -2.26
SF3B1-210ENST00000482158 USP34Q70CQ2 3546 aa0.94□□□□□ -2.26
SF3B1-210ENST00000482158 CFAP46Q8IYW2 2715 aa0.94□□□□□ -2.26
SF3B1-210ENST00000482158 KRTAP19-3Q7Z4W3 81 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms